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The map label for this gene is arnT [H]

Identifier: 116623199

GI number: 116623199

Start: 5217374

End: 5219098

Strand: Direct

Name: arnT [H]

Synonym: Acid_4106

Alternate gene names: 116623199

Gene position: 5217374-5219098 (Clockwise)

Preceding gene: 116623198

Following gene: 116623200

Centisome position: 52.35

GC content: 59.59

Gene sequence:

>1725_bases
GTGGCGGCTGCGATTTTCCTGGGCTGTATTGTCAGCCCGCCATCGTTAATGGATGACGTGGACGCCGTACAGGCGCAGAT
TGGGCGGAACATGCTGCAATCGGGCGATTGGGTTACGGCGCGGCTGGACGGCGTCGCGTATCTTGAAAAATCTCCGTTGA
AATACTGGATGATCGCGGTGTCGTTCATGGTGTTCGGGGTGCACGATTGGGCGGCCCGCATACCGATCGCGCTCTCCACG
GTGCTGCTGTGCTGGGTGACGGCACGATTCGCGGCTTGGGCATTCGGCGCACGCGAGGGGCTGTATTCCGGCCTGGCGCT
GGGCACGAGTATCGGACTATTTCTGTTCACGCGCATTTTGATTCCGGACGTGATGCTGACGTTGACGATCACGCTGGCCC
TCTGGGGAATGGTGCGAACGCTCGAGGAGGAGGAACCGCATCCCACGCTGTGGGCGGCGGGGATCTGGGTATCGATCGCA
CTGGGACTGCTGTTGAAGGGACTGATCGCGGCGGCGTTTCCGATGGCGACAGGGTTGATCTACCTCGCGCTGACGAAGCA
GCTGCTGGCGAGGCGAACGTGGCAGAGGCTGCGGCCGTTTTCGGGGATCCTGTTGATGCTGGTGATCGCGGCGCCATGGC
ACGTGCTGGCGACGATCCGCAATCCGCCGTATTTCGATTTTACGATGCACAGCGAGAAGGGCTCGTATCACGGATTCTTC
TGGTTCTATTTCATGAACGAGCATGTGCTGCGGTTTCTGAACCTGCGATATCCGCGGGATTACAACACGGTGCCGCGTCC
TCTGTTCTGGCTATTCCACCTGCTGTGGTTCTTTCCGTGGAGCTTGTATTTTCCGGCGGCGGTAAAGCTGCGCTACGGCA
ATACAGACAGGACCTCGCGCGTGCGGTTGCTGTGCCTGTGCTGGATCGGATTCATTCTGACGTTCTTCACGTTCTCGACG
ACGCAGGAGTATTACTCGATGCCTTGCTATCCGGCGATGGCGATGCTGCTGGGCTGCGCGATGGCGAGCGGGAGCGGCTG
GCTCAAGTGGGGCACGCGCGTGATCGCAGTGGTGACGACGCTGGCGCTGGCGGCGATCGCCGCGATTCTGTGGATGGTGC
GGGGACTGCCTTCCCCGGGAGACATCGCGTCGGCGTTGAATTCCAACCCCGATGTGTACACACTTTCGCTGGGCCACATG
ACGGACCTGACGATCGCGTCGTTCGCGTATTTACGCGCGCCGCTGGTAGTGGCGGGAATTGCGTTCGCGATAGGGGCGTG
GGGCGCGTGGCGGCAGCGCATGGTTACGGCATCGCTGGTCGCGATGCTGGTGTTCTTCTTCCACGCGGCGCGAATGGCGC
TGGTGGTATTCGACCCGTACATGTCGTCGCGGCCGCTGGCGGAGGCGCTGCTCGATGCGCCGCCCGGCAAGTTGATTGTG
GACGACCAATACTACACGTTCTCGTCGGTTTTCTTTTACACGAATCGTCGCGCGTATTTGTTGAACGGGCGGGTCAACAA
TCTGGATTACGGGTCGTACGCACCGGACGCGCCGAAGGATGTTTTCATCAGCGATGACGACTTTCGACGTTACTGGACGA
GCAATGAAAAATTCTATCTTTTGGTGGAGGCTCCTAAGGCCAAGCGTTTACAGGACTTAGCGGGCGCCGAGAGATTTCAC
GTTCAAAAACGTAGCGGCGGCAAATTCCTGTTCACCAATTTTTGA

Upstream 100 bases:

>100_bases
TCCTGTGGATGAAAAGATGGAAGGTGGAGGCATTGCCTCCCGAGGAAGAGATGCGTCAGGTTCCGGCGCGAGTTCTCGCT
ACCAGATAATCGTACTGCTG

Downstream 100 bases:

>100_bases
AATTTATATTTGGTTCGTTTTCAGTAACTTAAGAAATTAGCCCACGGGGTAGGCGAGAACGTGGGTGTTACTTTCAAAAC
AGCGAGAAGGTTGCGGGGCT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 574; Mature: 573

Protein sequence:

>574_residues
MAAAIFLGCIVSPPSLMDDVDAVQAQIGRNMLQSGDWVTARLDGVAYLEKSPLKYWMIAVSFMVFGVHDWAARIPIALST
VLLCWVTARFAAWAFGAREGLYSGLALGTSIGLFLFTRILIPDVMLTLTITLALWGMVRTLEEEEPHPTLWAAGIWVSIA
LGLLLKGLIAAAFPMATGLIYLALTKQLLARRTWQRLRPFSGILLMLVIAAPWHVLATIRNPPYFDFTMHSEKGSYHGFF
WFYFMNEHVLRFLNLRYPRDYNTVPRPLFWLFHLLWFFPWSLYFPAAVKLRYGNTDRTSRVRLLCLCWIGFILTFFTFST
TQEYYSMPCYPAMAMLLGCAMASGSGWLKWGTRVIAVVTTLALAAIAAILWMVRGLPSPGDIASALNSNPDVYTLSLGHM
TDLTIASFAYLRAPLVVAGIAFAIGAWGAWRQRMVTASLVAMLVFFFHAARMALVVFDPYMSSRPLAEALLDAPPGKLIV
DDQYYTFSSVFFYTNRRAYLLNGRVNNLDYGSYAPDAPKDVFISDDDFRRYWTSNEKFYLLVEAPKAKRLQDLAGAERFH
VQKRSGGKFLFTNF

Sequences:

>Translated_574_residues
MAAAIFLGCIVSPPSLMDDVDAVQAQIGRNMLQSGDWVTARLDGVAYLEKSPLKYWMIAVSFMVFGVHDWAARIPIALST
VLLCWVTARFAAWAFGAREGLYSGLALGTSIGLFLFTRILIPDVMLTLTITLALWGMVRTLEEEEPHPTLWAAGIWVSIA
LGLLLKGLIAAAFPMATGLIYLALTKQLLARRTWQRLRPFSGILLMLVIAAPWHVLATIRNPPYFDFTMHSEKGSYHGFF
WFYFMNEHVLRFLNLRYPRDYNTVPRPLFWLFHLLWFFPWSLYFPAAVKLRYGNTDRTSRVRLLCLCWIGFILTFFTFST
TQEYYSMPCYPAMAMLLGCAMASGSGWLKWGTRVIAVVTTLALAAIAAILWMVRGLPSPGDIASALNSNPDVYTLSLGHM
TDLTIASFAYLRAPLVVAGIAFAIGAWGAWRQRMVTASLVAMLVFFFHAARMALVVFDPYMSSRPLAEALLDAPPGKLIV
DDQYYTFSSVFFYTNRRAYLLNGRVNNLDYGSYAPDAPKDVFISDDDFRRYWTSNEKFYLLVEAPKAKRLQDLAGAERFH
VQKRSGGKFLFTNF
>Mature_573_residues
AAAIFLGCIVSPPSLMDDVDAVQAQIGRNMLQSGDWVTARLDGVAYLEKSPLKYWMIAVSFMVFGVHDWAARIPIALSTV
LLCWVTARFAAWAFGAREGLYSGLALGTSIGLFLFTRILIPDVMLTLTITLALWGMVRTLEEEEPHPTLWAAGIWVSIAL
GLLLKGLIAAAFPMATGLIYLALTKQLLARRTWQRLRPFSGILLMLVIAAPWHVLATIRNPPYFDFTMHSEKGSYHGFFW
FYFMNEHVLRFLNLRYPRDYNTVPRPLFWLFHLLWFFPWSLYFPAAVKLRYGNTDRTSRVRLLCLCWIGFILTFFTFSTT
QEYYSMPCYPAMAMLLGCAMASGSGWLKWGTRVIAVVTTLALAAIAAILWMVRGLPSPGDIASALNSNPDVYTLSLGHMT
DLTIASFAYLRAPLVVAGIAFAIGAWGAWRQRMVTASLVAMLVFFFHAARMALVVFDPYMSSRPLAEALLDAPPGKLIVD
DQYYTFSSVFFYTNRRAYLLNGRVNNLDYGSYAPDAPKDVFISDDDFRRYWTSNEKFYLLVEAPKAKRLQDLAGAERFHV
QKRSGGKFLFTNF

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=328, Percent_Identity=26.219512195122, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 64771; Mature: 64640

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAIFLGCIVSPPSLMDDVDAVQAQIGRNMLQSGDWVTARLDGVAYLEKSPLKYWMIAV
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCHHHHHHHH
SFMVFGVHDWAARIPIALSTVLLCWVTARFAAWAFGAREGLYSGLALGTSIGLFLFTRIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPDVMLTLTITLALWGMVRTLEEEEPHPTLWAAGIWVSIALGLLLKGLIAAAFPMATGLI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLALTKQLLARRTWQRLRPFSGILLMLVIAAPWHVLATIRNPPYFDFTMHSEKGSYHGFF
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHEEEEECCCCCEEEEEECCCCCCCEEE
WFYFMNEHVLRFLNLRYPRDYNTVPRPLFWLFHLLWFFPWSLYFPAAVKLRYGNTDRTSR
EEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH
VRLLCLCWIGFILTFFTFSTTQEYYSMPCYPAMAMLLGCAMASGSGWLKWGTRVIAVVTT
HHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LALAAIAAILWMVRGLPSPGDIASALNSNPDVYTLSLGHMTDLTIASFAYLRAPLVVAGI
HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
AFAIGAWGAWRQRMVTASLVAMLVFFFHAARMALVVFDPYMSSRPLAEALLDAPPGKLIV
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHCCCCCCEEE
DDQYYTFSSVFFYTNRRAYLLNGRVNNLDYGSYAPDAPKDVFISDDDFRRYWTSNEKFYL
CCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCEEEE
LVEAPKAKRLQDLAGAERFHVQKRSGGKFLFTNF
EEECCCHHHHHHHHCCHHHEEEECCCCCEEEECC
>Mature Secondary Structure 
AAAIFLGCIVSPPSLMDDVDAVQAQIGRNMLQSGDWVTARLDGVAYLEKSPLKYWMIAV
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCHHHHHHHH
SFMVFGVHDWAARIPIALSTVLLCWVTARFAAWAFGAREGLYSGLALGTSIGLFLFTRIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPDVMLTLTITLALWGMVRTLEEEEPHPTLWAAGIWVSIALGLLLKGLIAAAFPMATGLI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLALTKQLLARRTWQRLRPFSGILLMLVIAAPWHVLATIRNPPYFDFTMHSEKGSYHGFF
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHEEEEECCCCCEEEEEECCCCCCCEEE
WFYFMNEHVLRFLNLRYPRDYNTVPRPLFWLFHLLWFFPWSLYFPAAVKLRYGNTDRTSR
EEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH
VRLLCLCWIGFILTFFTFSTTQEYYSMPCYPAMAMLLGCAMASGSGWLKWGTRVIAVVTT
HHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LALAAIAAILWMVRGLPSPGDIASALNSNPDVYTLSLGHMTDLTIASFAYLRAPLVVAGI
HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
AFAIGAWGAWRQRMVTASLVAMLVFFFHAARMALVVFDPYMSSRPLAEALLDAPPGKLIV
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHCCCCCCEEE
DDQYYTFSSVFFYTNRRAYLLNGRVNNLDYGSYAPDAPKDVFISDDDFRRYWTSNEKFYL
CCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCEEEE
LVEAPKAKRLQDLAGAERFHVQKRSGGKFLFTNF
EEECCCHHHHHHHHCCHHHEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA