| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623207
Identifier: 116623207
GI number: 116623207
Start: 5225162
End: 5225662
Strand: Direct
Name: 116623207
Synonym: Acid_4114
Alternate gene names: NA
Gene position: 5225162-5225662 (Clockwise)
Preceding gene: 116623206
Following gene: 116623208
Centisome position: 52.43
GC content: 61.48
Gene sequence:
>501_bases ATGACAACCAAAATCGGAAGCGCGGTAACTGGAAAGGTGCTGCAGCGGATTACCGGGCCGGCCGGAGTGAACGCCGGGCT GGGCGGATTGACGCAGGCGGAGCGCGAGTTCGCCGGGTTGGTGGACGCGGCGCAGGTCCGGGCGCAAAACGTGGCGGCGG ACCTGGCGGAGAAGGCGACGGGCGTGAAGTATCCGGCAGTGAACGTGTACTGCGAAAAGATCGTGAACGACCTGCGCGAG AAATTTCGCCGGTTCTCGGGCAGCGCGCAAATGGCGATCGAACTTCGGCAATCGCAGGACAGGTTGGACGGGATTCAGGA CAGGCTCGAGCTCTATGTGGATGCGACGATGCAGATGCTGAACGGCAGCCGCGGAGATTGGGGCGATGGGATGTTTTACG GCGGACAGTACCAGGTGGCGTACGGGCCGGTGAAGCAGGGCGGCAAGAATTTTACACAGGTCGCGAAAGTGACCTTCGAG ATCGGAGTTAGCAAGGACTAG
Upstream 100 bases:
>100_bases GGCTGCAATCGAACTCGATATTAACAGCCGGCACTCCGGCGGGTTGCGGGCAGGCTCCCGACTTCCTGCTGCCCGTGCCG CGGATTTTGCAGAGGGGCTG
Downstream 100 bases:
>100_bases TATGGCTTCCTATATTTCCTCCAACGCAAACCGTTTTTACGCGGCGTTGGAGAGCGCGTACGGAAAGGTGGACCCGATCA CGGCCGCCAACCGGATCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTTKIGSAVTGKVLQRITGPAGVNAGLGGLTQAEREFAGLVDAAQVRAQNVAADLAEKATGVKYPAVNVYCEKIVNDLRE KFRRFSGSAQMAIELRQSQDRLDGIQDRLELYVDATMQMLNGSRGDWGDGMFYGGQYQVAYGPVKQGGKNFTQVAKVTFE IGVSKD
Sequences:
>Translated_166_residues MTTKIGSAVTGKVLQRITGPAGVNAGLGGLTQAEREFAGLVDAAQVRAQNVAADLAEKATGVKYPAVNVYCEKIVNDLRE KFRRFSGSAQMAIELRQSQDRLDGIQDRLELYVDATMQMLNGSRGDWGDGMFYGGQYQVAYGPVKQGGKNFTQVAKVTFE IGVSKD >Mature_165_residues TTKIGSAVTGKVLQRITGPAGVNAGLGGLTQAEREFAGLVDAAQVRAQNVAADLAEKATGVKYPAVNVYCEKIVNDLREK FRRFSGSAQMAIELRQSQDRLDGIQDRLELYVDATMQMLNGSRGDWGDGMFYGGQYQVAYGPVKQGGKNFTQVAKVTFEI GVSKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17915; Mature: 17783
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKIGSAVTGKVLQRITGPAGVNAGLGGLTQAEREFAGLVDAAQVRAQNVAADLAEKAT CCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVKYPAVNVYCEKIVNDLREKFRRFSGSAQMAIELRQSQDRLDGIQDRLELYVDATMQML CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGSRGDWGDGMFYGGQYQVAYGPVKQGGKNFTQVAKVTFEIGVSKD CCCCCCCCCCCEECCEEEEEECCHHHCCCHHHHHHHHHHEECCCCC >Mature Secondary Structure TTKIGSAVTGKVLQRITGPAGVNAGLGGLTQAEREFAGLVDAAQVRAQNVAADLAEKAT CCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVKYPAVNVYCEKIVNDLREKFRRFSGSAQMAIELRQSQDRLDGIQDRLELYVDATMQML CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGSRGDWGDGMFYGGQYQVAYGPVKQGGKNFTQVAKVTFEIGVSKD CCCCCCCCCCCEECCEEEEEECCHHHCCCHHHHHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA