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The map label for this gene is 116623222

Identifier: 116623222

GI number: 116623222

Start: 5243746

End: 5244042

Strand: Reverse

Name: 116623222

Synonym: Acid_4129

Alternate gene names: NA

Gene position: 5244042-5243746 (Counterclockwise)

Preceding gene: 116623223

Following gene: 116623220

Centisome position: 52.62

GC content: 60.61

Gene sequence:

>297_bases
ATGAACAGACGACTCGCCGTGCTCCTGCCGTTGCTGCTGCTGCTCGCCGCCTGCGCGGAGAAGGCCGTACCCGCCAAGCG
CTACCCGATGCAGGGAGAGGTCAAAGCGTTAGACGCCACCGCGAAAACCGCCACCATCGCCGCCGGAAAGGTCGGCGACT
GGATGGAGGCGATGACGATGGAGTACCCGGTCAAGCCCGATTCTGAATTCCAGAAGCTGCACGTGGGCGATAAGATCGAG
GCGACCGTGGTGGTGGCCGACGTGAAATATTACGTGACCGATATCAAGGTGAAATAG

Upstream 100 bases:

>100_bases
CGAAGATGGCGATTGTCCCGCGGAGCGACGTCCGCTTCACGATCGTCCAGGTGATTCCGCCGGCTCCCGCCTGCGACGAG
GGAAACGTATCATTAAAGAG

Downstream 100 bases:

>100_bases
GCCGGCTATTGGTGGGCCGCGGGCGCTTTCAGCAGCTTGTCCAATTCGGCGCGGATGTTGGGGCCGGCGTTGCGGAAGAA
ATCGCTCTCACCGGGATAGT

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MNRRLAVLLPLLLLLAACAEKAVPAKRYPMQGEVKALDATAKTATIAAGKVGDWMEAMTMEYPVKPDSEFQKLHVGDKIE
ATVVVADVKYYVTDIKVK

Sequences:

>Translated_98_residues
MNRRLAVLLPLLLLLAACAEKAVPAKRYPMQGEVKALDATAKTATIAAGKVGDWMEAMTMEYPVKPDSEFQKLHVGDKIE
ATVVVADVKYYVTDIKVK
>Mature_98_residues
MNRRLAVLLPLLLLLAACAEKAVPAKRYPMQGEVKALDATAKTATIAAGKVGDWMEAMTMEYPVKPDSEFQKLHVGDKIE
ATVVVADVKYYVTDIKVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10749; Mature: 10749

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRLAVLLPLLLLLAACAEKAVPAKRYPMQGEVKALDATAKTATIAAGKVGDWMEAMTM
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHC
EYPVKPDSEFQKLHVGDKIEATVVVADVKYYVTDIKVK
CCCCCCCCCHHEEECCCCCEEEEEEEEEEEEEEEEEEC
>Mature Secondary Structure
MNRRLAVLLPLLLLLAACAEKAVPAKRYPMQGEVKALDATAKTATIAAGKVGDWMEAMTM
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHC
EYPVKPDSEFQKLHVGDKIEATVVVADVKYYVTDIKVK
CCCCCCCCCHHEEECCCCCEEEEEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA