| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is sglT [H]
Identifier: 116622941
GI number: 116622941
Start: 4878171
End: 4879850
Strand: Direct
Name: sglT [H]
Synonym: Acid_3843
Alternate gene names: 116622941
Gene position: 4878171-4879850 (Clockwise)
Preceding gene: 116622940
Following gene: 116622942
Centisome position: 48.95
GC content: 61.13
Gene sequence:
>1680_bases TTGAAACTCGCAGCGGTTGATTACGCAATTCTCGCTCTCTACTTCGCGTTCGTCCTCGGCATAGGCTGGCGCCTTCGCAA GAAGATCTCCACCTCGGGCGACTTCCTCACCTCAGGCCACTCGGTCCCCGTCTGGATCACCAGCCTTGCCTTCCTTGCGG CCAACCTTGGCGCACAGGAGCTGGTTGGCATGTCCGGGAACGGGGCCAAGTACGGCATTATGACCGCTCACTTCTACTGG GTGGGGGCAGTGCCGGCCATGATCTTCGTCGGCATATTCATGATGCCCTTCTACTACGGAAGTCGTGCCCGCTCGGTCCC CGAGTACCTCAAACTCCGCTTCGACGAAAAGACCCGCGCGCTCAACGCTCTCACCTTCGCCGGGATGACGATCTTCTCCT CCGGCATTTCGATGTACGCCCTGGGGCTTCTGCTCCGCCTGGTGCTCGGCTGGGACTTCACAACCAGCGTCCTCTGCTCC GCCGCCATCGTGCTGGCCTATACCTTCCTGGGCGGGCTCACCAGCGCCATCTATAACGAAGTGCTGCAATTCTTCCTGAT CGTGATGGGCTTCTCTCCCCTCGCCATCATGGCCGTGATGAAGGCCGGAGGGTGGAGCGGGATGTCCGCCCGGCTCGCCC AAATGACCCTGCCCGGCGGCATCAACGGCAGCGTCATGACGCACAGTTGGAAGTACATGGCCCACACCAGCGAGAACCCG ATGGGGATCGAAATCTTCGGCCTCGTCGCCGGACTCGGTTTCGTCATGTCCTTCGGTTACTGGTGTACGGATTTCCTGGT GATCCAGCGAGCCATGGCCGCCAACTCCATGTCGGCTTCGCGCCGCACCCCGGTAATCGCCGCGCTGCCGAAAATGATGA TGCCCTTCATCGTGATCGTCCCCGGCATCGCAGCCCTGGCTCTCTCCCAAATGGGCGTGGGCTATGATCTCCCGATGAAG AATGGCGGCCCCGATTACGATCAGGTGCTCACCACCCTGATGGGCAAGTTCTATCCGGCCGGGATGCTCGGGGTCGGGCT CACCGGACTCATGGCATCCTTCATGAGCGGAATGGCCGGCAATGTCACCGCCTTCAATACCGTCTTCACCTACGATCTCT ACCAGACCTACATCAAACCCGGCCAGCCCGACCACCACTACCTCACGGTGGGGCGCATCACCACCGTGGTGGGCGTGGCG CTTTCCATCTGCACCGCCTATCTGGCGCAGCAGTACAACAGCATCAACGATCTGCTCCAGCTGGTCTTCAGCTTCGTCAA TGCGCCCCTCTTCGGCACCTTTCTGCTCGGCATGTTCTGGAAGCGCACTACCGGACACGGCGCCTTCTTCGGCCTGCTGA GCGGCACCGCCGCCGCGGCCCTGACGCAAGGCTTGACGGTGGCCGAAGGTAAGGGCGGCTGGATGGCCAACCTCCACGAG TTCCCCTCCTCCATGGCACAGAACTTCTGGATCGCGATTACCGCCTGGACCGTCTGTTTCGCCATCACTATCGCCGTCAG TATGGTCACCACCCCGCGTCCGGAAAAGGAGTTGCACGGCCTGGTATATGGCCTCACTGAGCTCAAGCACGACGAGGGAG TAAGCTGGTATCTGCGTCCCGTGCCCCTGGCGATTGCCATTGGCGCCCTGGCTTTGTTTCTGAATTTCTGGTTCGCCTGA
Upstream 100 bases:
>100_bases GCCTTCCTGAACTCCCTGTAGCGTAACGGGGACTTCCCTCTGCCTTGTGATAGACTCATGTTTCCATTTTTTGAATCTGT AACATCCCAGAGGTTCGCTT
Downstream 100 bases:
>100_bases CATGCTGGATCTACGAGTGCCTACGGGCTTCTTCTTCACCCTGATCGGCCTGATACTGGTCGCGATGGGCGTGTTCTCGC CGTCCGAACGGGCGGCGCTG
Product: SSS family solute/sodium (Na+) symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MKLAAVDYAILALYFAFVLGIGWRLRKKISTSGDFLTSGHSVPVWITSLAFLAANLGAQELVGMSGNGAKYGIMTAHFYW VGAVPAMIFVGIFMMPFYYGSRARSVPEYLKLRFDEKTRALNALTFAGMTIFSSGISMYALGLLLRLVLGWDFTTSVLCS AAIVLAYTFLGGLTSAIYNEVLQFFLIVMGFSPLAIMAVMKAGGWSGMSARLAQMTLPGGINGSVMTHSWKYMAHTSENP MGIEIFGLVAGLGFVMSFGYWCTDFLVIQRAMAANSMSASRRTPVIAALPKMMMPFIVIVPGIAALALSQMGVGYDLPMK NGGPDYDQVLTTLMGKFYPAGMLGVGLTGLMASFMSGMAGNVTAFNTVFTYDLYQTYIKPGQPDHHYLTVGRITTVVGVA LSICTAYLAQQYNSINDLLQLVFSFVNAPLFGTFLLGMFWKRTTGHGAFFGLLSGTAAAALTQGLTVAEGKGGWMANLHE FPSSMAQNFWIAITAWTVCFAITIAVSMVTTPRPEKELHGLVYGLTELKHDEGVSWYLRPVPLAIAIGALALFLNFWFA
Sequences:
>Translated_559_residues MKLAAVDYAILALYFAFVLGIGWRLRKKISTSGDFLTSGHSVPVWITSLAFLAANLGAQELVGMSGNGAKYGIMTAHFYW VGAVPAMIFVGIFMMPFYYGSRARSVPEYLKLRFDEKTRALNALTFAGMTIFSSGISMYALGLLLRLVLGWDFTTSVLCS AAIVLAYTFLGGLTSAIYNEVLQFFLIVMGFSPLAIMAVMKAGGWSGMSARLAQMTLPGGINGSVMTHSWKYMAHTSENP MGIEIFGLVAGLGFVMSFGYWCTDFLVIQRAMAANSMSASRRTPVIAALPKMMMPFIVIVPGIAALALSQMGVGYDLPMK NGGPDYDQVLTTLMGKFYPAGMLGVGLTGLMASFMSGMAGNVTAFNTVFTYDLYQTYIKPGQPDHHYLTVGRITTVVGVA LSICTAYLAQQYNSINDLLQLVFSFVNAPLFGTFLLGMFWKRTTGHGAFFGLLSGTAAAALTQGLTVAEGKGGWMANLHE FPSSMAQNFWIAITAWTVCFAITIAVSMVTTPRPEKELHGLVYGLTELKHDEGVSWYLRPVPLAIAIGALALFLNFWFA >Mature_559_residues MKLAAVDYAILALYFAFVLGIGWRLRKKISTSGDFLTSGHSVPVWITSLAFLAANLGAQELVGMSGNGAKYGIMTAHFYW VGAVPAMIFVGIFMMPFYYGSRARSVPEYLKLRFDEKTRALNALTFAGMTIFSSGISMYALGLLLRLVLGWDFTTSVLCS AAIVLAYTFLGGLTSAIYNEVLQFFLIVMGFSPLAIMAVMKAGGWSGMSARLAQMTLPGGINGSVMTHSWKYMAHTSENP MGIEIFGLVAGLGFVMSFGYWCTDFLVIQRAMAANSMSASRRTPVIAALPKMMMPFIVIVPGIAALALSQMGVGYDLPMK NGGPDYDQVLTTLMGKFYPAGMLGVGLTGLMASFMSGMAGNVTAFNTVFTYDLYQTYIKPGQPDHHYLTVGRITTVVGVA LSICTAYLAQQYNSINDLLQLVFSFVNAPLFGTFLLGMFWKRTTGHGAFFGLLSGTAAAALTQGLTVAEGKGGWMANLHE FPSSMAQNFWIAITAWTVCFAITIAVSMVTTPRPEKELHGLVYGLTELKHDEGVSWYLRPVPLAIAIGALALFLNFWFA
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI14140236, Length=559, Percent_Identity=26.4758497316637, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI4507031, Length=550, Percent_Identity=25.2727272727273, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI4507033, Length=554, Percent_Identity=25.9927797833935, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI109659836, Length=482, Percent_Identity=26.7634854771784, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI110835708, Length=557, Percent_Identity=25.4937163375224, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI17941285, Length=459, Percent_Identity=27.0152505446623, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI109659839, Length=498, Percent_Identity=25.9036144578313, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI206597483, Length=537, Percent_Identity=26.2569832402235, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI206597487, Length=469, Percent_Identity=26.226012793177, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI256985183, Length=444, Percent_Identity=26.1261261261261, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI167466278, Length=480, Percent_Identity=23.3333333333333, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI157671931, Length=284, Percent_Identity=25, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI4507035, Length=447, Percent_Identity=23.2662192393736, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1790113, Length=436, Percent_Identity=22.9357798165138, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1787251, Length=451, Percent_Identity=21.2860310421286, Blast_Score=70, Evalue=5e-13, Organism=Drosophila melanogaster, GI28573698, Length=459, Percent_Identity=23.3115468409586, Blast_Score=90, Evalue=5e-18, Organism=Drosophila melanogaster, GI24641117, Length=467, Percent_Identity=25.2676659528908, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24651739, Length=501, Percent_Identity=20.1596806387226, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI281362918, Length=503, Percent_Identity=22.0675944333996, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24645928, Length=468, Percent_Identity=22.4358974358974, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI24651741, Length=480, Percent_Identity=21.875, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI281362054, Length=462, Percent_Identity=23.1601731601732, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362052, Length=462, Percent_Identity=23.1601731601732, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362050, Length=462, Percent_Identity=23.1601731601732, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24648056, Length=462, Percent_Identity=23.1601731601732, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI21356827, Length=462, Percent_Identity=23.1601731601732, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 60514; Mature: 60514
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAAVDYAILALYFAFVLGIGWRLRKKISTSGDFLTSGHSVPVWITSLAFLAANLGAQE CCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCHHH LVGMSGNGAKYGIMTAHFYWVGAVPAMIFVGIFMMPFYYGSRARSVPEYLKLRFDEKTRA HCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHCCHHHHH LNALTFAGMTIFSSGISMYALGLLLRLVLGWDFTTSVLCSAAIVLAYTFLGGLTSAIYNE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLQFFLIVMGFSPLAIMAVMKAGGWSGMSARLAQMTLPGGINGSVMTHSWKYMAHTSENP HHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHEECCCCCCCCEEECCEEEEEECCCCC MGIEIFGLVAGLGFVMSFGYWCTDFLVIQRAMAANSMSASRRTPVIAALPKMMMPFIVIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH PGIAALALSQMGVGYDLPMKNGGPDYDQVLTTLMGKFYPAGMLGVGLTGLMASFMSGMAG HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC NVTAFNTVFTYDLYQTYIKPGQPDHHYLTVGRITTVVGVALSICTAYLAQQYNSINDLLQ CCEEHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LVFSFVNAPLFGTFLLGMFWKRTTGHGAFFGLLSGTAAAALTQGLTVAEGKGGWMANLHE HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHH FPSSMAQNFWIAITAWTVCFAITIAVSMVTTPRPEKELHGLVYGLTELKHDEGVSWYLRP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECH VPLAIAIGALALFLNFWFA HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLAAVDYAILALYFAFVLGIGWRLRKKISTSGDFLTSGHSVPVWITSLAFLAANLGAQE CCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCHHH LVGMSGNGAKYGIMTAHFYWVGAVPAMIFVGIFMMPFYYGSRARSVPEYLKLRFDEKTRA HCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHCCHHHHH LNALTFAGMTIFSSGISMYALGLLLRLVLGWDFTTSVLCSAAIVLAYTFLGGLTSAIYNE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLQFFLIVMGFSPLAIMAVMKAGGWSGMSARLAQMTLPGGINGSVMTHSWKYMAHTSENP HHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHEECCCCCCCCEEECCEEEEEECCCCC MGIEIFGLVAGLGFVMSFGYWCTDFLVIQRAMAANSMSASRRTPVIAALPKMMMPFIVIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH PGIAALALSQMGVGYDLPMKNGGPDYDQVLTTLMGKFYPAGMLGVGLTGLMASFMSGMAG HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC NVTAFNTVFTYDLYQTYIKPGQPDHHYLTVGRITTVVGVALSICTAYLAQQYNSINDLLQ CCEEHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LVFSFVNAPLFGTFLLGMFWKRTTGHGAFFGLLSGTAAAALTQGLTVAEGKGGWMANLHE HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHH FPSSMAQNFWIAITAWTVCFAITIAVSMVTTPRPEKELHGLVYGLTELKHDEGVSWYLRP HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECH VPLAIAIGALALFLNFWFA HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]