| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623215
Identifier: 116623215
GI number: 116623215
Start: 5233189
End: 5235888
Strand: Direct
Name: 116623215
Synonym: Acid_4122
Alternate gene names: NA
Gene position: 5233189-5235888 (Clockwise)
Preceding gene: 116623214
Following gene: 116623217
Centisome position: 52.51
GC content: 60.52
Gene sequence:
>2700_bases ATGCCAGAACAACTTACTAAACTTCGTCCGGACCGCGACCTGCAGTGCTACTTCGAGCGTCCGTCGGCGGTAGCCGCGCT CAGCGGCGCGTCAGCAGGCGGATTCACCGTGTCGGGGTGTTGGCGACAGCAGTTCGATTGGGCCGTGGTGGAGTGGACAC GAGACAACACCTTCGAATATCCGCCCTTGCGCAATTTACCCGACGGCGATCTCAGTGGTGTGCATCTCACTTACGAAGAG GTCCGCACAAACTGTATCACCCTGGACTCCGCGCTCTACCCGACGGTGGATTGGCCCTATTTGCGCATTTGGGCCATCTC GGGCGGTATCGAGACGCTATATAGAGTTCCCCTGAAGGATCACGCTGCCGCGATAGGCGACTATCATGCCGCAAAGGCGG TGTTCGAATTGCAGGGAACGCCAGGGCCTGGAGATTACATCGAGCTGGCATGGCTGGAGCAGCACTTCAATTATCGAGTT ACCGCCAGTGACACGCTGGAGAGCGCTGTAGCCGCGCTCGCCGGAGTCATCGCAGCAAATCAGGACTCCGCCGGCGTGAG CGCATGCGCCAGCGGCACACAGATTACGTTGACTTACCTTGGCATGGCGGGAACCAATGGCAATCGAGTCGGCGTGTACG GCACGACTTATGGGACGGGCACGCAATCGTGGTCACCTACGGCGAGCCTGTTTAGCGGCGGATTATCTCCGCAGCGCTGG AAGATCGATCTGGATTTCAGCAATCTGCTCGACGTCAACGGCACGCACGTGCCCACCGCTAATGTGCGCAAGATGCGCTG GACCTGGGCGGCCGACCTGCAGAGCGCCGATTTCGCGCGCAGTGAGTTTTCCGTGATGGTTTCAAGTTGGTCCGTCACGG GCGCCAATCTGCTCTATTCGGTCGCGGGGGCGGGCAGCCGGCGCATCGAAGATGACTCCGAAGACGTGTCTCTCGAGGGT GCCTGGAGCTTTGAGCACGGAAACTATTCGGGCGGTTCGATTCGTTGGACGACAACCCCCGGCGCTCGCATTCGCTGTAC TTATCAGGCGAATGGGGCGCACACGCTGCTGCTGGGTACCCGCAGAACGGCGACCGCCGGCAAGATCTGCGTTCAGGTGG ATACCGGCGCACCGGTCACCGTGGACCTGAGCCTCGCGGCCGAAGATGTACTGGTGCGGTTGCCTCTCGGCTCACTATCT GGACAAGCAGCTCACACCGTGACCATCACGCACGCCGGCGCGGCCGGCACCTCGGTGTACTTCGACTTTTTGGAAATCGC CTATCCATGCAGCCAGTTGCCGGAATTCAGCGCGATGAACCAGACTACGCTGGCGACCGATTGGGACACGGACCATTCCA TCGCACTCGCCGCGGAAAGGACGGCGTGGATTCTCCAGAAGCTGGGATTCCGCGGCCGCGCCAACCATTATGTAGGCGCA ATGTGGTTCTACGAGCTGTACCGTCCGGGTCAAGCCTACGCGTCGGGATCGATCACGTTTTCGGGAGTGCCTCAGTTCGG GAAGATCACGCAGTTGACAGTGGGTGCGACGCCGGTCCAACACCTGAACCTGATCGGCGATACGCCGGAGAGCATCGCGA AGTGTTTTGAACTCTTGATCAACGCGGGATCCACCGGTGTCCGTGCATGCTCGCAAGGCGCGGTCCTCACGATCGCTTCC CGGGCCATGGGCACGGCCGGCAATGCAATCTCGATTTCCGCGCGGACAAATAGCGCGGGATTTACGGCGCAGACCAGCGC TGCCACGCTAACCGGCGGGCTTGATGGAATCTGGCGCACCGACACCGCCGCCACGCGGCGGATCAACCGCGCAGCGCGAG ATTGGACGCGCGCCTATCTTCAGGCACTGACGGCCTCCAGTATCGATGCTACGGCGGCATTTAGCATGGAATTGCAACAT GGCGACGATACGCCCGCTGCCGGCCTCGCCCAGCGATATCCGAATGGCGACGCGGTCTGGCTCAATACTCCAGCGCTGCA GACCAATTTCGGACCGGAGAGCACGGCCTTCTGGCGCGAGGTCCACCTGGAGATGGCAGGTGTGATGTCCGAGGCCGGAC TCCGTCCCTACCTGCAGTTCGGCGAAGTTCAATGGTGGTATTTCGCGGGGCCTTCCGGCATGACGTTCTACGACAGCCAC ACCACATCGGCATTCCAAGCCCGTTACGGCCGTCCCATGGGTTTGATCGCAAACCAGAAGGTGGACCCGGCGGCCTTCCC TGACGAATGCACGTTCCTATCTCAACTAATTGGGCAGTTTACCGATGCAATCATGGCCTACGTGCGGCAGACCTATCCCG ATGCCCGATTCGAGGTGTTGTATCCGCCCGATGTGAACGATACGCCGCTCAATAGCAAAATCAACTTTCCCGCGACCTAC TGGACGCCGGCGCGCATTGATTGCCTGAAGACAGAGAATTTCACCTACACCGGCGATCGCGACCTCAACAAGGCGCAGCA ATCGATTGACCTGCCGCTGCAACTCGGTTTCTCACGGTCGGAGGCCAGCCACCTGGTGGGCATCGGCGAGTATACGGCGC CCTGGAACAAGGAGCAGCAACTCGCCACCGGCGGTCACCTTGAATCCGTAGTGTTGTTTGCGCTCGATCAATTCTGCCTG ATTGGATATGCCCTGCCGTTGGATCGCGGGTCGCGCCGGTCGCAGTACATGGGAAGTTAA
Upstream 100 bases:
>100_bases TGCTCCCGCCGCTCTCGACCGGGTCCAGGATCACGCTCTCTATTCTTGCCGTAGGACAGACCATTCCAGGCTCCGATCTC ACGGTGCTGATTCGACTCTA
Downstream 100 bases:
>100_bases GCTCAATCGAACGCGAGGTCCTTTTCCAGCGCAAGGTAGCCGCAAGCCACAATCACCAGGAACATGGTGAGCACTTCGCT ATCCCCGAGGTTCAGTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 899; Mature: 898
Protein sequence:
>899_residues MPEQLTKLRPDRDLQCYFERPSAVAALSGASAGGFTVSGCWRQQFDWAVVEWTRDNTFEYPPLRNLPDGDLSGVHLTYEE VRTNCITLDSALYPTVDWPYLRIWAISGGIETLYRVPLKDHAAAIGDYHAAKAVFELQGTPGPGDYIELAWLEQHFNYRV TASDTLESAVAALAGVIAANQDSAGVSACASGTQITLTYLGMAGTNGNRVGVYGTTYGTGTQSWSPTASLFSGGLSPQRW KIDLDFSNLLDVNGTHVPTANVRKMRWTWAADLQSADFARSEFSVMVSSWSVTGANLLYSVAGAGSRRIEDDSEDVSLEG AWSFEHGNYSGGSIRWTTTPGARIRCTYQANGAHTLLLGTRRTATAGKICVQVDTGAPVTVDLSLAAEDVLVRLPLGSLS GQAAHTVTITHAGAAGTSVYFDFLEIAYPCSQLPEFSAMNQTTLATDWDTDHSIALAAERTAWILQKLGFRGRANHYVGA MWFYELYRPGQAYASGSITFSGVPQFGKITQLTVGATPVQHLNLIGDTPESIAKCFELLINAGSTGVRACSQGAVLTIAS RAMGTAGNAISISARTNSAGFTAQTSAATLTGGLDGIWRTDTAATRRINRAARDWTRAYLQALTASSIDATAAFSMELQH GDDTPAAGLAQRYPNGDAVWLNTPALQTNFGPESTAFWREVHLEMAGVMSEAGLRPYLQFGEVQWWYFAGPSGMTFYDSH TTSAFQARYGRPMGLIANQKVDPAAFPDECTFLSQLIGQFTDAIMAYVRQTYPDARFEVLYPPDVNDTPLNSKINFPATY WTPARIDCLKTENFTYTGDRDLNKAQQSIDLPLQLGFSRSEASHLVGIGEYTAPWNKEQQLATGGHLESVVLFALDQFCL IGYALPLDRGSRRSQYMGS
Sequences:
>Translated_899_residues MPEQLTKLRPDRDLQCYFERPSAVAALSGASAGGFTVSGCWRQQFDWAVVEWTRDNTFEYPPLRNLPDGDLSGVHLTYEE VRTNCITLDSALYPTVDWPYLRIWAISGGIETLYRVPLKDHAAAIGDYHAAKAVFELQGTPGPGDYIELAWLEQHFNYRV TASDTLESAVAALAGVIAANQDSAGVSACASGTQITLTYLGMAGTNGNRVGVYGTTYGTGTQSWSPTASLFSGGLSPQRW KIDLDFSNLLDVNGTHVPTANVRKMRWTWAADLQSADFARSEFSVMVSSWSVTGANLLYSVAGAGSRRIEDDSEDVSLEG AWSFEHGNYSGGSIRWTTTPGARIRCTYQANGAHTLLLGTRRTATAGKICVQVDTGAPVTVDLSLAAEDVLVRLPLGSLS GQAAHTVTITHAGAAGTSVYFDFLEIAYPCSQLPEFSAMNQTTLATDWDTDHSIALAAERTAWILQKLGFRGRANHYVGA MWFYELYRPGQAYASGSITFSGVPQFGKITQLTVGATPVQHLNLIGDTPESIAKCFELLINAGSTGVRACSQGAVLTIAS RAMGTAGNAISISARTNSAGFTAQTSAATLTGGLDGIWRTDTAATRRINRAARDWTRAYLQALTASSIDATAAFSMELQH GDDTPAAGLAQRYPNGDAVWLNTPALQTNFGPESTAFWREVHLEMAGVMSEAGLRPYLQFGEVQWWYFAGPSGMTFYDSH TTSAFQARYGRPMGLIANQKVDPAAFPDECTFLSQLIGQFTDAIMAYVRQTYPDARFEVLYPPDVNDTPLNSKINFPATY WTPARIDCLKTENFTYTGDRDLNKAQQSIDLPLQLGFSRSEASHLVGIGEYTAPWNKEQQLATGGHLESVVLFALDQFCL IGYALPLDRGSRRSQYMGS >Mature_898_residues PEQLTKLRPDRDLQCYFERPSAVAALSGASAGGFTVSGCWRQQFDWAVVEWTRDNTFEYPPLRNLPDGDLSGVHLTYEEV RTNCITLDSALYPTVDWPYLRIWAISGGIETLYRVPLKDHAAAIGDYHAAKAVFELQGTPGPGDYIELAWLEQHFNYRVT ASDTLESAVAALAGVIAANQDSAGVSACASGTQITLTYLGMAGTNGNRVGVYGTTYGTGTQSWSPTASLFSGGLSPQRWK IDLDFSNLLDVNGTHVPTANVRKMRWTWAADLQSADFARSEFSVMVSSWSVTGANLLYSVAGAGSRRIEDDSEDVSLEGA WSFEHGNYSGGSIRWTTTPGARIRCTYQANGAHTLLLGTRRTATAGKICVQVDTGAPVTVDLSLAAEDVLVRLPLGSLSG QAAHTVTITHAGAAGTSVYFDFLEIAYPCSQLPEFSAMNQTTLATDWDTDHSIALAAERTAWILQKLGFRGRANHYVGAM WFYELYRPGQAYASGSITFSGVPQFGKITQLTVGATPVQHLNLIGDTPESIAKCFELLINAGSTGVRACSQGAVLTIASR AMGTAGNAISISARTNSAGFTAQTSAATLTGGLDGIWRTDTAATRRINRAARDWTRAYLQALTASSIDATAAFSMELQHG DDTPAAGLAQRYPNGDAVWLNTPALQTNFGPESTAFWREVHLEMAGVMSEAGLRPYLQFGEVQWWYFAGPSGMTFYDSHT TSAFQARYGRPMGLIANQKVDPAAFPDECTFLSQLIGQFTDAIMAYVRQTYPDARFEVLYPPDVNDTPLNSKINFPATYW TPARIDCLKTENFTYTGDRDLNKAQQSIDLPLQLGFSRSEASHLVGIGEYTAPWNKEQQLATGGHLESVVLFALDQFCLI GYALPLDRGSRRSQYMGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97517; Mature: 97386
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEQLTKLRPDRDLQCYFERPSAVAALSGASAGGFTVSGCWRQQFDWAVVEWTRDNTFEY CCCHHHHCCCCCCCEEEEECCCEEEEECCCCCCCEEEECHHHHCCCEEEEEEECCCCCCC PPLRNLPDGDLSGVHLTYEEVRTNCITLDSALYPTVDWPYLRIWAISGGIETLYRVPLKD CCCCCCCCCCCCCEEEEHHHHCCEEEEECCCCCCCCCCCEEEEEEECCCHHEEEECCCHH HAAAIGDYHAAKAVFELQGTPGPGDYIELAWLEQHFNYRVTASDTLESAVAALAGVIAAN HHHHHCCHHHEEEEEEECCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCC QDSAGVSACASGTQITLTYLGMAGTNGNRVGVYGTTYGTGTQSWSPTASLFSGGLSPQRW CCCCCHHHHCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCEE KIDLDFSNLLDVNGTHVPTANVRKMRWTWAADLQSADFARSEFSVMVSSWSVTGANLLYS EEEECHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHEE VAGAGSRRIEDDSEDVSLEGAWSFEHGNYSGGSIRWTTTPGARIRCTYQANGAHTLLLGT ECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEC RRTATAGKICVQVDTGAPVTVDLSLAAEDVLVRLPLGSLSGQAAHTVTITHAGAAGTSVY CCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHH FDFLEIAYPCSQLPEFSAMNQTTLATDWDTDHSIALAAERTAWILQKLGFRGRANHYVGA HHHHHHHCCHHHCCCCCCCCCCEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHH MWFYELYRPGQAYASGSITFSGVPQFGKITQLTVGATPVQHLNLIGDTPESIAKCFELLI HHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCCHHHHEECCCCHHHHHHHHHHHH NAGSTGVRACSQGAVLTIASRAMGTAGNAISISARTNSAGFTAQTSAATLTGGLDGIWRT CCCCHHHHHHCCCCEEEEEHHHCCCCCCEEEEEEECCCCCCEEECCCEEEECCCCCCCCC DTAATRRINRAARDWTRAYLQALTASSIDATAAFSMELQHGDDTPAAGLAQRYPNGDAVW CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCEEE LNTPALQTNFGPESTAFWREVHLEMAGVMSEAGLRPYLQFGEVQWWYFAGPSGMTFYDSH EECCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEECCCCCEEEECC TTSAFQARYGRPMGLIANQKVDPAAFPDECTFLSQLIGQFTDAIMAYVRQTYPDARFEVL CCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE YPPDVNDTPLNSKINFPATYWTPARIDCLKTENFTYTGDRDLNKAQQSIDLPLQLGFSRS ECCCCCCCCCCCEECCCEEECCCCEEEEEECCCEEECCCCCHHHHHHHCCCCEEECCCCC EASHLVGIGEYTAPWNKEQQLATGGHLESVVLFALDQFCLIGYALPLDRGSRRSQYMGS CCCCEEECCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHCCCC >Mature Secondary Structure PEQLTKLRPDRDLQCYFERPSAVAALSGASAGGFTVSGCWRQQFDWAVVEWTRDNTFEY CCHHHHCCCCCCCEEEEECCCEEEEECCCCCCCEEEECHHHHCCCEEEEEEECCCCCCC PPLRNLPDGDLSGVHLTYEEVRTNCITLDSALYPTVDWPYLRIWAISGGIETLYRVPLKD CCCCCCCCCCCCCEEEEHHHHCCEEEEECCCCCCCCCCCEEEEEEECCCHHEEEECCCHH HAAAIGDYHAAKAVFELQGTPGPGDYIELAWLEQHFNYRVTASDTLESAVAALAGVIAAN HHHHHCCHHHEEEEEEECCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCC QDSAGVSACASGTQITLTYLGMAGTNGNRVGVYGTTYGTGTQSWSPTASLFSGGLSPQRW CCCCCHHHHCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHCCCCCCEE KIDLDFSNLLDVNGTHVPTANVRKMRWTWAADLQSADFARSEFSVMVSSWSVTGANLLYS EEEECHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHEE VAGAGSRRIEDDSEDVSLEGAWSFEHGNYSGGSIRWTTTPGARIRCTYQANGAHTLLLGT ECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEC RRTATAGKICVQVDTGAPVTVDLSLAAEDVLVRLPLGSLSGQAAHTVTITHAGAAGTSVY CCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHH FDFLEIAYPCSQLPEFSAMNQTTLATDWDTDHSIALAAERTAWILQKLGFRGRANHYVGA HHHHHHHCCHHHCCCCCCCCCCEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHH MWFYELYRPGQAYASGSITFSGVPQFGKITQLTVGATPVQHLNLIGDTPESIAKCFELLI HHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCCHHHHEECCCCHHHHHHHHHHHH NAGSTGVRACSQGAVLTIASRAMGTAGNAISISARTNSAGFTAQTSAATLTGGLDGIWRT CCCCHHHHHHCCCCEEEEEHHHCCCCCCEEEEEEECCCCCCEEECCCEEEECCCCCCCCC DTAATRRINRAARDWTRAYLQALTASSIDATAAFSMELQHGDDTPAAGLAQRYPNGDAVW CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCEEE LNTPALQTNFGPESTAFWREVHLEMAGVMSEAGLRPYLQFGEVQWWYFAGPSGMTFYDSH EECCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEECCCCCEEEECC TTSAFQARYGRPMGLIANQKVDPAAFPDECTFLSQLIGQFTDAIMAYVRQTYPDARFEVL CCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE YPPDVNDTPLNSKINFPATYWTPARIDCLKTENFTYTGDRDLNKAQQSIDLPLQLGFSRS ECCCCCCCCCCCEECCCEEECCCCEEEEEECCCEEECCCCCHHHHHHHCCCCEEECCCCC EASHLVGIGEYTAPWNKEQQLATGGHLESVVLFALDQFCLIGYALPLDRGSRRSQYMGS CCCCEEECCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA