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The map label for this gene is ybjY [C]

Identifier: 116623196

GI number: 116623196

Start: 5212868

End: 5214175

Strand: Reverse

Name: ybjY [C]

Synonym: Acid_4103

Alternate gene names: 116623196

Gene position: 5214175-5212868 (Counterclockwise)

Preceding gene: 116623197

Following gene: 116623195

Centisome position: 52.32

GC content: 62.46

Gene sequence:

>1308_bases
ATGAGCGCCCCGGCACCCATTCCCTTACCCGTTCCGCCGAGCCCCGCCGCCCCCCTTCTCCACTCGCGGACCCGCGCTCG
GCTGCGTTTCTGGGCCGCGTTCCTGTTCCTTCTTGCCCTCGTGGGCGGATCAGCCGCCGCGGTCTATCGCTTCCGCGAGG
CGCAACCGGCCGCCGTCCTTCCATCCGCGCCCGCGCGCATGGGCGATTTCCTCGTGATCATCCGCTGCCGCGGCGAGCTC
AAAGCCGAGCGCTCCGTCCAGATCTACACTCCCATGGTGCCCAACCTCCGCATCGCCTGGATGACTCCCCCCGGCGTCAA
CGTCCAGCAGGGTGAGTCCATCGTCAAATTCGATTCCTCCAGCGCACAGCAGACGTTGATGCAGAAGGAAGCCGCCCTCC
GCCAGGCTCAGGCCACGCTAGATCAGGCTCTCGCCCAATCCAAAATCACCGCCGAGCAGGATAAGACTGACCTCGCAGAC
GCCGGCTTCACCGTCGAACGCGCCCGCCTCGAAGCCTCCAAACAGGAAATCGTCAGCCGCCTCCAGGGCGAGGAAAGCAA
AATCGATTACGGCGTCGCCCAGCAGAAACAAAAAGTTCAGGAGGCAACCGTCGATCTCCACGCCGCCTCCGATCGCTCCC
GCATCGCCTCCCTCACCCGCCAGCGCGACCAGGCGAAGGCCGATGTCGATATCACCAAAGAGCGCATCGCGCAGATGGAG
CTCAAGTCGCCCCTCTCCGGCTTCCTGATCTTCCAGTCCAACTATTCGCAGGGCTGGATGAACGCCAAGCCTTTCAAGGT
TGGTGACAACGTCTACGCCGGCATGGTCCTCGCCGAAATGCCCGACCTCACCACCATGCTGATGGATGCCAAAGTCGAAG
AGATCGACCGCGGCCGCATCTCCCCCGATCAGGAAGTCCGCGTACGCATCGATTCCCTCCCGGAACTCACGCTCAACGCC
AAGATCCGCCAGATCTCGCTGCTCGCCGAAGCCAGCAATGAATTTCCCCCGGTCCGCAGTTTCCGTGCCTACGCCGCCAT
TCCCAAACCCGACCCCCGCCTCCGCCCAGGCATGAACGGCGGTATGGACATCATCATCAATCGCATTCCCAAGGCCATCA
GTATTCCCGCCAAAGCCCTCTTCACTCATGCCGGCAAGCCCGTCGTCTACCTCGGGGAAAAAGGAAAATATCGCGCCGTG
AACGTCGAGGTCCTCGCCCGCAACCCCGATGAAATCGCCGTCAAAGGCATCCCGGATGGCTCCATGGTGACCCTCATCGA
CCCGGAAAAGAAGGACCAAAAGAAATGA

Upstream 100 bases:

>100_bases
GTTTCACTGCAGTCTTCAAACTCGATAAATCCGCCCCCCAACTTATGCCGGATCTTTCCGCCGCGGTTGTCATCGATACA
CCCGCTACAGAGGCCGCGAA

Downstream 100 bases:

>100_bases
AGCTCCGCACCCTGATCGCCCTCATTTGCGTCCTCGGAATTCTCGGCGCCCTTGCCTGGGGCGCCATGCGCGTCGTCCGT
GCTACCACCGCCACTGCCGC

Product: membrane-fusion protein-like protein

Products: NA

Alternate protein names: Multidrug Resistance Efflux Pump-Like Protein; Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; Secretion Protein HlyD Family Protein; HlyD Family Secretion Protein; RND Family Efflux Transporter MFP Subunit; Macrolide-Specific Efflux Protein MacA; Efflux Transporter Rnd Family Mfp Subunit; RND Family Efflux Transporter; Membrane-Fusion Protein-Like Protein

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MSAPAPIPLPVPPSPAAPLLHSRTRARLRFWAAFLFLLALVGGSAAAVYRFREAQPAAVLPSAPARMGDFLVIIRCRGEL
KAERSVQIYTPMVPNLRIAWMTPPGVNVQQGESIVKFDSSSAQQTLMQKEAALRQAQATLDQALAQSKITAEQDKTDLAD
AGFTVERARLEASKQEIVSRLQGEESKIDYGVAQQKQKVQEATVDLHAASDRSRIASLTRQRDQAKADVDITKERIAQME
LKSPLSGFLIFQSNYSQGWMNAKPFKVGDNVYAGMVLAEMPDLTTMLMDAKVEEIDRGRISPDQEVRVRIDSLPELTLNA
KIRQISLLAEASNEFPPVRSFRAYAAIPKPDPRLRPGMNGGMDIIINRIPKAISIPAKALFTHAGKPVVYLGEKGKYRAV
NVEVLARNPDEIAVKGIPDGSMVTLIDPEKKDQKK

Sequences:

>Translated_435_residues
MSAPAPIPLPVPPSPAAPLLHSRTRARLRFWAAFLFLLALVGGSAAAVYRFREAQPAAVLPSAPARMGDFLVIIRCRGEL
KAERSVQIYTPMVPNLRIAWMTPPGVNVQQGESIVKFDSSSAQQTLMQKEAALRQAQATLDQALAQSKITAEQDKTDLAD
AGFTVERARLEASKQEIVSRLQGEESKIDYGVAQQKQKVQEATVDLHAASDRSRIASLTRQRDQAKADVDITKERIAQME
LKSPLSGFLIFQSNYSQGWMNAKPFKVGDNVYAGMVLAEMPDLTTMLMDAKVEEIDRGRISPDQEVRVRIDSLPELTLNA
KIRQISLLAEASNEFPPVRSFRAYAAIPKPDPRLRPGMNGGMDIIINRIPKAISIPAKALFTHAGKPVVYLGEKGKYRAV
NVEVLARNPDEIAVKGIPDGSMVTLIDPEKKDQKK
>Mature_434_residues
SAPAPIPLPVPPSPAAPLLHSRTRARLRFWAAFLFLLALVGGSAAAVYRFREAQPAAVLPSAPARMGDFLVIIRCRGELK
AERSVQIYTPMVPNLRIAWMTPPGVNVQQGESIVKFDSSSAQQTLMQKEAALRQAQATLDQALAQSKITAEQDKTDLADA
GFTVERARLEASKQEIVSRLQGEESKIDYGVAQQKQKVQEATVDLHAASDRSRIASLTRQRDQAKADVDITKERIAQMEL
KSPLSGFLIFQSNYSQGWMNAKPFKVGDNVYAGMVLAEMPDLTTMLMDAKVEEIDRGRISPDQEVRVRIDSLPELTLNAK
IRQISLLAEASNEFPPVRSFRAYAAIPKPDPRLRPGMNGGMDIIINRIPKAISIPAKALFTHAGKPVVYLGEKGKYRAVN
VEVLARNPDEIAVKGIPDGSMVTLIDPEKKDQKK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47840; Mature: 47709

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPAPIPLPVPPSPAAPLLHSRTRARLRFWAAFLFLLALVGGSAAAVYRFREAQPAAVL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCEEC
PSAPARMGDFLVIIRCRGELKAERSVQIYTPMVPNLRIAWMTPPGVNVQQGESIVKFDSS
CCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCCHHCCCCEEEECCC
SAQQTLMQKEAALRQAQATLDQALAQSKITAEQDKTDLADAGFTVERARLEASKQEIVSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH
LQGEESKIDYGVAQQKQKVQEATVDLHAASDRSRIASLTRQRDQAKADVDITKERIAQME
HCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LKSPLSGFLIFQSNYSQGWMNAKPFKVGDNVYAGMVLAEMPDLTTMLMDAKVEEIDRGRI
HCCCCCEEEEEECCCCCCCCCCCCEECCCCHHHCCHHHHCCCHHHHHHHHHHHHHHCCCC
SPDQEVRVRIDSLPELTLNAKIRQISLLAEASNEFPPVRSFRAYAAIPKPDPRLRPGMNG
CCCHHEEEEECCCCCEEECCHHHEEEEEHHHCCCCCCCHHHHHEECCCCCCCCCCCCCCC
GMDIIINRIPKAISIPAKALFTHAGKPVVYLGEKGKYRAVNVEVLARNPDEIAVKGIPDG
CHHHHHHHCCCHHCCCHHHHHHCCCCCEEEECCCCCEEEEEEEEEECCCCCEEEEECCCC
SMVTLIDPEKKDQKK
CEEEEECCCHHCCCC
>Mature Secondary Structure 
SAPAPIPLPVPPSPAAPLLHSRTRARLRFWAAFLFLLALVGGSAAAVYRFREAQPAAVL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCEEC
PSAPARMGDFLVIIRCRGELKAERSVQIYTPMVPNLRIAWMTPPGVNVQQGESIVKFDSS
CCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCCHHCCCCEEEECCC
SAQQTLMQKEAALRQAQATLDQALAQSKITAEQDKTDLADAGFTVERARLEASKQEIVSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH
LQGEESKIDYGVAQQKQKVQEATVDLHAASDRSRIASLTRQRDQAKADVDITKERIAQME
HCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LKSPLSGFLIFQSNYSQGWMNAKPFKVGDNVYAGMVLAEMPDLTTMLMDAKVEEIDRGRI
HCCCCCEEEEEECCCCCCCCCCCCEECCCCHHHCCHHHHCCCHHHHHHHHHHHHHHCCCC
SPDQEVRVRIDSLPELTLNAKIRQISLLAEASNEFPPVRSFRAYAAIPKPDPRLRPGMNG
CCCHHEEEEECCCCCEEECCHHHEEEEEHHHCCCCCCCHHHHHEECCCCCCCCCCCCCCC
GMDIIINRIPKAISIPAKALFTHAGKPVVYLGEKGKYRAVNVEVLARNPDEIAVKGIPDG
CHHHHHHHCCCHHCCCHHHHHHCCCCCEEEECCCCCEEEEEEEEEECCCCCEEEEECCCC
SMVTLIDPEKKDQKK
CEEEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA