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The map label for this gene is ytlA [H]

Identifier: 116623119

GI number: 116623119

Start: 5103011

End: 5103820

Strand: Reverse

Name: ytlA [H]

Synonym: Acid_4025

Alternate gene names: 116623119

Gene position: 5103820-5103011 (Counterclockwise)

Preceding gene: 116623120

Following gene: 116623111

Centisome position: 51.21

GC content: 61.98

Gene sequence:

>810_bases
ATGCGCATCCGCGTTACGGCGTCGCGCCACTCGGCCTTCTACAGTCCCCTTCTTTCGTGCATTCACCGGTTACGCGGCCA
AGGGCATGAAGTACCTTATAGTGTGCTCGGGGCGGGACAGCGGAGTTACGCGCTGATCCGCGACGGCGCCACCGACATCA
TGCAATCGGCAGTATCTTCCAATTGGAATGGCCGGGAGATGGGAGTGGAACCGCTTCCAGTACACTTCGCGCAGATCAAC
CAGCGCGACGGATTTTTCCTGGCAGCGCGTGAGCCCGAGCCTGGATTCGAGTGGAAGCAACTGGAAGGGCGCACGCTGCT
TGCCGACCAGGGCGCGCAGCCGCTCGCGATGTTGAAGTACGCGGTGCGTGAAAACGGCGTCGAGTGGAAAAAGATCAAGG
TGGTCCGCTCCGGGACCGCCGACTATGTCCACCAACAGGCGCCGATCGCCACCGGAGAGATTGTGGCGTCGGTAGGGGCT
TCGATGCCGCCGGTGGCCTTCAGCAGCCTTTGCTGCTCGCGCGAATACCAGAAGTCGGAGGGCTATCGCGTGTTCCTCAA
TGAGTATGCCCAGGCCCGCGAATGGGTGCGAACTGCACCGGCCGCGGAGGTGGCACAGCAAGTGGCTTCGTTCTTCCCGG
ACGTCTCGGCGGAGCGTGTGACGGAGGCGGTTCAGCGCTATCAGGCGCTCGGCTGCTGGGAAGGCGGGGTTGAGATTCCG
CGCGATTTGTATGAGCAGGCGCTGAATGTCTTTCAAGCTACCGGGGCGATTGCATGGCGGCATAAGTACGAAGAAGTGGT
GTCGGCGTAG

Upstream 100 bases:

>100_bases
CGTGCGCGCCGATCTTCACGCCGGCATCTGGTGGGGCGCGCTGCTCCTCATCCTGGGGGCGGTTTACTCGGTTAAGTTCC
GTCCGGGCAAGCTGTAAGGC

Downstream 100 bases:

>100_bases
GGACACACTTATGCCGTTAGTGTGAGTGGTACTTGTTCGTTGCGGCGGCCGGGGACATACGGTCTTATCGCCGGGTGGGG
CCCGGCCTCCAGTGATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRIRVTASRHSAFYSPLLSCIHRLRGQGHEVPYSVLGAGQRSYALIRDGATDIMQSAVSSNWNGREMGVEPLPVHFAQIN
QRDGFFLAAREPEPGFEWKQLEGRTLLADQGAQPLAMLKYAVRENGVEWKKIKVVRSGTADYVHQQAPIATGEIVASVGA
SMPPVAFSSLCCSREYQKSEGYRVFLNEYAQAREWVRTAPAAEVAQQVASFFPDVSAERVTEAVQRYQALGCWEGGVEIP
RDLYEQALNVFQATGAIAWRHKYEEVVSA

Sequences:

>Translated_269_residues
MRIRVTASRHSAFYSPLLSCIHRLRGQGHEVPYSVLGAGQRSYALIRDGATDIMQSAVSSNWNGREMGVEPLPVHFAQIN
QRDGFFLAAREPEPGFEWKQLEGRTLLADQGAQPLAMLKYAVRENGVEWKKIKVVRSGTADYVHQQAPIATGEIVASVGA
SMPPVAFSSLCCSREYQKSEGYRVFLNEYAQAREWVRTAPAAEVAQQVASFFPDVSAERVTEAVQRYQALGCWEGGVEIP
RDLYEQALNVFQATGAIAWRHKYEEVVSA
>Mature_269_residues
MRIRVTASRHSAFYSPLLSCIHRLRGQGHEVPYSVLGAGQRSYALIRDGATDIMQSAVSSNWNGREMGVEPLPVHFAQIN
QRDGFFLAAREPEPGFEWKQLEGRTLLADQGAQPLAMLKYAVRENGVEWKKIKVVRSGTADYVHQQAPIATGEIVASVGA
SMPPVAFSSLCCSREYQKSEGYRVFLNEYAQAREWVRTAPAAEVAQQVASFFPDVSAERVTEAVQRYQALGCWEGGVEIP
RDLYEQALNVFQATGAIAWRHKYEEVVSA

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 29925; Mature: 29925

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRVTASRHSAFYSPLLSCIHRLRGQGHEVPYSVLGAGQRSYALIRDGATDIMQSAVSS
CEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHC
NWNGREMGVEPLPVHFAQINQRDGFFLAAREPEPGFEWKQLEGRTLLADQGAQPLAMLKY
CCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCEEECCCCCCHHHHHHH
AVRENGVEWKKIKVVRSGTADYVHQQAPIATGEIVASVGASMPPVAFSSLCCSREYQKSE
HHHHCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
GYRVFLNEYAQAREWVRTAPAAEVAQQVASFFPDVSAERVTEAVQRYQALGCWEGGVEIP
CCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
RDLYEQALNVFQATGAIAWRHKYEEVVSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIRVTASRHSAFYSPLLSCIHRLRGQGHEVPYSVLGAGQRSYALIRDGATDIMQSAVSS
CEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHC
NWNGREMGVEPLPVHFAQINQRDGFFLAAREPEPGFEWKQLEGRTLLADQGAQPLAMLKY
CCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCEEECCCCCCHHHHHHH
AVRENGVEWKKIKVVRSGTADYVHQQAPIATGEIVASVGASMPPVAFSSLCCSREYQKSE
HHHHCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
GYRVFLNEYAQAREWVRTAPAAEVAQQVASFFPDVSAERVTEAVQRYQALGCWEGGVEIP
CCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
RDLYEQALNVFQATGAIAWRHKYEEVVSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]