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The map label for this gene is 116623288

Identifier: 116623288

GI number: 116623288

Start: 5320078

End: 5321286

Strand: Reverse

Name: 116623288

Synonym: Acid_4195

Alternate gene names: NA

Gene position: 5321286-5320078 (Counterclockwise)

Preceding gene: 116623289

Following gene: 116623287

Centisome position: 53.4

GC content: 61.87

Gene sequence:

>1209_bases
ATGTGGGCCATCGCGGCTTTTTTCCTGCTCTACCAGGCTGACTTTACCTCCGAGGGCATGAAAGCCCTCGATGAGGGCAA
GTACGAATCCGCGGCCCAGGCGTTTACCAAGGCGATTGCGGCGGACGCCAAAGATTACTTCGCGCACTTCAACCTGGCGA
TGGCGTACACGCTACTCCACAAAGATACGGAGGCCTCTGCCGAGTATCGCAAGACACTGGAGTTGAAGCCGGGTTTGTAC
GAGGCGGAATTAAACGGCGGCATCGTGCTGCTGCGCCAGCAGAATCCTGCCGAGGCGCTGCCGCTGTTCGAAGATGCCGC
GCGGCAGAAGCCGCAGGAATTTCGGCCGCGTTACTATCTGGCCGAGTCGCAGTTGCAGACCGGCGATTATGCCAAAGCCG
AGGAGAGTTATAAGCTGGCGATCGGGTTGGACGCGAAATCGTCCGGCGCGCAGTTGGGCATGGCCCGAGCGCTAGTGCAG
GAAGGCAAAGTTGCGGATGCGGAGGTCTATTTTCGCAAGGCCGCCGAGCTTGAGCCGAAGTACCGCGAGTACCTTCTGCA
GCTTGCCGGGCTTTATGAGAAGGGCGGGCAGACCGCGGAAGCCATCGCGATTTATCGCGAGTTCCCGGAGAATGGCGCCG
CGCAGGCTCGTTTGGGCGAGCTGCTGCTCGAGGAGCGTAAGTTCGAGGATGCGGTGCCGCGGCTCGAGGAGGCTTACGGC
AAGGACCCCAGCCCCGGCAATCGCAGCGCCCTGGCGGCGGCCTATGTGTTCACTCGCAAGCTGGATAAGGCATTGCCCCT
GCTCGAGCAGTGCGTGGCGGCGGCCCCGGCGGATTACGACACGCGCATGATGTACGCGCGCGCGCTGCGCGACAAGCGGC
AGTTCCCGGCGGCGGCGCGGCAGTTTTACGAGGCCACGAAATTAAAGCCCGGCGAGCCCAAAGGCTGGACCGAGCTCGGC
GATATGCTGTACATGGCCGGCGATTTGCCGCAGGCATTGGGGGCCTTTGAACAGGCCGCGAAGTTTGGGGAAAATTCGGC
GGGGAACTGGTTCCTGCGCGCGATCATTCTGGATAAGCTGCGCCAGGTGAAGCCGGCGAAGGAAGCTTACGAGCACTTCC
TGGCATTGAGCCAGGGGAAGAATCCGGATCAGGAATTCCAGGCGCGCCAGCGGGCGCGTATTTTGCAGAGAGAGTTGGAC
AAACGGTGA

Upstream 100 bases:

>100_bases
GCGGAGACGCCCGAAATCGTGACTCCGGGCCTCGGCAAAGAGGAAAAGAAGTAACCGCTGCTGACGGCCGCGAGCGAGTG
CAGGGCGATAGAATTGAAGC

Downstream 100 bases:

>100_bases
CGGGAAGCAAAATCATCCTACTGCTGGCGGCCCTGACGCTCGGGACAGGGGCCATGCTGCACGCCGACTTGAAGACCGCG
CTCAACGAGCATGATCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; Sulfotransferase; TPR Domain Protein; Tetratricopeptide Repeat Domain Protein; TPR Domain-Containing Protein; TPR-Repeat-Containing Protein; Intermediate Filament Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; O-Linked GlcNAc Transferase; Glycosyl Transferase Family Protein

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MWAIAAFFLLYQADFTSEGMKALDEGKYESAAQAFTKAIAADAKDYFAHFNLAMAYTLLHKDTEASAEYRKTLELKPGLY
EAELNGGIVLLRQQNPAEALPLFEDAARQKPQEFRPRYYLAESQLQTGDYAKAEESYKLAIGLDAKSSGAQLGMARALVQ
EGKVADAEVYFRKAAELEPKYREYLLQLAGLYEKGGQTAEAIAIYREFPENGAAQARLGELLLEERKFEDAVPRLEEAYG
KDPSPGNRSALAAAYVFTRKLDKALPLLEQCVAAAPADYDTRMMYARALRDKRQFPAAARQFYEATKLKPGEPKGWTELG
DMLYMAGDLPQALGAFEQAAKFGENSAGNWFLRAIILDKLRQVKPAKEAYEHFLALSQGKNPDQEFQARQRARILQRELD
KR

Sequences:

>Translated_402_residues
MWAIAAFFLLYQADFTSEGMKALDEGKYESAAQAFTKAIAADAKDYFAHFNLAMAYTLLHKDTEASAEYRKTLELKPGLY
EAELNGGIVLLRQQNPAEALPLFEDAARQKPQEFRPRYYLAESQLQTGDYAKAEESYKLAIGLDAKSSGAQLGMARALVQ
EGKVADAEVYFRKAAELEPKYREYLLQLAGLYEKGGQTAEAIAIYREFPENGAAQARLGELLLEERKFEDAVPRLEEAYG
KDPSPGNRSALAAAYVFTRKLDKALPLLEQCVAAAPADYDTRMMYARALRDKRQFPAAARQFYEATKLKPGEPKGWTELG
DMLYMAGDLPQALGAFEQAAKFGENSAGNWFLRAIILDKLRQVKPAKEAYEHFLALSQGKNPDQEFQARQRARILQRELD
KR
>Mature_402_residues
MWAIAAFFLLYQADFTSEGMKALDEGKYESAAQAFTKAIAADAKDYFAHFNLAMAYTLLHKDTEASAEYRKTLELKPGLY
EAELNGGIVLLRQQNPAEALPLFEDAARQKPQEFRPRYYLAESQLQTGDYAKAEESYKLAIGLDAKSSGAQLGMARALVQ
EGKVADAEVYFRKAAELEPKYREYLLQLAGLYEKGGQTAEAIAIYREFPENGAAQARLGELLLEERKFEDAVPRLEEAYG
KDPSPGNRSALAAAYVFTRKLDKALPLLEQCVAAAPADYDTRMMYARALRDKRQFPAAARQFYEATKLKPGEPKGWTELG
DMLYMAGDLPQALGAFEQAAKFGENSAGNWFLRAIILDKLRQVKPAKEAYEHFLALSQGKNPDQEFQARQRARILQRELD
KR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=314, Percent_Identity=26.4331210191083, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI32307148, Length=314, Percent_Identity=26.4331210191083, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115532692, Length=308, Percent_Identity=24.3506493506494, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=308, Percent_Identity=24.3506493506494, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17647755, Length=314, Percent_Identity=25.1592356687898, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24585827, Length=314, Percent_Identity=25.1592356687898, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24585829, Length=314, Percent_Identity=25.1592356687898, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45094; Mature: 45094

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWAIAAFFLLYQADFTSEGMKALDEGKYESAAQAFTKAIAADAKDYFAHFNLAMAYTLLH
CHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDTEASAEYRKTLELKPGLYEAELNGGIVLLRQQNPAEALPLFEDAARQKPQEFRPRYYL
CCCHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCHHHCCHHHHHHHCCCHHHCCCEEE
AESQLQTGDYAKAEESYKLAIGLDAKSSGAQLGMARALVQEGKVADAEVYFRKAAELEPK
EHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
YREYLLQLAGLYEKGGQTAEAIAIYREFPENGAAQARLGELLLEERKFEDAVPRLEEAYG
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KDPSPGNRSALAAAYVFTRKLDKALPLLEQCVAAAPADYDTRMMYARALRDKRQFPAAAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHH
QFYEATKLKPGEPKGWTELGDMLYMAGDLPQALGAFEQAAKFGENSAGNWFLRAIILDKL
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RQVKPAKEAYEHFLALSQGKNPDQEFQARQRARILQRELDKR
HHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWAIAAFFLLYQADFTSEGMKALDEGKYESAAQAFTKAIAADAKDYFAHFNLAMAYTLLH
CHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDTEASAEYRKTLELKPGLYEAELNGGIVLLRQQNPAEALPLFEDAARQKPQEFRPRYYL
CCCHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCHHHCCHHHHHHHCCCHHHCCCEEE
AESQLQTGDYAKAEESYKLAIGLDAKSSGAQLGMARALVQEGKVADAEVYFRKAAELEPK
EHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
YREYLLQLAGLYEKGGQTAEAIAIYREFPENGAAQARLGELLLEERKFEDAVPRLEEAYG
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KDPSPGNRSALAAAYVFTRKLDKALPLLEQCVAAAPADYDTRMMYARALRDKRQFPAAAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHH
QFYEATKLKPGEPKGWTELGDMLYMAGDLPQALGAFEQAAKFGENSAGNWFLRAIILDKL
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RQVKPAKEAYEHFLALSQGKNPDQEFQARQRARILQRELDKR
HHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA