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The map label for this gene is yfbL [C]

Identifier: 116623369

GI number: 116623369

Start: 5418873

End: 5420630

Strand: Reverse

Name: yfbL [C]

Synonym: Acid_4278

Alternate gene names: 116623369

Gene position: 5420630-5418873 (Counterclockwise)

Preceding gene: 116623370

Following gene: 116623367

Centisome position: 54.39

GC content: 64.11

Gene sequence:

>1758_bases
ATGGCGGCCGCTCCTAAGTACCGTATGACGTTTTTGTACATGGTTGCCTGCTCCTTTCGGGCGGATGGGCCCTCCCGCCC
ACGACAGAGTATATGCCCGAGGGGGTGTTCACAGGCTGCAGCCCGCGCTATTCTTACAAGCGAACCAATGACACAATTTA
AGGTCTTCTTATCTCGTATAAGGCTCGTCTCGGCACTGCTGCTGGCGCTGGCGATTCCCGCGCGTTCTTCCGAAGCCGGC
AAGCTCGCCGATGAAGTCATCCAATCCAGCTACACCCACTATTTGAGAAACGTCCTGCATACCCACGGCGGAGACAGTCG
CGGCCCCGGTGCGCCGCAGCACGATGACGCGCGGAGTCGCATCGCCGCCGCGCTTGCCGGCCAGGGATTGAGCGTGACCC
TGCACGCCTTTCAGTGGCGCGGCGATACCTACTACAACGTGGTCGGCAAACTGACCGGCAAGACCCGGCCCGACGAATAC
TACGTGCTCGGCGCGCATTACGATTCGAAGAGCACGCCGGGCGCCGACGATGACGGCAGCGGCGTCGCCGCCCTGCTCGA
AACCGCGCGCGTCGCCTCGACTCACGATTTCGAATCGTCGATCCTGTTCATCGCCTTCGACCTGGAAGAGCCGGGCCTCA
TCGGTAGCAAAGCCTGGGTGGCGGACCACCCCTCCGAGCGCATCGCCGGCATGATCGCGATGGACCAGATCTCATTCAAC
TGGCCCGGGACCACTCATAATCTGATCGCGATCTGCCCGCCGAATACAGAAGCGAACCCCACCCGCACGGCCTTCGAAAA
TGCCGTGCGGAGTTACAGCGGCGGACTGACGCCGGTGTATGGCGGCGTCACCTCCACCAGCGACCACGCGCCGTTTGCCG
CGCTCACGTCGGCCATCTCGACGGTGGAAGCCAGCTGGTCCTACAACACCAGAATGCACACCATGGCGGATTCGGTGGAC
GAAGAGGGCTATATCGATTACGTATTCGCCACGCGTGTAACCCGTTCCGTGGCGGCTTGGCTGGCTGCACAGGCCGGCGT
CATACCGGATGGGGCCAACGAAATGCGCCTGCGGCCCGGCGGCATTCTGAACGCCTCGAATTTCGTCAGCGGCGTGGCCG
CGGCCTCCGAGTTGATTACCCTCAAAGGTTCCGGATTCACTGATCCCTCCGGCCCGACTACGGTCTCCCTCCGCGACATC
GCGGGCGCACCTTACTCGGCGGAGTTGATCTATGCGTCGGCGGCGCAGCTCAACCTCGTGCTGCCTGCGGGGCTTCCCGC
CGGCCGCGCTACCCTGACGGTGACCCGCGGAGATGCCCTCCAACAATCCGCCGCATTGACCATCGGTCCGATCTCCCCCG
GCATCTTCACCGCGGATGCGACCGGCCTTGGCCTGGCGGCGGCGCACGCGATCCGCGTCTCGCCCGATGGCTCGCAGTCT
GTCCAGAATGTCTCCGATTGCTCCACCGGCATCTGCACCCCCGTTCCCATCGCTTTCGGCGCCCCGGACGATCGCATTGT
CCTGGTCCTCTACGGCACGGGAATTCGCGGCCGGAGCGGGTTGGCGGGCGTCCATGCGACCGTCGGCACTCTCACGCTCC
CGTGCCAGTTCGCCGGACCCCATTCGCTTTATCCGGGCCTGGATCAGATCAACATCGAACTCCCTCGCAGCCTGCGGGGC
CGGGGACCGCTGCCGGTGGAACTCAACGTGGATGGCTCCGCTTCGACACCCGTGATCATTTACCTGGGTGCGGACTAG

Upstream 100 bases:

>100_bases
GACGGAAAAGGTTTGAGCACCGGCGGCAGTGCTGCAGTTGAAACCTGCCGAATGCAAAGTGATCGAGCTTGGTATCTGCG
CTTGAACAGAGGCGGCCAGG

Downstream 100 bases:

>100_bases
ATCCTCGCGTACGACTCCGAATCGCCCCAGTACCTATTCCAGTACTGCCCGGACTGCACAAATCCAGGGGCTGGCAGCAT
AATGTGCAACATGGAGCCGA

Product: peptidase M28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MAAAPKYRMTFLYMVACSFRADGPSRPRQSICPRGCSQAAARAILTSEPMTQFKVFLSRIRLVSALLLALAIPARSSEAG
KLADEVIQSSYTHYLRNVLHTHGGDSRGPGAPQHDDARSRIAAALAGQGLSVTLHAFQWRGDTYYNVVGKLTGKTRPDEY
YVLGAHYDSKSTPGADDDGSGVAALLETARVASTHDFESSILFIAFDLEEPGLIGSKAWVADHPSERIAGMIAMDQISFN
WPGTTHNLIAICPPNTEANPTRTAFENAVRSYSGGLTPVYGGVTSTSDHAPFAALTSAISTVEASWSYNTRMHTMADSVD
EEGYIDYVFATRVTRSVAAWLAAQAGVIPDGANEMRLRPGGILNASNFVSGVAAASELITLKGSGFTDPSGPTTVSLRDI
AGAPYSAELIYASAAQLNLVLPAGLPAGRATLTVTRGDALQQSAALTIGPISPGIFTADATGLGLAAAHAIRVSPDGSQS
VQNVSDCSTGICTPVPIAFGAPDDRIVLVLYGTGIRGRSGLAGVHATVGTLTLPCQFAGPHSLYPGLDQINIELPRSLRG
RGPLPVELNVDGSASTPVIIYLGAD

Sequences:

>Translated_585_residues
MAAAPKYRMTFLYMVACSFRADGPSRPRQSICPRGCSQAAARAILTSEPMTQFKVFLSRIRLVSALLLALAIPARSSEAG
KLADEVIQSSYTHYLRNVLHTHGGDSRGPGAPQHDDARSRIAAALAGQGLSVTLHAFQWRGDTYYNVVGKLTGKTRPDEY
YVLGAHYDSKSTPGADDDGSGVAALLETARVASTHDFESSILFIAFDLEEPGLIGSKAWVADHPSERIAGMIAMDQISFN
WPGTTHNLIAICPPNTEANPTRTAFENAVRSYSGGLTPVYGGVTSTSDHAPFAALTSAISTVEASWSYNTRMHTMADSVD
EEGYIDYVFATRVTRSVAAWLAAQAGVIPDGANEMRLRPGGILNASNFVSGVAAASELITLKGSGFTDPSGPTTVSLRDI
AGAPYSAELIYASAAQLNLVLPAGLPAGRATLTVTRGDALQQSAALTIGPISPGIFTADATGLGLAAAHAIRVSPDGSQS
VQNVSDCSTGICTPVPIAFGAPDDRIVLVLYGTGIRGRSGLAGVHATVGTLTLPCQFAGPHSLYPGLDQINIELPRSLRG
RGPLPVELNVDGSASTPVIIYLGAD
>Mature_584_residues
AAAPKYRMTFLYMVACSFRADGPSRPRQSICPRGCSQAAARAILTSEPMTQFKVFLSRIRLVSALLLALAIPARSSEAGK
LADEVIQSSYTHYLRNVLHTHGGDSRGPGAPQHDDARSRIAAALAGQGLSVTLHAFQWRGDTYYNVVGKLTGKTRPDEYY
VLGAHYDSKSTPGADDDGSGVAALLETARVASTHDFESSILFIAFDLEEPGLIGSKAWVADHPSERIAGMIAMDQISFNW
PGTTHNLIAICPPNTEANPTRTAFENAVRSYSGGLTPVYGGVTSTSDHAPFAALTSAISTVEASWSYNTRMHTMADSVDE
EGYIDYVFATRVTRSVAAWLAAQAGVIPDGANEMRLRPGGILNASNFVSGVAAASELITLKGSGFTDPSGPTTVSLRDIA
GAPYSAELIYASAAQLNLVLPAGLPAGRATLTVTRGDALQQSAALTIGPISPGIFTADATGLGLAAAHAIRVSPDGSQSV
QNVSDCSTGICTPVPIAFGAPDDRIVLVLYGTGIRGRSGLAGVHATVGTLTLPCQFAGPHSLYPGLDQINIELPRSLRGR
GPLPVELNVDGSASTPVIIYLGAD

Specific function: Unknown

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M28 family. M28E subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012189
- InterPro:   IPR007280
- InterPro:   IPR007484 [H]

Pfam domain/function: PF04389 Peptidase_M28; PF04151 PPC [H]

EC number: =3.4.11.10 [H]

Molecular weight: Translated: 61243; Mature: 61111

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAPKYRMTFLYMVACSFRADGPSRPRQSICPRGCSQAAARAILTSEPMTQFKVFLSRI
CCCCCCHHHHEEEEEHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RLVSALLLALAIPARSSEAGKLADEVIQSSYTHYLRNVLHTHGGDSRGPGAPQHDDARSR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
IAAALAGQGLSVTLHAFQWRGDTYYNVVGKLTGKTRPDEYYVLGAHYDSKSTPGADDDGS
HHHHHHCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCC
GVAALLETARVASTHDFESSILFIAFDLEEPGLIGSKAWVADHPSERIAGMIAMDQISFN
HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCHHHHHEEEEEEEEEEC
WPGTTHNLIAICPPNTEANPTRTAFENAVRSYSGGLTPVYGGVTSTSDHAPFAALTSAIS
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHH
TVEASWSYNTRMHTMADSVDEEGYIDYVFATRVTRSVAAWLAAQAGVIPDGANEMRLRPG
HHCCCCCCCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCC
GILNASNFVSGVAAASELITLKGSGFTDPSGPTTVSLRDIAGAPYSAELIYASAAQLNLV
CCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEHHHCCCCCCEEEEEEECCEEEEE
LPAGLPAGRATLTVTRGDALQQSAALTIGPISPGIFTADATGLGLAAAHAIRVSPDGSQS
EECCCCCCCEEEEEECCCHHHHCCCEEEECCCCCEEECCCCCCCEEEEEEEEECCCCCHH
VQNVSDCSTGICTPVPIAFGAPDDRIVLVLYGTGIRGRSGLAGVHATVGTLTLPCQFAGP
HHHHHHCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCEEEECEEEEEEECCCC
HSLYPGLDQINIELPRSLRGRGPLPVELNVDGSASTPVIIYLGAD
CCCCCCCCEEEEECCHHHCCCCCCCEEEECCCCCCCCEEEEECCC
>Mature Secondary Structure 
AAAPKYRMTFLYMVACSFRADGPSRPRQSICPRGCSQAAARAILTSEPMTQFKVFLSRI
CCCCCHHHHEEEEEHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RLVSALLLALAIPARSSEAGKLADEVIQSSYTHYLRNVLHTHGGDSRGPGAPQHDDARSR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
IAAALAGQGLSVTLHAFQWRGDTYYNVVGKLTGKTRPDEYYVLGAHYDSKSTPGADDDGS
HHHHHHCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCC
GVAALLETARVASTHDFESSILFIAFDLEEPGLIGSKAWVADHPSERIAGMIAMDQISFN
HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCHHHHHEEEEEEEEEEC
WPGTTHNLIAICPPNTEANPTRTAFENAVRSYSGGLTPVYGGVTSTSDHAPFAALTSAIS
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHH
TVEASWSYNTRMHTMADSVDEEGYIDYVFATRVTRSVAAWLAAQAGVIPDGANEMRLRPG
HHCCCCCCCCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCC
GILNASNFVSGVAAASELITLKGSGFTDPSGPTTVSLRDIAGAPYSAELIYASAAQLNLV
CCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEHHHCCCCCCEEEEEEECCEEEEE
LPAGLPAGRATLTVTRGDALQQSAALTIGPISPGIFTADATGLGLAAAHAIRVSPDGSQS
EECCCCCCCEEEEEECCCHHHHCCCEEEECCCCCEEECCCCCCCEEEEEEEEECCCCCHH
VQNVSDCSTGICTPVPIAFGAPDDRIVLVLYGTGIRGRSGLAGVHATVGTLTLPCQFAGP
HHHHHHCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCEEEECEEEEEEECCCC
HSLYPGLDQINIELPRSLRGRGPLPVELNVDGSASTPVIIYLGAD
CCCCCCCCEEEEECCHHHCCCCCCCEEEECCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1627651; 1569090; 1550363; 8087555; 8647077; 10413478; 11401547 [H]