Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116623233

Identifier: 116623233

GI number: 116623233

Start: 5251565

End: 5252815

Strand: Reverse

Name: 116623233

Synonym: Acid_4140

Alternate gene names: NA

Gene position: 5252815-5251565 (Counterclockwise)

Preceding gene: 116623234

Following gene: 116623232

Centisome position: 52.71

GC content: 66.27

Gene sequence:

>1251_bases
ATGCCGAAAACCAAAACCCCGGACCCTCGCAACCGGCCGGCGCCGGTCCGCCATGACCGTAAGCCAAAGGGTCCGACCTG
GGAAGAGTGGCAGGAGCAGGTGGAGCGCGAGCGGCAGGCAGCGCTCGAGAAATACCGCCAGAACTGGGACCGCGCCCGGA
ACGACTCCGCGGCGCGCCACCACTGGTCGCCGTGGCTGCTCATCCGCTACACACCGGCGGACCTGGGCGCGCGCCCAATC
CCCTCCGGCGACCCGTTCTGGATCTCTCCCGATATTTGGGTGGAGTCGAGCGACCCGATGGGGAATCCCGTGGCCGGCGA
GGACAATTTCATCCACGTCCGGATCTTCAACCTCGGGTCGGCGGATGCGGCGCCCGTGAAGGTGGATTTCTATTGGGCCA
ATCCCGCGCTGGGCCTGGGACCGGCGAACATGAACCTGATCGGCACCGAGTGGGTGCAGGTGTATTCGCTCACGTCGAAG
GACGTGCGCTGCCGGACGCCGTGGGTGCCATCGTTGAACATCGGGGCGCACCAGTGCCTGATGGTGAATTGCAGCAATCA
CGTTTTCGACCCCATCATCACTCCATTCGCGCCGACGCTGGACCGCCACGTCGGGCAGCGCAACGTTCACGTTGTGGCGG
CCCCCATGAACCGCATTCTCCGTTTCGACCTGGAACTGAACAACCTGTTTCCCATCGACGCCGAGGCGGAGGTCACCGCG
CGCGTGGAGCATGTGGCGCTGACCGCGGCGGGGCGGCGCGCGAAGGCCCCGGAGGTGCTCGCGCAAGTGTTGGCCTTCGG
CGGTTCGATCACCAACACCAAGCTCGAGATCGCGCAGCGCTACCGCCGCGGCACACGCGAATACCGGAGTTCCACGAAAG
TAGCGCGTAACGCTCCGGGACAACTGGCGCCGGCGACGCTGGTGCAGGCAGCGGGCCGAAACCTCGCGGCAGTCGCTTTG
ACCGCGCGCCTCGAGGAACGCTCCAGTGTGGTGGTGGGAAATGGAGGCGCACTGTTTACGGGGATGCTGGCGGCGCGGGA
AGTGCTCGCGGCGCAAGGCTGCGCGGCGCCGGGGCTGACGCTCGAACGCTTCCCTATGAGAGCCTTCGAACGCCGCAAAT
TGGCGCTCGAGTTAGCGGCGCCGGCCGGAGCCGCAGCCGGGGAATTCTTAGTGGTCCACCTGAACCAGACCGTGCACGGA
ATTCTGATGGGCGGCTATTCGATTGTGGTGCGAGTGGAGGGCCGGGGCTGA

Upstream 100 bases:

>100_bases
CGCCGACCGGGGAATGGCGTGGCTGACGTGGCAGTTCACTGCCGTTTACAGCGATCCGGTGGTGATCGAGCCGGAGCCGT
AGCGGCGCGGAGGAGCAGCG

Downstream 100 bases:

>100_bases
CCGGCTCCGAAAACAACAAGGAGGCAGGCTGAAAAATGCCGGAGAAAGAACGCAAATCGCCCCAGGAAACGCAGAAGCAT
GATGCGGCGCTTCTGCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MPKTKTPDPRNRPAPVRHDRKPKGPTWEEWQEQVERERQAALEKYRQNWDRARNDSAARHHWSPWLLIRYTPADLGARPI
PSGDPFWISPDIWVESSDPMGNPVAGEDNFIHVRIFNLGSADAAPVKVDFYWANPALGLGPANMNLIGTEWVQVYSLTSK
DVRCRTPWVPSLNIGAHQCLMVNCSNHVFDPIITPFAPTLDRHVGQRNVHVVAAPMNRILRFDLELNNLFPIDAEAEVTA
RVEHVALTAAGRRAKAPEVLAQVLAFGGSITNTKLEIAQRYRRGTREYRSSTKVARNAPGQLAPATLVQAAGRNLAAVAL
TARLEERSSVVVGNGGALFTGMLAAREVLAAQGCAAPGLTLERFPMRAFERRKLALELAAPAGAAAGEFLVVHLNQTVHG
ILMGGYSIVVRVEGRG

Sequences:

>Translated_416_residues
MPKTKTPDPRNRPAPVRHDRKPKGPTWEEWQEQVERERQAALEKYRQNWDRARNDSAARHHWSPWLLIRYTPADLGARPI
PSGDPFWISPDIWVESSDPMGNPVAGEDNFIHVRIFNLGSADAAPVKVDFYWANPALGLGPANMNLIGTEWVQVYSLTSK
DVRCRTPWVPSLNIGAHQCLMVNCSNHVFDPIITPFAPTLDRHVGQRNVHVVAAPMNRILRFDLELNNLFPIDAEAEVTA
RVEHVALTAAGRRAKAPEVLAQVLAFGGSITNTKLEIAQRYRRGTREYRSSTKVARNAPGQLAPATLVQAAGRNLAAVAL
TARLEERSSVVVGNGGALFTGMLAAREVLAAQGCAAPGLTLERFPMRAFERRKLALELAAPAGAAAGEFLVVHLNQTVHG
ILMGGYSIVVRVEGRG
>Mature_415_residues
PKTKTPDPRNRPAPVRHDRKPKGPTWEEWQEQVERERQAALEKYRQNWDRARNDSAARHHWSPWLLIRYTPADLGARPIP
SGDPFWISPDIWVESSDPMGNPVAGEDNFIHVRIFNLGSADAAPVKVDFYWANPALGLGPANMNLIGTEWVQVYSLTSKD
VRCRTPWVPSLNIGAHQCLMVNCSNHVFDPIITPFAPTLDRHVGQRNVHVVAAPMNRILRFDLELNNLFPIDAEAEVTAR
VEHVALTAAGRRAKAPEVLAQVLAFGGSITNTKLEIAQRYRRGTREYRSSTKVARNAPGQLAPATLVQAAGRNLAAVALT
ARLEERSSVVVGNGGALFTGMLAAREVLAAQGCAAPGLTLERFPMRAFERRKLALELAAPAGAAAGEFLVVHLNQTVHGI
LMGGYSIVVRVEGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45742; Mature: 45611

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTKTPDPRNRPAPVRHDRKPKGPTWEEWQEQVERERQAALEKYRQNWDRARNDSAARH
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC
HWSPWLLIRYTPADLGARPIPSGDPFWISPDIWVESSDPMGNPVAGEDNFIHVRIFNLGS
CCCCEEEEEECCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCEEEEEEEECCC
ADAAPVKVDFYWANPALGLGPANMNLIGTEWVQVYSLTSKDVRCRTPWVPSLNIGAHQCL
CCCCEEEEEEEECCCCCCCCCCCCCEEECCEEEEEEECCCCCEECCCCCCCCCCCCCEEE
MVNCSNHVFDPIITPFAPTLDRHVGQRNVHVVAAPMNRILRFDLELNNLFPIDAEAEVTA
EEECCCCCCCCHHCCCCHHHHHHCCCCCEEEEEECCCEEEEEEEEECCEECCCCCCHHHH
RVEHVALTAAGRRAKAPEVLAQVLAFGGSITNTKLEIAQRYRRGTREYRSSTKVARNAPG
EEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QLAPATLVQAAGRNLAAVALTARLEERSSVVVGNGGALFTGMLAAREVLAAQGCAAPGLT
CCCHHHHHHHCCCCEEEEEEEHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
LERFPMRAFERRKLALELAAPAGAAAGEFLVVHLNQTVHGILMGGYSIVVRVEGRG
HHHCCHHHHHHHHEEEEEECCCCCCCCCEEEEEECCCEEEEEECCEEEEEEEECCC
>Mature Secondary Structure 
PKTKTPDPRNRPAPVRHDRKPKGPTWEEWQEQVERERQAALEKYRQNWDRARNDSAARH
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC
HWSPWLLIRYTPADLGARPIPSGDPFWISPDIWVESSDPMGNPVAGEDNFIHVRIFNLGS
CCCCEEEEEECCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCEEEEEEEECCC
ADAAPVKVDFYWANPALGLGPANMNLIGTEWVQVYSLTSKDVRCRTPWVPSLNIGAHQCL
CCCCEEEEEEEECCCCCCCCCCCCCEEECCEEEEEEECCCCCEECCCCCCCCCCCCCEEE
MVNCSNHVFDPIITPFAPTLDRHVGQRNVHVVAAPMNRILRFDLELNNLFPIDAEAEVTA
EEECCCCCCCCHHCCCCHHHHHHCCCCCEEEEEECCCEEEEEEEEECCEECCCCCCHHHH
RVEHVALTAAGRRAKAPEVLAQVLAFGGSITNTKLEIAQRYRRGTREYRSSTKVARNAPG
EEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QLAPATLVQAAGRNLAAVALTARLEERSSVVVGNGGALFTGMLAAREVLAAQGCAAPGLT
CCCHHHHHHHCCCCEEEEEEEHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
LERFPMRAFERRKLALELAAPAGAAAGEFLVVHLNQTVHGILMGGYSIVVRVEGRG
HHHCCHHHHHHHHEEEEEECCCCCCCCCEEEEEECCCEEEEEECCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA