| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623152
Identifier: 116623152
GI number: 116623152
Start: 5150116
End: 5151597
Strand: Reverse
Name: 116623152
Synonym: Acid_4058
Alternate gene names: NA
Gene position: 5151597-5150116 (Counterclockwise)
Preceding gene: 116623156
Following gene: 116623151
Centisome position: 51.69
GC content: 62.35
Gene sequence:
>1482_bases ATGCCTTTTCCCTCGTATTGGTGCTACCTTCTGTTGAATATGGACCGTCGCAAGTTTCTCCGCAATGCGCTCGCCGCCTC CGCCGCAGCCCCGCTCGCGTCGGCGGCCGCCGCCGGCAAGATGATCGGGATCCAGGTCGGCGCCGTCTCCTTCGCCGACG AAGGCGTCGAGAAAGTGCTCGACGAATTTCAGCAGGACGCCTACGTCAACACGCTCTTCGTCGCGACCTTCACCTATGGG CGCGGGATCGCCGGACGACAGGTCCCCGGACAGCCGCTCCCCGACCACGGGAAGCAGGTTTACGACACCGACACGTTCAA GGGTGGCAGCTACACCAAACTCCACCCGGAGTATTACCGCGACACCGTCCTGCGAAATCTGCGAGCGCCCGATCTCGGCG ATTTCGACGTGCTCGAAGCCGTCCTCCCAGCCGCTAAGAAGCGCGGCATGAAGACCATCTGCTGGTTCGAAGACGTCTTC TCGCGCGACACCCCCAATGCGGCCCAGGCACAGGAACGGCAGCTCGACGGGCAGCTCGCCGTCACGCTTTGCTTCAACAA TCCCAACTACCGCAACTTCCTCCTCGGCACGGTCGAGGACTACACCCGCTCCTGGGATATCGACGGCATTATGTGGGGCT CCGAACGCCACGGAGCATTCTCGAATATGACGCGCGGAGTAAATCCCGGCTCGGTCACCTGTTTCTGCGGCTACTGCGAG GAGAAGGCGCGGGGACGCGGCATCAACGTCGCTCGCGCCCGCGCCGGATTCCGCGCGCTCGGTGAGCTGACGCACGGCGG AAAGCGTCCGGTCGATGGCTACTATGTGACGCTCTGGCGCATCATGCTGCGTTACCCGGAGATTCTTGCGTGGGAGAACC TCTGGCACGATAGCCTGCGCGAAACCTACGCGGCGATCTACGCCAAGGTCAAATCGATCAAACCCGAAGTTGGCGTGGGC TGGCACATCTGGCACCAGAATTCCTTCACCCCGATCTACCGCGCCGAGCAGGACCTCAGCGAGCTCGCGAAGTACTCCGA CTTTCTCAAGATGGTGATGTATCACAACTGCGGCGGAGAACGGATGGCCGGCTACATACGCTCCGTCGGACAGACGATTT ATGCCGACGTACCGGGCCAGGAGCTGCTCGATTTCCATTACCGGGTGCTGGATTACCAGAACGAAAAGCCTCTCTCGGAA CTCGCTAAATCCGGCTTCTCCAGCGACTACGTCTATCGCGAAGCAAAACGCGCCCGTGCCGGCCTGGCCGGTGCGAAGAC GCAACTCTGGCCCGGGATTGACATCGATATTCCGACTGCCGCGACGTCTTCGAAGTCCACGCCCGATGGCACGCGCGGTG CCGTGGCGGCGGCCTTCAAAGGCGGCGCGGACGGCGTGATTCTCTCGCGCAAATGGAGCGAGATGAAGAGCGCCAATCTC AAAGGCGCGGGTGCCGCGATCCGCGAGTTGGGACTGGCCTGA
Upstream 100 bases:
>100_bases TCCAGAGACGCAGAGCCGCAGAGTCACGCAGAGAAGAAAGAAACACTTCAAGGGGTTTCTTGCCTTTTCTTCTTCGCGGT ACTCTGCGGCTCTGCGAGAA
Downstream 100 bases:
>100_bases CAATGCGCGTCCTCCTGCTGCTCATCGCGGCTCTCGCGCTGCGCGCCGCGGAATTCCGCGTGACCGACTACGGCGCCAAG GCCGACGGGAAGACGGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MPFPSYWCYLLLNMDRRKFLRNALAASAAAPLASAAAAGKMIGIQVGAVSFADEGVEKVLDEFQQDAYVNTLFVATFTYG RGIAGRQVPGQPLPDHGKQVYDTDTFKGGSYTKLHPEYYRDTVLRNLRAPDLGDFDVLEAVLPAAKKRGMKTICWFEDVF SRDTPNAAQAQERQLDGQLAVTLCFNNPNYRNFLLGTVEDYTRSWDIDGIMWGSERHGAFSNMTRGVNPGSVTCFCGYCE EKARGRGINVARARAGFRALGELTHGGKRPVDGYYVTLWRIMLRYPEILAWENLWHDSLRETYAAIYAKVKSIKPEVGVG WHIWHQNSFTPIYRAEQDLSELAKYSDFLKMVMYHNCGGERMAGYIRSVGQTIYADVPGQELLDFHYRVLDYQNEKPLSE LAKSGFSSDYVYREAKRARAGLAGAKTQLWPGIDIDIPTAATSSKSTPDGTRGAVAAAFKGGADGVILSRKWSEMKSANL KGAGAAIRELGLA
Sequences:
>Translated_493_residues MPFPSYWCYLLLNMDRRKFLRNALAASAAAPLASAAAAGKMIGIQVGAVSFADEGVEKVLDEFQQDAYVNTLFVATFTYG RGIAGRQVPGQPLPDHGKQVYDTDTFKGGSYTKLHPEYYRDTVLRNLRAPDLGDFDVLEAVLPAAKKRGMKTICWFEDVF SRDTPNAAQAQERQLDGQLAVTLCFNNPNYRNFLLGTVEDYTRSWDIDGIMWGSERHGAFSNMTRGVNPGSVTCFCGYCE EKARGRGINVARARAGFRALGELTHGGKRPVDGYYVTLWRIMLRYPEILAWENLWHDSLRETYAAIYAKVKSIKPEVGVG WHIWHQNSFTPIYRAEQDLSELAKYSDFLKMVMYHNCGGERMAGYIRSVGQTIYADVPGQELLDFHYRVLDYQNEKPLSE LAKSGFSSDYVYREAKRARAGLAGAKTQLWPGIDIDIPTAATSSKSTPDGTRGAVAAAFKGGADGVILSRKWSEMKSANL KGAGAAIRELGLA >Mature_492_residues PFPSYWCYLLLNMDRRKFLRNALAASAAAPLASAAAAGKMIGIQVGAVSFADEGVEKVLDEFQQDAYVNTLFVATFTYGR GIAGRQVPGQPLPDHGKQVYDTDTFKGGSYTKLHPEYYRDTVLRNLRAPDLGDFDVLEAVLPAAKKRGMKTICWFEDVFS RDTPNAAQAQERQLDGQLAVTLCFNNPNYRNFLLGTVEDYTRSWDIDGIMWGSERHGAFSNMTRGVNPGSVTCFCGYCEE KARGRGINVARARAGFRALGELTHGGKRPVDGYYVTLWRIMLRYPEILAWENLWHDSLRETYAAIYAKVKSIKPEVGVGW HIWHQNSFTPIYRAEQDLSELAKYSDFLKMVMYHNCGGERMAGYIRSVGQTIYADVPGQELLDFHYRVLDYQNEKPLSEL AKSGFSSDYVYREAKRARAGLAGAKTQLWPGIDIDIPTAATSSKSTPDGTRGAVAAAFKGGADGVILSRKWSEMKSANLK GAGAAIRELGLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54729; Mature: 54597
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPSYWCYLLLNMDRRKFLRNALAASAAAPLASAAAAGKMIGIQVGAVSFADEGVEKVL CCCCCEEHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH DEFQQDAYVNTLFVATFTYGRGIAGRQVPGQPLPDHGKQVYDTDTFKGGSYTKLHPEYYR HHHHHHHHHHHHEEEEEHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEECHHHHH DTVLRNLRAPDLGDFDVLEAVLPAAKKRGMKTICWFEDVFSRDTPNAAQAQERQLDGQLA HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCHHHHHHHHCCCEEE VTLCFNNPNYRNFLLGTVEDYTRSWDIDGIMWGSERHGAFSNMTRGVNPGSVTCFCGYCE EEEEECCCCCCEEEEECHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEEEEECHH EKARGRGINVARARAGFRALGELTHGGKRPVDGYYVTLWRIMLRYPEILAWENLWHDSLR HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ETYAAIYAKVKSIKPEVGVGWHIWHQNSFTPIYRAEQDLSELAKYSDFLKMVMYHNCGGE HHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RMAGYIRSVGQTIYADVPGQELLDFHYRVLDYQNEKPLSELAKSGFSSDYVYREAKRARA HHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHH GLAGAKTQLWPGIDIDIPTAATSSKSTPDGTRGAVAAAFKGGADGVILSRKWSEMKSANL CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHEEECCCCCCEEEECHHHHHHHCCC KGAGAAIRELGLA CCHHHHHHHHCCC >Mature Secondary Structure PFPSYWCYLLLNMDRRKFLRNALAASAAAPLASAAAAGKMIGIQVGAVSFADEGVEKVL CCCCEEHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH DEFQQDAYVNTLFVATFTYGRGIAGRQVPGQPLPDHGKQVYDTDTFKGGSYTKLHPEYYR HHHHHHHHHHHHEEEEEHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEECHHHHH DTVLRNLRAPDLGDFDVLEAVLPAAKKRGMKTICWFEDVFSRDTPNAAQAQERQLDGQLA HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCHHHHHHHHCCCEEE VTLCFNNPNYRNFLLGTVEDYTRSWDIDGIMWGSERHGAFSNMTRGVNPGSVTCFCGYCE EEEEECCCCCCEEEEECHHHHHHCCCCCEEEECCCCCCCHHHHHCCCCCCCEEEEEECHH EKARGRGINVARARAGFRALGELTHGGKRPVDGYYVTLWRIMLRYPEILAWENLWHDSLR HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ETYAAIYAKVKSIKPEVGVGWHIWHQNSFTPIYRAEQDLSELAKYSDFLKMVMYHNCGGE HHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RMAGYIRSVGQTIYADVPGQELLDFHYRVLDYQNEKPLSELAKSGFSSDYVYREAKRARA HHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHH GLAGAKTQLWPGIDIDIPTAATSSKSTPDGTRGAVAAAFKGGADGVILSRKWSEMKSANL CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHEEECCCCCCEEEECHHHHHHHCCC KGAGAAIRELGLA CCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA