| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623127
Identifier: 116623127
GI number: 116623127
Start: 5114953
End: 5116989
Strand: Reverse
Name: 116623127
Synonym: Acid_4033
Alternate gene names: NA
Gene position: 5116989-5114953 (Counterclockwise)
Preceding gene: 116623128
Following gene: 116623122
Centisome position: 51.35
GC content: 61.02
Gene sequence:
>2037_bases ATGTACAGGCTCGCAGCCGCCGTTTCCCTGACACTCTGCCTCGCCGGGCAGCAGCAGGAGATCACCACCTTCAAGGCCAC CACGAAGTTGGTGGTGGTGGACGTCTTTGTCCGCGCCAGGAACGGCAAGGCCATCGACACGCTGAAGAAAGAGGATTTCA CGGTTCTCGAAGACGGCAAGCCTCGGGAGATCGCAATCTTCGAGTTCCAGCGCATCTCCGAGGAGAAAGCCGAACCCGCG GCCGTTGCGTCCCGGCCGGCCGTTCCCGCGCGCGCCAATACCATCAACGTGCAATCCGCCGGCAGGGTGCAATACAAGGA TAAGCGCCTGTTGGTGCTGTTCTTCGACTTCTCTTCGATGCAGCCCCAGGAGCAGATTCGCGCGCAGCAATCCGCGCTCA AGTTCCTCGGCGAGCAGATGACGGCGTCGGACATGGTGGCGATCATGACCCTCGGCGCGACGGTTCAAGTTGCACAGGAT TTCACCGCCGACCGCGACCGCCTCACCCAGGTGATCAAGAGCTTCCACATCGGCGACTCCAGCGAACTGGCGATCGAGGC CGACACCGGCGATGCCAATAGCGGCGAATATACCGGCGCTGCCTTCATCGCTGACGAGACCGAATTCAACATCTTCAATA CTGATCGCAAACTTGCCGCCCTGGAGACCGCCGTACGCCTGCTGGCGCCGCTTCCCGAGAAGAAAGCCCTGATCTACTTC TCCGCCGGCATCCCCAAGACCGGCGTCGAAAATCACTCGCAACTCGAAGCCACCGTCAACGCCGCGATCCGTGCCAACGT CTCTTTCTATCCGATCGATGCGCGCGGCCTGGTGGCGCTGGCCCCCGGCGGCGATGCCAGTAAGGCCACTCCGCGCGGCT CGCAGGTCTTCACCGGCCAGGCGATCACCACGCAGAAGACCAAGTTTAACGACGCGCAGGAAACCCTGTTCACGCTTGCC GATGATACCGGCGGCAAAGCCCTGCTCGATTCCAATGACCTCACGCTCGGCATCCAGCAGGCGCACGCCGACCTGGGCAG TTACTACGTGCTCGGATACTACGACAGCAATCCCGTGGCCGACGGCAAATTCCGTCGCGTGCAGGTCAATGTTCCCAAGC ATTATGCCGCGCAACTCGACTACCGCGGCGGCTATTTCGCCGGCAAGGAATTCAGCAAATCGTCCTCCAATGACAAAGAG CGTCAGCTCCAGGAGGCCCTGGTGTTGGGAGACCCGGTCACGGATCTGCCGATGGCGCTCGAGATCAACTATTTCCGCCT GGTGGGCGACCATTACTTCGTGCCGGTGGCGGTGAAAATTGCGGGCGCCGGCGATACCAGGGAACTCGACTTCGTCGGCC AGGTCACGGACACGAAAGGGCAGATCAAAGGCAACGTTCGCGACACCATTAAGGTCAAGATAGGCGAGGGTGCGGCGCAG CTTGCCAGTAAGAACATCCAGTACGACACCGGCTTCACGCTTTCGCCGGGTAAGTATCGTCTGAAGTTTCTGGTGCGCGA GAATCAGGGCGGCAAGATGGGGACCTTCGAGACCGATTTCGTGGTGCCCAATCTGAATGCCGATACAAAGAGCCTGCGCG TCAGCTCGGTCGTATGGTCCGGACAACGGCAAAATGTCACTGACGCCATCGGCTCCGGCGCCAATCAGAAACTCCTGGTC GATCACCCGCTGGTGCAGGATGGCCAGAAACTGATCCCCAGCATCACCCGCGCGCTTTCCACGAAGCAGAATCTCTTCGT CTATTTCGAAGTCTACGACCCCGTGCAGCAAAACGGCGCCAAGACGGCCCGGGTCGTCGCGGAGGTAACTTTCTACCGCC AGGGACGCAAGGCCTTCGAATCGGCGCCGGTGCAGCTGACCACGCTTTCCCCCCACCGCCAAGGCACCATGCCCGTGCAA TTCCAGGTGCCGCTGAGTTCGCTCAAGCCCGGCCGCTACACCTGCCAGGTCAGCGTAATCGATGAGAACGCCCGCAAATT CGAGTTCCTGCGAGCCCCGCTGGTTGTGCTGCCGTAG
Upstream 100 bases:
>100_bases CCGTACTGAACTCCCTGAATTACGGCCTTCCCACAGTGGCATTGCCGATGAGGTCATTCAGGGCTACGTTGCGATACAAG TTCTGACCAGGAGATTCAGT
Downstream 100 bases:
>100_bases TAAGCCAACGCGCAACCCGCGTCATCGCCCTCACACGGAGCCGCGACCGTAGTAAGGGAGCGGTCGGTAATCTCTGGAGA TTGCTCCCATGAAACTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MYRLAAAVSLTLCLAGQQQEITTFKATTKLVVVDVFVRARNGKAIDTLKKEDFTVLEDGKPREIAIFEFQRISEEKAEPA AVASRPAVPARANTINVQSAGRVQYKDKRLLVLFFDFSSMQPQEQIRAQQSALKFLGEQMTASDMVAIMTLGATVQVAQD FTADRDRLTQVIKSFHIGDSSELAIEADTGDANSGEYTGAAFIADETEFNIFNTDRKLAALETAVRLLAPLPEKKALIYF SAGIPKTGVENHSQLEATVNAAIRANVSFYPIDARGLVALAPGGDASKATPRGSQVFTGQAITTQKTKFNDAQETLFTLA DDTGGKALLDSNDLTLGIQQAHADLGSYYVLGYYDSNPVADGKFRRVQVNVPKHYAAQLDYRGGYFAGKEFSKSSSNDKE RQLQEALVLGDPVTDLPMALEINYFRLVGDHYFVPVAVKIAGAGDTRELDFVGQVTDTKGQIKGNVRDTIKVKIGEGAAQ LASKNIQYDTGFTLSPGKYRLKFLVRENQGGKMGTFETDFVVPNLNADTKSLRVSSVVWSGQRQNVTDAIGSGANQKLLV DHPLVQDGQKLIPSITRALSTKQNLFVYFEVYDPVQQNGAKTARVVAEVTFYRQGRKAFESAPVQLTTLSPHRQGTMPVQ FQVPLSSLKPGRYTCQVSVIDENARKFEFLRAPLVVLP
Sequences:
>Translated_678_residues MYRLAAAVSLTLCLAGQQQEITTFKATTKLVVVDVFVRARNGKAIDTLKKEDFTVLEDGKPREIAIFEFQRISEEKAEPA AVASRPAVPARANTINVQSAGRVQYKDKRLLVLFFDFSSMQPQEQIRAQQSALKFLGEQMTASDMVAIMTLGATVQVAQD FTADRDRLTQVIKSFHIGDSSELAIEADTGDANSGEYTGAAFIADETEFNIFNTDRKLAALETAVRLLAPLPEKKALIYF SAGIPKTGVENHSQLEATVNAAIRANVSFYPIDARGLVALAPGGDASKATPRGSQVFTGQAITTQKTKFNDAQETLFTLA DDTGGKALLDSNDLTLGIQQAHADLGSYYVLGYYDSNPVADGKFRRVQVNVPKHYAAQLDYRGGYFAGKEFSKSSSNDKE RQLQEALVLGDPVTDLPMALEINYFRLVGDHYFVPVAVKIAGAGDTRELDFVGQVTDTKGQIKGNVRDTIKVKIGEGAAQ LASKNIQYDTGFTLSPGKYRLKFLVRENQGGKMGTFETDFVVPNLNADTKSLRVSSVVWSGQRQNVTDAIGSGANQKLLV DHPLVQDGQKLIPSITRALSTKQNLFVYFEVYDPVQQNGAKTARVVAEVTFYRQGRKAFESAPVQLTTLSPHRQGTMPVQ FQVPLSSLKPGRYTCQVSVIDENARKFEFLRAPLVVLP >Mature_678_residues MYRLAAAVSLTLCLAGQQQEITTFKATTKLVVVDVFVRARNGKAIDTLKKEDFTVLEDGKPREIAIFEFQRISEEKAEPA AVASRPAVPARANTINVQSAGRVQYKDKRLLVLFFDFSSMQPQEQIRAQQSALKFLGEQMTASDMVAIMTLGATVQVAQD FTADRDRLTQVIKSFHIGDSSELAIEADTGDANSGEYTGAAFIADETEFNIFNTDRKLAALETAVRLLAPLPEKKALIYF SAGIPKTGVENHSQLEATVNAAIRANVSFYPIDARGLVALAPGGDASKATPRGSQVFTGQAITTQKTKFNDAQETLFTLA DDTGGKALLDSNDLTLGIQQAHADLGSYYVLGYYDSNPVADGKFRRVQVNVPKHYAAQLDYRGGYFAGKEFSKSSSNDKE RQLQEALVLGDPVTDLPMALEINYFRLVGDHYFVPVAVKIAGAGDTRELDFVGQVTDTKGQIKGNVRDTIKVKIGEGAAQ LASKNIQYDTGFTLSPGKYRLKFLVRENQGGKMGTFETDFVVPNLNADTKSLRVSSVVWSGQRQNVTDAIGSGANQKLLV DHPLVQDGQKLIPSITRALSTKQNLFVYFEVYDPVQQNGAKTARVVAEVTFYRQGRKAFESAPVQLTTLSPHRQGTMPVQ FQVPLSSLKPGRYTCQVSVIDENARKFEFLRAPLVVLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74189; Mature: 74189
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRLAAAVSLTLCLAGQQQEITTFKATTKLVVVDVFVRARNGKAIDTLKKEDFTVLEDGK CCCHHHHHEEEEEECCCCCCEEEEEHHEEEEEEEEEEEECCCCEEECCCCCCCEEECCCC PREIAIFEFQRISEEKAEPAAVASRPAVPARANTINVQSAGRVQYKDKRLLVLFFDFSSM CCEEEEEEEHHHHHHCCCCCHHCCCCCCCCCCCEEEECCCCCEEECCCEEEEEEEECCCC QPQEQIRAQQSALKFLGEQMTASDMVAIMTLGATVQVAQDFTADRDRLTQVIKSFHIGDS CHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCEEEEHHHCCCCHHHHHHHHHHHCCCCC SELAIEADTGDANSGEYTGAAFIADETEFNIFNTDRKLAALETAVRLLAPLPEKKALIYF CCEEEEECCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEE SAGIPKTGVENHSQLEATVNAAIRANVSFYPIDARGLVALAPGGDASKATPRGSQVFTGQ ECCCCCCCCCCCHHHHHEEEEEEEECEEEEEECCCCEEEECCCCCCCCCCCCCCEEEECC AITTQKTKFNDAQETLFTLADDTGGKALLDSNDLTLGIQQAHADLGSYYVLGYYDSNPVA EEEECCCCCCCHHHEEEEEECCCCCEEEECCCCCEEEEEHHHCCCCCEEEEEEECCCCCC DGKFRRVQVNVPKHYAAQLDYRGGYFAGKEFSKSSSNDKERQLQEALVLGDPVTDLPMAL CCCEEEEEEECCCCEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEE EINYFRLVGDHYFVPVAVKIAGAGDTRELDFVGQVTDTKGQIKGNVRDTIKVKIGEGAAQ EEEEEEEECCCEEEEEEEEEECCCCCEEEEEEEEEECCCCEEECCCEEEEEEEECCCHHH LASKNIQYDTGFTLSPGKYRLKFLVRENQGGKMGTFETDFVVPNLNADTKSLRVSSVVWS HHHCCCEECCCEEECCCCEEEEEEEEECCCCCCCCEECCEEEECCCCCCHHEEEEEEEEC GQRQNVTDAIGSGANQKLLVDHPLVQDGQKLIPSITRALSTKQNLFVYFEVYDPVQQNGA CCCCCHHHHHCCCCCCEEEEECCCHHCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHCCC KTARVVAEVTFYRQGRKAFESAPVQLTTLSPHRQGTMPVQFQVPLSSLKPGRYTCQVSVI HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCHHHCCCCCEEEEEEEE DENARKFEFLRAPLVVLP CCCCHHHHHHHCCEEECC >Mature Secondary Structure MYRLAAAVSLTLCLAGQQQEITTFKATTKLVVVDVFVRARNGKAIDTLKKEDFTVLEDGK CCCHHHHHEEEEEECCCCCCEEEEEHHEEEEEEEEEEEECCCCEEECCCCCCCEEECCCC PREIAIFEFQRISEEKAEPAAVASRPAVPARANTINVQSAGRVQYKDKRLLVLFFDFSSM CCEEEEEEEHHHHHHCCCCCHHCCCCCCCCCCCEEEECCCCCEEECCCEEEEEEEECCCC QPQEQIRAQQSALKFLGEQMTASDMVAIMTLGATVQVAQDFTADRDRLTQVIKSFHIGDS CHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCEEEEHHHCCCCHHHHHHHHHHHCCCCC SELAIEADTGDANSGEYTGAAFIADETEFNIFNTDRKLAALETAVRLLAPLPEKKALIYF CCEEEEECCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEE SAGIPKTGVENHSQLEATVNAAIRANVSFYPIDARGLVALAPGGDASKATPRGSQVFTGQ ECCCCCCCCCCCHHHHHEEEEEEEECEEEEEECCCCEEEECCCCCCCCCCCCCCEEEECC AITTQKTKFNDAQETLFTLADDTGGKALLDSNDLTLGIQQAHADLGSYYVLGYYDSNPVA EEEECCCCCCCHHHEEEEEECCCCCEEEECCCCCEEEEEHHHCCCCCEEEEEEECCCCCC DGKFRRVQVNVPKHYAAQLDYRGGYFAGKEFSKSSSNDKERQLQEALVLGDPVTDLPMAL CCCEEEEEEECCCCEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEE EINYFRLVGDHYFVPVAVKIAGAGDTRELDFVGQVTDTKGQIKGNVRDTIKVKIGEGAAQ EEEEEEEECCCEEEEEEEEEECCCCCEEEEEEEEEECCCCEEECCCEEEEEEEECCCHHH LASKNIQYDTGFTLSPGKYRLKFLVRENQGGKMGTFETDFVVPNLNADTKSLRVSSVVWS HHHCCCEECCCEEECCCCEEEEEEEEECCCCCCCCEECCEEEECCCCCCHHEEEEEEEEC GQRQNVTDAIGSGANQKLLVDHPLVQDGQKLIPSITRALSTKQNLFVYFEVYDPVQQNGA CCCCCHHHHHCCCCCCEEEEECCCHHCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHCCC KTARVVAEVTFYRQGRKAFESAPVQLTTLSPHRQGTMPVQFQVPLSSLKPGRYTCQVSVI HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCHHHCCCCCEEEEEEEE DENARKFEFLRAPLVVLP CCCCHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA