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The map label for this gene is 116623053

Identifier: 116623053

GI number: 116623053

Start: 5011052

End: 5012062

Strand: Reverse

Name: 116623053

Synonym: Acid_3957

Alternate gene names: NA

Gene position: 5012062-5011052 (Counterclockwise)

Preceding gene: 116623055

Following gene: 116623050

Centisome position: 50.29

GC content: 65.48

Gene sequence:

>1011_bases
ATGGTTGCGAGGGTTGCTGTTTGTCTGTTGCTTGCGGGGTTACCGGCGGCCTGCGCCGAATGGAATCCCAAACTGGCGGC
GCAATATCTGGATTCGCGGCAGCAGGAATGGTTCGCATGGCCGCGCGCGAATGCGGGCGCCAAGCCGTGCGTCTCCTGCC
ATACCGGCGTGACCTATCTGATGGTGCGTCCCGCGCTGCGCAAGGTGTTGGGCGAAAGCGAGCCCACGCGGTATGAGACG
GGACTGCTGAATTCACTCACCGAGCGGGTGGCAAAACGCGAACCCGCGGCAGCGCCCTCGATCGGTGTGGAATCGGTGCT
GGCGGCGCTCTTCCTTGGCGGCGGACGATCGGCCGCCTCCGCGCAGGCACTCGACCGGATGTGGGCGCTGCAGACGAAGG
AAGGGAAGGCGAGGGGCGCGTGGAACTGGTTCAGCCTCGACGATGATCCCTGGGAGATGCCGGAATCGAACTTCTACGGC
GCGACATTGGCGGCGATCGCGGTGGGCGGCGCGCCGGCGGAATATCGCGCGCGTCCTGAAGTGAAGGAGCGCGTCGCGGA
CCTGGCGGCGTTTCTGCGCAGCGGTCAGGAGTCGCAGCCTCTGCACAATCGTGTGATGCTGCTGTGGGCGTCGTCGAAGC
TGCCCGAAGTGGTGTCCGGGGATGCGCGGAAGTCGATCGTAGCTGAATTGTGGAAGCGGCAGCAGGCGGACGGCGGGTGG
ACGATGGCGTCGCTCGGTCCGTTCGCTGTGCACGAAAAGGCGCCGCGCCAGGAGGGCAGCAACGCCTATGCGACTGCGGT
GGTCGCGTTGGTATTGCAGCGCGCGGAAGGCGCGAGTCCGAAATTGGGAAAGGCCCTTGCCTGGCTCCGGACGCGGCAGG
ATCCCGAGGGAGGGTACTGGTCGGCGGAGTCGATGAACAAGCAGTATCCGGCGGGCTCGATGGAGATTAAGTTCATGCGA
GACGCGGCCACGGCGTACGCGTCGCTGGCATTGCTGGAAGCCTCGAATTAG

Upstream 100 bases:

>100_bases
CTTCGCGATGTAGACGAGGACCGCCTCTTTGCCTTCAAAATACGCTGGGGCTTGCTTCATGAGCGCTATGTTTCCAGTGT
ATCGGGTAAACTGGGCGGAT

Downstream 100 bases:

>100_bases
ATGAGGGGCGGACTCCTGGGTCCGCGCCTTCCTATCGAGGTAACACCGAAGGACGACGAGGGCGTCAGTGCGGCGAAGTT
GGATGAGGGGCGCGCGGTCA

Product: putative squalene-hopene cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MVARVAVCLLLAGLPAACAEWNPKLAAQYLDSRQQEWFAWPRANAGAKPCVSCHTGVTYLMVRPALRKVLGESEPTRYET
GLLNSLTERVAKREPAAAPSIGVESVLAALFLGGGRSAASAQALDRMWALQTKEGKARGAWNWFSLDDDPWEMPESNFYG
ATLAAIAVGGAPAEYRARPEVKERVADLAAFLRSGQESQPLHNRVMLLWASSKLPEVVSGDARKSIVAELWKRQQADGGW
TMASLGPFAVHEKAPRQEGSNAYATAVVALVLQRAEGASPKLGKALAWLRTRQDPEGGYWSAESMNKQYPAGSMEIKFMR
DAATAYASLALLEASN

Sequences:

>Translated_336_residues
MVARVAVCLLLAGLPAACAEWNPKLAAQYLDSRQQEWFAWPRANAGAKPCVSCHTGVTYLMVRPALRKVLGESEPTRYET
GLLNSLTERVAKREPAAAPSIGVESVLAALFLGGGRSAASAQALDRMWALQTKEGKARGAWNWFSLDDDPWEMPESNFYG
ATLAAIAVGGAPAEYRARPEVKERVADLAAFLRSGQESQPLHNRVMLLWASSKLPEVVSGDARKSIVAELWKRQQADGGW
TMASLGPFAVHEKAPRQEGSNAYATAVVALVLQRAEGASPKLGKALAWLRTRQDPEGGYWSAESMNKQYPAGSMEIKFMR
DAATAYASLALLEASN
>Mature_336_residues
MVARVAVCLLLAGLPAACAEWNPKLAAQYLDSRQQEWFAWPRANAGAKPCVSCHTGVTYLMVRPALRKVLGESEPTRYET
GLLNSLTERVAKREPAAAPSIGVESVLAALFLGGGRSAASAQALDRMWALQTKEGKARGAWNWFSLDDDPWEMPESNFYG
ATLAAIAVGGAPAEYRARPEVKERVADLAAFLRSGQESQPLHNRVMLLWASSKLPEVVSGDARKSIVAELWKRQQADGGW
TMASLGPFAVHEKAPRQEGSNAYATAVVALVLQRAEGASPKLGKALAWLRTRQDPEGGYWSAESMNKQYPAGSMEIKFMR
DAATAYASLALLEASN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36376; Mature: 36376

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARVAVCLLLAGLPAACAEWNPKLAAQYLDSRQQEWFAWPRANAGAKPCVSCHTGVTYL
CHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHH
MVRPALRKVLGESEPTRYETGLLNSLTERVAKREPAAAPSIGVESVLAALFLGGGRSAAS
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHH
AQALDRMWALQTKEGKARGAWNWFSLDDDPWEMPESNFYGATLAAIAVGGAPAEYRARPE
HHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCHH
VKERVADLAAFLRSGQESQPLHNRVMLLWASSKLPEVVSGDARKSIVAELWKRQQADGGW
HHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCCCCCE
TMASLGPFAVHEKAPRQEGSNAYATAVVALVLQRAEGASPKLGKALAWLRTRQDPEGGYW
EHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
SAESMNKQYPAGSMEIKFMRDAATAYASLALLEASN
CHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MVARVAVCLLLAGLPAACAEWNPKLAAQYLDSRQQEWFAWPRANAGAKPCVSCHTGVTYL
CHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHH
MVRPALRKVLGESEPTRYETGLLNSLTERVAKREPAAAPSIGVESVLAALFLGGGRSAAS
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHH
AQALDRMWALQTKEGKARGAWNWFSLDDDPWEMPESNFYGATLAAIAVGGAPAEYRARPE
HHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCHH
VKERVADLAAFLRSGQESQPLHNRVMLLWASSKLPEVVSGDARKSIVAELWKRQQADGGW
HHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHCCCCCE
TMASLGPFAVHEKAPRQEGSNAYATAVVALVLQRAEGASPKLGKALAWLRTRQDPEGGYW
EHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
SAESMNKQYPAGSMEIKFMRDAATAYASLALLEASN
CHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA