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The map label for this gene is 116623001

Identifier: 116623001

GI number: 116623001

Start: 4936801

End: 4937217

Strand: Reverse

Name: 116623001

Synonym: Acid_3905

Alternate gene names: NA

Gene position: 4937217-4936801 (Counterclockwise)

Preceding gene: 116623002

Following gene: 116623000

Centisome position: 49.54

GC content: 64.51

Gene sequence:

>417_bases
ATGCGCAAAAGCGACATCACGGAACTGACGCAGGCGTTTGGGCTTTTGGTGAGGCGCATGCGGGCGGCGGCGTCGTCGCA
TGAACTCTCGTTGACGGAATCCGCGGTCATGGCGCGGCTGGATAAGGGCGGGCCGGCGACAACGGCCGAGCTGGCACGTG
CGGAGGGGATGAAGCCGCAGTCGATGGGCACGACAATTGCGGCGCTGGACGAGCGGGGACTGATCGAGCGGAAAGCGCAT
CCGACGGACGGGCGCCAGGTGAATATTACGCTGACCGCCAAAGGCGCGGCGGTGCGGAAGAGCGCCAGGGATGCGAAACA
CACCTGGCTGGCACAGGCCATCGCGCAGCTCGACAAAGAGGAACAGGAGACGCTGTTCGCGGCCGGCGAGATCATCAAAA
GGCTGGCGGAATTGTGA

Upstream 100 bases:

>100_bases
GACAGCCAGGATTGGGCGTCCCACTGACAAGTAAGCTTGACAGGCTAACTTAACAGGTAAACTTGCAAGGTTACCTGTTG
TTATGGTTTAATGGAATTGC

Downstream 100 bases:

>100_bases
ATCGAGCTCTGCGACACCGGAACTTTCAGCTTTTCTTTGCCGGGCAGAGCATCTCGGTGATCGGGACCTGGATGACGCGC
GTGGCAACGAGCTGGCTGGT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRKSDITELTQAFGLLVRRMRAAASSHELSLTESAVMARLDKGGPATTAELARAEGMKPQSMGTTIAALDERGLIERKAH
PTDGRQVNITLTAKGAAVRKSARDAKHTWLAQAIAQLDKEEQETLFAAGEIIKRLAEL

Sequences:

>Translated_138_residues
MRKSDITELTQAFGLLVRRMRAAASSHELSLTESAVMARLDKGGPATTAELARAEGMKPQSMGTTIAALDERGLIERKAH
PTDGRQVNITLTAKGAAVRKSARDAKHTWLAQAIAQLDKEEQETLFAAGEIIKRLAEL
>Mature_138_residues
MRKSDITELTQAFGLLVRRMRAAASSHELSLTESAVMARLDKGGPATTAELARAEGMKPQSMGTTIAALDERGLIERKAH
PTDGRQVNITLTAKGAAVRKSARDAKHTWLAQAIAQLDKEEQETLFAAGEIIKRLAEL

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 14936; Mature: 14936

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSDITELTQAFGLLVRRMRAAASSHELSLTESAVMARLDKGGPATTAELARAEGMKPQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCH
SMGTTIAALDERGLIERKAHPTDGRQVNITLTAKGAAVRKSARDAKHTWLAQAIAQLDKE
HHCCHHHHHCCCCCHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHH
EQETLFAAGEIIKRLAEL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKSDITELTQAFGLLVRRMRAAASSHELSLTESAVMARLDKGGPATTAELARAEGMKPQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCH
SMGTTIAALDERGLIERKAHPTDGRQVNITLTAKGAAVRKSARDAKHTWLAQAIAQLDKE
HHCCHHHHHCCCCCHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHH
EQETLFAAGEIIKRLAEL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]