Click here to switch to the map view.

The map label for this gene is 116622973

Identifier: 116622973

GI number: 116622973

Start: 4910685

End: 4911077

Strand: Reverse

Name: 116622973

Synonym: Acid_3876

Alternate gene names: NA

Gene position: 4911077-4910685 (Counterclockwise)

Preceding gene: 116622975

Following gene: 116622972

Centisome position: 49.28

GC content: 57.51

Gene sequence:

>393_bases
ATGACCCGACGCCTACTTGGACTCTTTGTCCTCCTCGCGGGATTTGCCTTTGCGCAGAACCGCGTCTATGAACTTCGCAC
CTACACCTGTAACGAAGGCAAACTGGAGACGCTCAAAGCGCGCTTCCGCGACCATACGATCGAGATCTTCAAGCGCCATG
GCATGGAGAGCGTGGGGTATTGGGTTCCACAGGACGGGGAGCGGTCGAAGACGACCCTGATCTACATCATCTCGCACGCA
AGCCGCGAGGCTGCCAAAGCCAACTGGGCGGCGTTCAGCGCCGATCCCGAGTGGAAAAAAGTCGCAGCGGCATCCGAAGT
CAACGGTAAGATCCTGGCGAAACCGCCGGAATCGGTATTCCTGGAGCCGACTGATTTCTCGCAGCTGAAATAA

Upstream 100 bases:

>100_bases
ACCTATGTCTTCGGAACGTACCCATCAGAGCCGCGACCGCTAGGGAGCGATCTCCGATCATCGTTAGGGCGCGATCTCCG
ATCTTGGATACACTAGCCTC

Downstream 100 bases:

>100_bases
CGGTTCAAATAACGTGGACGTCGCGCGCCAGGCGCACATGCGCCATCTTTTCGAACAACTGGAGAAGCTTGCATCGCGCC
TCCGCGAGGGCGGGGGTGCG

Product: NIPSNAP family protein

Products: NA

Alternate protein names: NIPSNAP Family Protein; Nipsnap Family Containing Protein; Nipsnap; NIPSNAP Family

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTRRLLGLFVLLAGFAFAQNRVYELRTYTCNEGKLETLKARFRDHTIEIFKRHGMESVGYWVPQDGERSKTTLIYIISHA
SREAAKANWAAFSADPEWKKVAAASEVNGKILAKPPESVFLEPTDFSQLK

Sequences:

>Translated_130_residues
MTRRLLGLFVLLAGFAFAQNRVYELRTYTCNEGKLETLKARFRDHTIEIFKRHGMESVGYWVPQDGERSKTTLIYIISHA
SREAAKANWAAFSADPEWKKVAAASEVNGKILAKPPESVFLEPTDFSQLK
>Mature_129_residues
TRRLLGLFVLLAGFAFAQNRVYELRTYTCNEGKLETLKARFRDHTIEIFKRHGMESVGYWVPQDGERSKTTLIYIISHAS
REAAKANWAAFSADPEWKKVAAASEVNGKILAKPPESVFLEPTDFSQLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14780; Mature: 14649

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRLLGLFVLLAGFAFAQNRVYELRTYTCNEGKLETLKARFRDHTIEIFKRHGMESVGY
CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
WVPQDGERSKTTLIYIISHASREAAKANWAAFSADPEWKKVAAASEVNGKILAKPPESVF
ECCCCCCCCCEEEEEEEECCCCHHHHCCCEEECCCCCHHHHHHHCCCCCEEEECCCCCEE
LEPTDFSQLK
ECCCCCCCCC
>Mature Secondary Structure 
TRRLLGLFVLLAGFAFAQNRVYELRTYTCNEGKLETLKARFRDHTIEIFKRHGMESVGY
CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
WVPQDGERSKTTLIYIISHASREAAKANWAAFSADPEWKKVAAASEVNGKILAKPPESVF
ECCCCCCCCCEEEEEEEECCCCHHHHCCCEEECCCCCHHHHHHHCCCCCEEEECCCCCEE
LEPTDFSQLK
ECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA