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The map label for this gene is 116623026

Identifier: 116623026

GI number: 116623026

Start: 4967803

End: 4969218

Strand: Reverse

Name: 116623026

Synonym: Acid_3930

Alternate gene names: NA

Gene position: 4969218-4967803 (Counterclockwise)

Preceding gene: 116623027

Following gene: 116623024

Centisome position: 49.86

GC content: 60.24

Gene sequence:

>1416_bases
ATGCATATGAAATGGATGACAGCGGGAGCGGTAGGGATACTCGCACTCGCAAGCAGTGTTGCGAACGCACAGCCCCCGGC
CGGCGGGCGCGGCGGCCGTGGTGGTATGGCCCCCGCGCTATTCAACGCGCTCGATAAAGATAAGGACGGCTCGGTTTCGC
GAGCCGAGCTGAAGGATACATTTAACGCCTGGTTCACCGCCGCCGATACCGCGAAGAGCGGCGCGGTGAACGAAGCTCAG
CTCGTGACGGCTCTTCTTACGGTGTTTCCTCTCCCGGCTCCGGGCGGCTTCCAAACTTGGGGTAACTCCACGCCGATGAC
AACGCCCCAGGCGAACATTGATGCCATGTTGGCAGCCCTGCCGGCTATACCTGGCGCCAAGCCCGCGCGTGCCCGCAAGG
TCCTCGTGTTTGCGCATACCGGTGAGTTTGGATTCGTGCACTCGTCGATTCCCATGGCTGCGAAGACCGTGGAAGCGCTC
GGCAACAAGGGAGACTTGTGGTCCACGACAATCAGCTACAGTCTGGCGGACATCAACACCAACAACCTGAAGCAGTACGA
TGCCATTTTCCTCGATAGCACCACGGCCTGTTTCCTGGACGACGCCGACGCGGCAGCCACGGCGGCGCGTCGCGCGGCGT
TCCTCGATTTCGTGAGAAGCGGTAAGGGCGTTGCCGGCATTCACGCCGCCACCGACTCCTACCATTGGGATTGCGCCGAA
CAGAGCAAGCTTGCCGCGGCCGCTCCGCACAACGATGCCGCGCATGTGCTGGCTACTCAGATGATTGCACAGGGCGATTC
AAACGGCGACAAAAAGATCAGCCGCCAGGAACTCGCCACGCTGGCCGATGCGTGGTACGACAAGCTGGACACCGAGAAGG
CGGGCAAGCTGGTGCAGGCTGACTTGACGGCGCGCCTGAACACGGCGGTTCCCCCACCCCCTCGTGCACAGCAGCCCGGT
TCCAACGCCGATGTCCACGGCTGGCCCGAGTTCAATACTCTGATCGGCGGGTTCTTTAAGTTCCATTGGAGCGATCCGCA
GCTCATCACTACGAAGATTGACGACCCGGCGAGCCCGCTCACCGCGATGTTCCACGGTCAGGAATTCGAAATCCACGATG
AGACCTATACGCTCGCCGAAGATTCCTATTCCCGCAAGAACGTTCATGTGCTGACCAGCATCGATTACGCCAAGATGAGC
GATGCGGATAAGGCGAAGGAGCGGAATCCGCGTTCGGACGGCGACTATGCCCTCAGCTACATTCGCAAGGAAGGCAAGGG
CCTCGTGTTCTACGAAGGCCATGGCCACAATGAAAAGGCGTTATACACCATGACGCCGATGCTGGAGCACCTGCGTGCAG
GCATTCAGTATGCGATCGGCGATTTGAAAGCCGATGACAGCCCGTCTGTGAAGTAA

Upstream 100 bases:

>100_bases
CGCCGAGCCTTCATCGACCTGCATAGCCCCAATCAGGTCGCCCGGAGTTAGATATCTTAACGCCGTGCGATAGACTATTT
CACAGTACGGAGACTCGTCG

Downstream 100 bases:

>100_bases
ACTCTACATTCGGCGCCGGCCCAGTAACGCTCGCGTGGCCACCTTTTGGGGCAGGCAATCCTGCCGGTCGCGATGGGGAT
GAAAACCCCTTTTGTACTAC

Product: calcium-binding EF-hand-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MHMKWMTAGAVGILALASSVANAQPPAGGRGGRGGMAPALFNALDKDKDGSVSRAELKDTFNAWFTAADTAKSGAVNEAQ
LVTALLTVFPLPAPGGFQTWGNSTPMTTPQANIDAMLAALPAIPGAKPARARKVLVFAHTGEFGFVHSSIPMAAKTVEAL
GNKGDLWSTTISYSLADINTNNLKQYDAIFLDSTTACFLDDADAAATAARRAAFLDFVRSGKGVAGIHAATDSYHWDCAE
QSKLAAAAPHNDAAHVLATQMIAQGDSNGDKKISRQELATLADAWYDKLDTEKAGKLVQADLTARLNTAVPPPPRAQQPG
SNADVHGWPEFNTLIGGFFKFHWSDPQLITTKIDDPASPLTAMFHGQEFEIHDETYTLAEDSYSRKNVHVLTSIDYAKMS
DADKAKERNPRSDGDYALSYIRKEGKGLVFYEGHGHNEKALYTMTPMLEHLRAGIQYAIGDLKADDSPSVK

Sequences:

>Translated_471_residues
MHMKWMTAGAVGILALASSVANAQPPAGGRGGRGGMAPALFNALDKDKDGSVSRAELKDTFNAWFTAADTAKSGAVNEAQ
LVTALLTVFPLPAPGGFQTWGNSTPMTTPQANIDAMLAALPAIPGAKPARARKVLVFAHTGEFGFVHSSIPMAAKTVEAL
GNKGDLWSTTISYSLADINTNNLKQYDAIFLDSTTACFLDDADAAATAARRAAFLDFVRSGKGVAGIHAATDSYHWDCAE
QSKLAAAAPHNDAAHVLATQMIAQGDSNGDKKISRQELATLADAWYDKLDTEKAGKLVQADLTARLNTAVPPPPRAQQPG
SNADVHGWPEFNTLIGGFFKFHWSDPQLITTKIDDPASPLTAMFHGQEFEIHDETYTLAEDSYSRKNVHVLTSIDYAKMS
DADKAKERNPRSDGDYALSYIRKEGKGLVFYEGHGHNEKALYTMTPMLEHLRAGIQYAIGDLKADDSPSVK
>Mature_471_residues
MHMKWMTAGAVGILALASSVANAQPPAGGRGGRGGMAPALFNALDKDKDGSVSRAELKDTFNAWFTAADTAKSGAVNEAQ
LVTALLTVFPLPAPGGFQTWGNSTPMTTPQANIDAMLAALPAIPGAKPARARKVLVFAHTGEFGFVHSSIPMAAKTVEAL
GNKGDLWSTTISYSLADINTNNLKQYDAIFLDSTTACFLDDADAAATAARRAAFLDFVRSGKGVAGIHAATDSYHWDCAE
QSKLAAAAPHNDAAHVLATQMIAQGDSNGDKKISRQELATLADAWYDKLDTEKAGKLVQADLTARLNTAVPPPPRAQQPG
SNADVHGWPEFNTLIGGFFKFHWSDPQLITTKIDDPASPLTAMFHGQEFEIHDETYTLAEDSYSRKNVHVLTSIDYAKMS
DADKAKERNPRSDGDYALSYIRKEGKGLVFYEGHGHNEKALYTMTPMLEHLRAGIQYAIGDLKADDSPSVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50453; Mature: 50453

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMKWMTAGAVGILALASSVANAQPPAGGRGGRGGMAPALFNALDKDKDGSVSRAELKDT
CCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH
FNAWFTAADTAKSGAVNEAQLVTALLTVFPLPAPGGFQTWGNSTPMTTPQANIDAMLAAL
HHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
PAIPGAKPARARKVLVFAHTGEFGFVHSSIPMAAKTVEALGNKGDLWSTTISYSLADINT
CCCCCCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCC
NNLKQYDAIFLDSTTACFLDDADAAATAARRAAFLDFVRSGKGVAGIHAATDSYHWDCAE
CCCCHHEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
QSKLAAAAPHNDAAHVLATQMIAQGDSNGDKKISRQELATLADAWYDKLDTEKAGKLVQA
CCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCEEEE
DLTARLNTAVPPPPRAQQPGSNADVHGWPEFNTLIGGFFKFHWSDPQLITTKIDDPASPL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCEEEEEECCCCCCCH
TAMFHGQEFEIHDETYTLAEDSYSRKNVHVLTSIDYAKMSDADKAKERNPRSDGDYALSY
HHHCCCCEEEECCCEEEECCCCCCCCCEEEEEECCHHHCCCHHHHHHCCCCCCHHHHHHH
IRKEGKGLVFYEGHGHNEKALYTMTPMLEHLRAGIQYAIGDLKADDSPSVK
HHHCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHMKWMTAGAVGILALASSVANAQPPAGGRGGRGGMAPALFNALDKDKDGSVSRAELKDT
CCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH
FNAWFTAADTAKSGAVNEAQLVTALLTVFPLPAPGGFQTWGNSTPMTTPQANIDAMLAAL
HHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
PAIPGAKPARARKVLVFAHTGEFGFVHSSIPMAAKTVEALGNKGDLWSTTISYSLADINT
CCCCCCCCCCCEEEEEEEECCCCCEEECCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCC
NNLKQYDAIFLDSTTACFLDDADAAATAARRAAFLDFVRSGKGVAGIHAATDSYHWDCAE
CCCCHHEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
QSKLAAAAPHNDAAHVLATQMIAQGDSNGDKKISRQELATLADAWYDKLDTEKAGKLVQA
CCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCEEEE
DLTARLNTAVPPPPRAQQPGSNADVHGWPEFNTLIGGFFKFHWSDPQLITTKIDDPASPL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCEEEEEECCCCCCCH
TAMFHGQEFEIHDETYTLAEDSYSRKNVHVLTSIDYAKMSDADKAKERNPRSDGDYALSY
HHHCCCCEEEECCCEEEECCCCCCCCCEEEEEECCHHHCCCHHHHHHCCCCCCHHHHHHH
IRKEGKGLVFYEGHGHNEKALYTMTPMLEHLRAGIQYAIGDLKADDSPSVK
HHHCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA