| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623233
Identifier: 116623233
GI number: 116623233
Start: 5251565
End: 5252815
Strand: Reverse
Name: 116623233
Synonym: Acid_4140
Alternate gene names: NA
Gene position: 5252815-5251565 (Counterclockwise)
Preceding gene: 116623234
Following gene: 116623232
Centisome position: 52.71
GC content: 66.27
Gene sequence:
>1251_bases ATGCCGAAAACCAAAACCCCGGACCCTCGCAACCGGCCGGCGCCGGTCCGCCATGACCGTAAGCCAAAGGGTCCGACCTG GGAAGAGTGGCAGGAGCAGGTGGAGCGCGAGCGGCAGGCAGCGCTCGAGAAATACCGCCAGAACTGGGACCGCGCCCGGA ACGACTCCGCGGCGCGCCACCACTGGTCGCCGTGGCTGCTCATCCGCTACACACCGGCGGACCTGGGCGCGCGCCCAATC CCCTCCGGCGACCCGTTCTGGATCTCTCCCGATATTTGGGTGGAGTCGAGCGACCCGATGGGGAATCCCGTGGCCGGCGA GGACAATTTCATCCACGTCCGGATCTTCAACCTCGGGTCGGCGGATGCGGCGCCCGTGAAGGTGGATTTCTATTGGGCCA ATCCCGCGCTGGGCCTGGGACCGGCGAACATGAACCTGATCGGCACCGAGTGGGTGCAGGTGTATTCGCTCACGTCGAAG GACGTGCGCTGCCGGACGCCGTGGGTGCCATCGTTGAACATCGGGGCGCACCAGTGCCTGATGGTGAATTGCAGCAATCA CGTTTTCGACCCCATCATCACTCCATTCGCGCCGACGCTGGACCGCCACGTCGGGCAGCGCAACGTTCACGTTGTGGCGG CCCCCATGAACCGCATTCTCCGTTTCGACCTGGAACTGAACAACCTGTTTCCCATCGACGCCGAGGCGGAGGTCACCGCG CGCGTGGAGCATGTGGCGCTGACCGCGGCGGGGCGGCGCGCGAAGGCCCCGGAGGTGCTCGCGCAAGTGTTGGCCTTCGG CGGTTCGATCACCAACACCAAGCTCGAGATCGCGCAGCGCTACCGCCGCGGCACACGCGAATACCGGAGTTCCACGAAAG TAGCGCGTAACGCTCCGGGACAACTGGCGCCGGCGACGCTGGTGCAGGCAGCGGGCCGAAACCTCGCGGCAGTCGCTTTG ACCGCGCGCCTCGAGGAACGCTCCAGTGTGGTGGTGGGAAATGGAGGCGCACTGTTTACGGGGATGCTGGCGGCGCGGGA AGTGCTCGCGGCGCAAGGCTGCGCGGCGCCGGGGCTGACGCTCGAACGCTTCCCTATGAGAGCCTTCGAACGCCGCAAAT TGGCGCTCGAGTTAGCGGCGCCGGCCGGAGCCGCAGCCGGGGAATTCTTAGTGGTCCACCTGAACCAGACCGTGCACGGA ATTCTGATGGGCGGCTATTCGATTGTGGTGCGAGTGGAGGGCCGGGGCTGA
Upstream 100 bases:
>100_bases CGCCGACCGGGGAATGGCGTGGCTGACGTGGCAGTTCACTGCCGTTTACAGCGATCCGGTGGTGATCGAGCCGGAGCCGT AGCGGCGCGGAGGAGCAGCG
Downstream 100 bases:
>100_bases CCGGCTCCGAAAACAACAAGGAGGCAGGCTGAAAAATGCCGGAGAAAGAACGCAAATCGCCCCAGGAAACGCAGAAGCAT GATGCGGCGCTTCTGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MPKTKTPDPRNRPAPVRHDRKPKGPTWEEWQEQVERERQAALEKYRQNWDRARNDSAARHHWSPWLLIRYTPADLGARPI PSGDPFWISPDIWVESSDPMGNPVAGEDNFIHVRIFNLGSADAAPVKVDFYWANPALGLGPANMNLIGTEWVQVYSLTSK DVRCRTPWVPSLNIGAHQCLMVNCSNHVFDPIITPFAPTLDRHVGQRNVHVVAAPMNRILRFDLELNNLFPIDAEAEVTA RVEHVALTAAGRRAKAPEVLAQVLAFGGSITNTKLEIAQRYRRGTREYRSSTKVARNAPGQLAPATLVQAAGRNLAAVAL TARLEERSSVVVGNGGALFTGMLAAREVLAAQGCAAPGLTLERFPMRAFERRKLALELAAPAGAAAGEFLVVHLNQTVHG ILMGGYSIVVRVEGRG
Sequences:
>Translated_416_residues MPKTKTPDPRNRPAPVRHDRKPKGPTWEEWQEQVERERQAALEKYRQNWDRARNDSAARHHWSPWLLIRYTPADLGARPI PSGDPFWISPDIWVESSDPMGNPVAGEDNFIHVRIFNLGSADAAPVKVDFYWANPALGLGPANMNLIGTEWVQVYSLTSK DVRCRTPWVPSLNIGAHQCLMVNCSNHVFDPIITPFAPTLDRHVGQRNVHVVAAPMNRILRFDLELNNLFPIDAEAEVTA RVEHVALTAAGRRAKAPEVLAQVLAFGGSITNTKLEIAQRYRRGTREYRSSTKVARNAPGQLAPATLVQAAGRNLAAVAL TARLEERSSVVVGNGGALFTGMLAAREVLAAQGCAAPGLTLERFPMRAFERRKLALELAAPAGAAAGEFLVVHLNQTVHG ILMGGYSIVVRVEGRG >Mature_415_residues PKTKTPDPRNRPAPVRHDRKPKGPTWEEWQEQVERERQAALEKYRQNWDRARNDSAARHHWSPWLLIRYTPADLGARPIP SGDPFWISPDIWVESSDPMGNPVAGEDNFIHVRIFNLGSADAAPVKVDFYWANPALGLGPANMNLIGTEWVQVYSLTSKD VRCRTPWVPSLNIGAHQCLMVNCSNHVFDPIITPFAPTLDRHVGQRNVHVVAAPMNRILRFDLELNNLFPIDAEAEVTAR VEHVALTAAGRRAKAPEVLAQVLAFGGSITNTKLEIAQRYRRGTREYRSSTKVARNAPGQLAPATLVQAAGRNLAAVALT ARLEERSSVVVGNGGALFTGMLAAREVLAAQGCAAPGLTLERFPMRAFERRKLALELAAPAGAAAGEFLVVHLNQTVHGI LMGGYSIVVRVEGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45742; Mature: 45611
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTKTPDPRNRPAPVRHDRKPKGPTWEEWQEQVERERQAALEKYRQNWDRARNDSAARH CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC HWSPWLLIRYTPADLGARPIPSGDPFWISPDIWVESSDPMGNPVAGEDNFIHVRIFNLGS CCCCEEEEEECCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCEEEEEEEECCC ADAAPVKVDFYWANPALGLGPANMNLIGTEWVQVYSLTSKDVRCRTPWVPSLNIGAHQCL CCCCEEEEEEEECCCCCCCCCCCCCEEECCEEEEEEECCCCCEECCCCCCCCCCCCCEEE MVNCSNHVFDPIITPFAPTLDRHVGQRNVHVVAAPMNRILRFDLELNNLFPIDAEAEVTA EEECCCCCCCCHHCCCCHHHHHHCCCCCEEEEEECCCEEEEEEEEECCEECCCCCCHHHH RVEHVALTAAGRRAKAPEVLAQVLAFGGSITNTKLEIAQRYRRGTREYRSSTKVARNAPG EEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLAPATLVQAAGRNLAAVALTARLEERSSVVVGNGGALFTGMLAAREVLAAQGCAAPGLT CCCHHHHHHHCCCCEEEEEEEHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC LERFPMRAFERRKLALELAAPAGAAAGEFLVVHLNQTVHGILMGGYSIVVRVEGRG HHHCCHHHHHHHHEEEEEECCCCCCCCCEEEEEECCCEEEEEECCEEEEEEEECCC >Mature Secondary Structure PKTKTPDPRNRPAPVRHDRKPKGPTWEEWQEQVERERQAALEKYRQNWDRARNDSAARH CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC HWSPWLLIRYTPADLGARPIPSGDPFWISPDIWVESSDPMGNPVAGEDNFIHVRIFNLGS CCCCEEEEEECCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCEEEEEEEECCC ADAAPVKVDFYWANPALGLGPANMNLIGTEWVQVYSLTSKDVRCRTPWVPSLNIGAHQCL CCCCEEEEEEEECCCCCCCCCCCCCEEECCEEEEEEECCCCCEECCCCCCCCCCCCCEEE MVNCSNHVFDPIITPFAPTLDRHVGQRNVHVVAAPMNRILRFDLELNNLFPIDAEAEVTA EEECCCCCCCCHHCCCCHHHHHHCCCCCEEEEEECCCEEEEEEEEECCEECCCCCCHHHH RVEHVALTAAGRRAKAPEVLAQVLAFGGSITNTKLEIAQRYRRGTREYRSSTKVARNAPG EEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLAPATLVQAAGRNLAAVALTARLEERSSVVVGNGGALFTGMLAAREVLAAQGCAAPGLT CCCHHHHHHHCCCCEEEEEEEHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC LERFPMRAFERRKLALELAAPAGAAAGEFLVVHLNQTVHGILMGGYSIVVRVEGRG HHHCCHHHHHHHHEEEEEECCCCCCCCCEEEEEECCCEEEEEECCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA