Click here to switch to the map view.

The map label for this gene is 116622924

Identifier: 116622924

GI number: 116622924

Start: 4858356

End: 4859921

Strand: Reverse

Name: 116622924

Synonym: Acid_3826

Alternate gene names: NA

Gene position: 4859921-4858356 (Counterclockwise)

Preceding gene: 116622925

Following gene: 116622923

Centisome position: 48.77

GC content: 65.64

Gene sequence:

>1566_bases
GTGCTGACGGCGATCGGCGTGGCGCGGATCGCATCGACGTATCATGCGGTGGCGCAGACCTCCGACGAGACCCCGAACAT
CGCCTGCGGGATGCAGTACCTGGACCTGGGGCGCTACGACTACGGCGCGTTCCATCCGCCGCTGGCGCGGCTCGCGATGG
CGCTGGGTCCGTACCTCTACGGGGCGCGGTCGCAAAAACTGCCTGATCGCTGGCACGAGGGCAACGCGGTGCTCTACAGC
GCGCCAAGGTATTCGCGGACCTTGACGCTGGCGCGGATCGGCATCCTGCCGTTCTTCGTGCTGGCGTGCAGCGTCGTCTG
GCTGTGGGGGCGGCGAATCCTCGGCGAGTGGGGCGCGCTCGCGCCGGTCTTCGTGTTCACCAACCTGCCGCCGGTGCTAG
CGCATGCGGGCGTGGCGACGATGGATATGGCGATCGGCGCCGGGATGGTGACGGCGCTGTTTGCGTACACGCTGTGGCTG
GAAGAGGGGACGGCGCGGCGCAGCGTGTTTCTCGGAGTCGGACTCGCGCTGGCGCTGCTTTCGAAATTCTCCTCGGTTCT
GCTGCTGCCGGTTGGTGTGTTGACGATCACGCTGGTGAACGGGTGGCCGCGCGGCCGGAAGAGGAATTGGGCGTGGGTGG
CGGTAGCGTTCGTGCTGATCTGGGGCGCGTACCGGTTTTCGTTCGGACCGATGACGGAGCACGTGGCGCGCGATGCGGCG
GAGCAGGGCGGAGTGTTCGCGAAAATCCCGGCGCCCGTGCTGCACCTGGTGGAGAGCGTCCCGGTGCCGGCGCCGCAGAT
TCTCGACGGGCTCTGGCAGGTACACAATCACGTGGACGCTGGACATACGGCGTTTCTGCTGGGGCAACACAGTTTTCACG
GCTGGTGGTATTTCTTCCCGGTAGCGCTGGCGGTGAAGACGCCGATCGCAGCGCTCTTGCTGGCGCTGGCCGGGATCATC
GCGGTTTTCGGAGAGAAGCGCCGCACGGTGTGGACGCCGGTGGCGCTGATGGCGGCGATCCTGCTGGTGAATTTGCCGAC
GAGCTTGAATATCGGCGTGCGCTACATGATGCCGCTGTTCCCGATGCTGGCGTTGACGGCGGGGATCGGCGCGGTGTGGG
TGTGGCGGCGGCAGCGACTGGCGGCCGCAGCGCTGCTCGCGTGGCTGGCGGTGGCGAGCGCGGCGGCGCATCCGGATTAC
CTGGCGTACTTTAACGAATTCGCGGGCGCGCATCCAGAGAAGATTCTGGTGGATTCGGACCTCGACTGGGGCCAGGACAT
GAACCGGCTCGTCGCTGAGTTGCGTCGTCGAGGCGTCGGGTACTTGCATATGGCGTGCCTCTATACCGGCGACGATGCGC
GCATCGGGCTGCCGAACTGGGACAGTCTGGAGCCGTATCAGCCGGTCACGGGATGGGTGGCGGTCAGTCAGACCATGGTG
CAGAATTATGGCTGGATGGCGGCGCAGCAGAAAGGCCGGCAGGATTTGGCATTCGCGTGGCTGGACAAATATCAGCCGGT
GGCGAAGGTGGGGAAATCGATCTTGCTGTACCATATTCCAGAGTGA

Upstream 100 bases:

>100_bases
TTGAGAAGTTTCTTCGCGAGTCGTTAGGCGAGGTGCGGATCATCGAAGCATTTCCCTGGATCATCGCTTGCTGCCGTCCA
AACCAACACTGATCTTCCTC

Downstream 100 bases:

>100_bases
CCGCCTTCATCGCGTACACTGAATAATCCGCTGTGAAGACCACCTATACGGCCGTTGATGCCGCATACCTCGGGGAACGA
AAGCTGCGACGGCACGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: 4-Amino-4-Deoxy-L-Arabinose Transferase

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MLTAIGVARIASTYHAVAQTSDETPNIACGMQYLDLGRYDYGAFHPPLARLAMALGPYLYGARSQKLPDRWHEGNAVLYS
APRYSRTLTLARIGILPFFVLACSVVWLWGRRILGEWGALAPVFVFTNLPPVLAHAGVATMDMAIGAGMVTALFAYTLWL
EEGTARRSVFLGVGLALALLSKFSSVLLLPVGVLTITLVNGWPRGRKRNWAWVAVAFVLIWGAYRFSFGPMTEHVARDAA
EQGGVFAKIPAPVLHLVESVPVPAPQILDGLWQVHNHVDAGHTAFLLGQHSFHGWWYFFPVALAVKTPIAALLLALAGII
AVFGEKRRTVWTPVALMAAILLVNLPTSLNIGVRYMMPLFPMLALTAGIGAVWVWRRQRLAAAALLAWLAVASAAAHPDY
LAYFNEFAGAHPEKILVDSDLDWGQDMNRLVAELRRRGVGYLHMACLYTGDDARIGLPNWDSLEPYQPVTGWVAVSQTMV
QNYGWMAAQQKGRQDLAFAWLDKYQPVAKVGKSILLYHIPE

Sequences:

>Translated_521_residues
MLTAIGVARIASTYHAVAQTSDETPNIACGMQYLDLGRYDYGAFHPPLARLAMALGPYLYGARSQKLPDRWHEGNAVLYS
APRYSRTLTLARIGILPFFVLACSVVWLWGRRILGEWGALAPVFVFTNLPPVLAHAGVATMDMAIGAGMVTALFAYTLWL
EEGTARRSVFLGVGLALALLSKFSSVLLLPVGVLTITLVNGWPRGRKRNWAWVAVAFVLIWGAYRFSFGPMTEHVARDAA
EQGGVFAKIPAPVLHLVESVPVPAPQILDGLWQVHNHVDAGHTAFLLGQHSFHGWWYFFPVALAVKTPIAALLLALAGII
AVFGEKRRTVWTPVALMAAILLVNLPTSLNIGVRYMMPLFPMLALTAGIGAVWVWRRQRLAAAALLAWLAVASAAAHPDY
LAYFNEFAGAHPEKILVDSDLDWGQDMNRLVAELRRRGVGYLHMACLYTGDDARIGLPNWDSLEPYQPVTGWVAVSQTMV
QNYGWMAAQQKGRQDLAFAWLDKYQPVAKVGKSILLYHIPE
>Mature_521_residues
MLTAIGVARIASTYHAVAQTSDETPNIACGMQYLDLGRYDYGAFHPPLARLAMALGPYLYGARSQKLPDRWHEGNAVLYS
APRYSRTLTLARIGILPFFVLACSVVWLWGRRILGEWGALAPVFVFTNLPPVLAHAGVATMDMAIGAGMVTALFAYTLWL
EEGTARRSVFLGVGLALALLSKFSSVLLLPVGVLTITLVNGWPRGRKRNWAWVAVAFVLIWGAYRFSFGPMTEHVARDAA
EQGGVFAKIPAPVLHLVESVPVPAPQILDGLWQVHNHVDAGHTAFLLGQHSFHGWWYFFPVALAVKTPIAALLLALAGII
AVFGEKRRTVWTPVALMAAILLVNLPTSLNIGVRYMMPLFPMLALTAGIGAVWVWRRQRLAAAALLAWLAVASAAAHPDY
LAYFNEFAGAHPEKILVDSDLDWGQDMNRLVAELRRRGVGYLHMACLYTGDDARIGLPNWDSLEPYQPVTGWVAVSQTMV
QNYGWMAAQQKGRQDLAFAWLDKYQPVAKVGKSILLYHIPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57290; Mature: 57290

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTAIGVARIASTYHAVAQTSDETPNIACGMQYLDLGRYDYGAFHPPLARLAMALGPYLY
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
GARSQKLPDRWHEGNAVLYSAPRYSRTLTLARIGILPFFVLACSVVWLWGRRILGEWGAL
CCCCCCCCCHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
APVFVFTNLPPVLAHAGVATMDMAIGAGMVTALFAYTLWLEEGTARRSVFLGVGLALALL
HHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SKFSSVLLLPVGVLTITLVNGWPRGRKRNWAWVAVAFVLIWGAYRFSFGPMTEHVARDAA
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EQGGVFAKIPAPVLHLVESVPVPAPQILDGLWQVHNHVDAGHTAFLLGQHSFHGWWYFFP
HHCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH
VALAVKTPIAALLLALAGIIAVFGEKRRTVWTPVALMAAILLVNLPTSLNIGVRYMMPLF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHH
PMLALTAGIGAVWVWRRQRLAAAALLAWLAVASAAAHPDYLAYFNEFAGAHPEKILVDSD
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECC
LDWGQDMNRLVAELRRRGVGYLHMACLYTGDDARIGLPNWDSLEPYQPVTGWVAVSQTMV
CCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHH
QNYGWMAAQQKGRQDLAFAWLDKYQPVAKVGKSILLYHIPE
HHCCCHHHHHCCCHHHHHHHHHHCCHHHHHCCEEEEEECCC
>Mature Secondary Structure
MLTAIGVARIASTYHAVAQTSDETPNIACGMQYLDLGRYDYGAFHPPLARLAMALGPYLY
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
GARSQKLPDRWHEGNAVLYSAPRYSRTLTLARIGILPFFVLACSVVWLWGRRILGEWGAL
CCCCCCCCCHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
APVFVFTNLPPVLAHAGVATMDMAIGAGMVTALFAYTLWLEEGTARRSVFLGVGLALALL
HHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SKFSSVLLLPVGVLTITLVNGWPRGRKRNWAWVAVAFVLIWGAYRFSFGPMTEHVARDAA
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EQGGVFAKIPAPVLHLVESVPVPAPQILDGLWQVHNHVDAGHTAFLLGQHSFHGWWYFFP
HHCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH
VALAVKTPIAALLLALAGIIAVFGEKRRTVWTPVALMAAILLVNLPTSLNIGVRYMMPLF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHH
PMLALTAGIGAVWVWRRQRLAAAALLAWLAVASAAAHPDYLAYFNEFAGAHPEKILVDSD
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECC
LDWGQDMNRLVAELRRRGVGYLHMACLYTGDDARIGLPNWDSLEPYQPVTGWVAVSQTMV
CCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHH
QNYGWMAAQQKGRQDLAFAWLDKYQPVAKVGKSILLYHIPE
HHCCCHHHHHCCCHHHHHHHHHHCCHHHHHCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA