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The map label for this gene is 116623378

Identifier: 116623378

GI number: 116623378

Start: 5431238

End: 5431753

Strand: Reverse

Name: 116623378

Synonym: Acid_4287

Alternate gene names: NA

Gene position: 5431753-5431238 (Counterclockwise)

Preceding gene: 116623380

Following gene: 116623377

Centisome position: 54.5

GC content: 63.95

Gene sequence:

>516_bases
GTGAAGCCGGCAGGGCAGGCAAGCACTAACACAACCGGGGCGAGGTCATCCAGGCCCCGTCGCAGCGCCCGCCCCGTACC
ACCGCCACCGCCTCTGCTCCAAGCGACTCGGCCTGCCCGGCGGCTTCACCGTCTAGCGCCGAATCCACCTCCAACCGCTT
TCCCGGACGTCCAATTCACCGAAAAACGGACACCTCCCAGCCCACGCTCGGCCTCCCCGACCCGAACATCGCTGGTACCC
TCGCCGCCGAGCAGTCCGGCCTCCCCGTTACCGGCTACGTCTTCCAGCAGAAGTGGTTCGACGCCTGCAAAGGTTAAGTC
CAACAACGTCGTCCACGGCACCAAGACGCATCGCGACTTCGATTACAGCGGCACTATGATCGACCAAATGCTCCCAAGCC
TGATCGCCCACCGCACCGGCAAGAAGCTCGGCTACGACCTAAAGACCGGCCGGTCACCAACTTCGCCGAAGCCAACGATT
GGCTCAAGAGGACTTACAGGGCGGGTTGGACGCTGA

Upstream 100 bases:

>100_bases
AGAATCGCCGCAGGGACGCAGAACTTTCGCATCTCGTCTATCTCCTTATCCGCACTTATACCCGGGATTCGGAGTCACTC
GTGATGACGCAAAATCTTGG

Downstream 100 bases:

>100_bases
ACGGGTAACGTAAGGCAAGTTCGCCGATCGATGGCAAGATCCTACGTGTAAGGTGAGGGTGTGTCGCCTTGTGTCTGGCC
GTACGACGTGGCCCGCTTGA

Product: serine/arginine repetitive matrix 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKPAGQASTNTTGARSSRPRRSARPVPPPPPLLQATRPARRLHRLAPNPPPTAFPDVQFTEKRTPPSPRSASPTRTSLVP
SPPSSPASPLPATSSSRSGSTPAKVKSNNVVHGTKTHRDFDYSGTMIDQMLPSLIAHRTGKKLGYDLKTGRSPTSPKPTI
GSRGLTGRVGR

Sequences:

>Translated_171_residues
MKPAGQASTNTTGARSSRPRRSARPVPPPPPLLQATRPARRLHRLAPNPPPTAFPDVQFTEKRTPPSPRSASPTRTSLVP
SPPSSPASPLPATSSSRSGSTPAKVKSNNVVHGTKTHRDFDYSGTMIDQMLPSLIAHRTGKKLGYDLKTGRSPTSPKPTI
GSRGLTGRVGR
>Mature_171_residues
MKPAGQASTNTTGARSSRPRRSARPVPPPPPLLQATRPARRLHRLAPNPPPTAFPDVQFTEKRTPPSPRSASPTRTSLVP
SPPSSPASPLPATSSSRSGSTPAKVKSNNVVHGTKTHRDFDYSGTMIDQMLPSLIAHRTGKKLGYDLKTGRSPTSPKPTI
GSRGLTGRVGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18150; Mature: 18150

Theoretical pI: Translated: 12.56; Mature: 12.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAGQASTNTTGARSSRPRRSARPVPPPPPLLQATRPARRLHRLAPNPPPTAFPDVQFT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEC
EKRTPPSPRSASPTRTSLVPSPPSSPASPLPATSSSRSGSTPAKVKSNNVVHGTKTHRDF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCC
DYSGTMIDQMLPSLIAHRTGKKLGYDLKTGRSPTSPKPTIGSRGLTGRVGR
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPAGQASTNTTGARSSRPRRSARPVPPPPPLLQATRPARRLHRLAPNPPPTAFPDVQFT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEC
EKRTPPSPRSASPTRTSLVPSPPSSPASPLPATSSSRSGSTPAKVKSNNVVHGTKTHRDF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCC
DYSGTMIDQMLPSLIAHRTGKKLGYDLKTGRSPTSPKPTIGSRGLTGRVGR
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA