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The map label for this gene is yidJ [H]

Identifier: 116622919

GI number: 116622919

Start: 4852470

End: 4854122

Strand: Direct

Name: yidJ [H]

Synonym: Acid_3820

Alternate gene names: 116622919

Gene position: 4852470-4854122 (Clockwise)

Preceding gene: 116622918

Following gene: 116622927

Centisome position: 48.69

GC content: 66.06

Gene sequence:

>1653_bases
ATGCGCGTCTGTCTGCTTCTTGTTCTTGCCGCCGCCGCGCTGGCGCAGCCGGCGCCGGTGATCGTGGTCTCGGTGGATAC
GCTGCGCGCCGACCGGCTGAGCGCCTATGGCTATCGCAAGCAGCGCACGCCCAATCTGGATTCCTTCGCCGAGCGTGCCA
CGCTTTACGAGAACGCGGCGTGCGCCACGCCTCTGACGCTGCCCTCGCACGCTTCGTTGTTCACCTCCACGTATCCTTAC
GAAAATCGCATTCAGGAAAATGCCGAGCCGGTACCGGCGGGCGCGGTCACGCTCGCCGGAGTGCTGAAGCAGCACGGCTA
TCGAACCGCAGCCTTCATCGCCTCCGTGTTCCTGGAACGCCGTATGGGTTTGGACCAGGGCTTCGACGAATACGATAGCC
CGTTCGATTTCCGCGTGCTCTCGCCCATGTCGGGCGAAATGTTCTATGCCGGCGAGTCGCGCAATCCCTACGCGGTTCGC
GACCGGCGCGACGGCTCGATCGTGATGGCGAGCGCGATCCGCTGGCTTGCCGCGCACAAGGGCGAGCCAGTCTTCCTGTT
CGTGCACCTTTACGACATGCACCTGCCCTACCAGCACGGCACGGATTACGACGCGCAGCTTGGGTACGTGGATCAGACCC
TCGGCACGTTCAAGCAAGCGCTGGTGCGCGGCGGATGGTGGGACCGCTCGATGGTGGTGCTGCTCAGCGATCACGGCGAA
AGTCTTGGCGATCACGGCGAGGCCAACCACGGCTACTTCATTTACCAGAGCACCATGGCCGTTCCACTGATGATCCATTG
GCCCGCCGGCGCCCCCGGCACACCTGCGCGCGAGCCGCACCCGGTTGGCCTGATCGATGTGGCGCCGACGATTCTCGACG
CCCTCCACATTCCCGCGCCGCCCAGCTTTCACGGCCAGAGCCTGATGGCCGCTCACAAACCGCCGTGGGTCTTCGGCGAG
AGCGTTCACGCCTACGACGCGTTCGGCTGGTCCCCCTTGCGCAGCCTGCGCATCGGCGACTACAAATTCATCGAGGCACC
GCGCCCCGAGTTGTACAACCTGGCGGCCGACCCCGGCGAGCTTCACAATCTCGCCGCCGCCGATGGCGCGCGCGTGCAAT
CGATGCGCGGCGAACTGGCGAAGGTGATGTCGCGGCTGCGCCCGAAGGGTCCCGCGCCGGCGACGAATCTTTCCGCGCGC
GATCGCGCCCTGCTCGGCTCGCTCGGCTACATCGCTCCCGGTCCGCAGACCGCGGCCTCCGGTTCGCGGCCAGACCCGAA
GGATCGCATGGCCGAGTTCCGCCTCTACGAAGATGCGCAGGTGCTGCTCTACCGACGCCGCCTGCCGGAGGCCATCGCCG
CGCTCCGCAAACTGGTGACGCAGCATCCGCGCAACACGCTGGCCCGCCGCGATCTCGGCGGTGCGTATCTTGAACAGAAG
CAGTACGCCAGGGCGCGCGAGGAACTCGCCCAAGTCCTGCTCGCCGCGCCCAACGATTACGTCACGCTCTACCAGCTTGG
GCTAGCGTGCGAGCACTCCGGTCTTTTGAAGCAGGCTTTGGGGCACCTCGAGGCGGCTTGCGGGGTCGCACCGGACTCGG
TGCCTTGCAAGGCGGAGTTGGACGCCGTGCGGAAGAGAGTGAAGCCTAACTAA

Upstream 100 bases:

>100_bases
GGTCGCAGTGACGGTTCCGGTCGGAGTCACGGGTAACGTCGCGCTTGTAATCATTGGCGGCGCGGCTACGTCGAATTCTG
TGACGATCCCGGTGCAATAG

Downstream 100 bases:

>100_bases
CTCGCGGACCAAGAAACGCTGGTATATCGCGCGAGCCTTGGGTCACAGCGACAATTTCGATCGGTTTCCTCTACGCCCGG
TATATTACGAGATACGCACC

Product: sulfatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MRVCLLLVLAAAALAQPAPVIVVSVDTLRADRLSAYGYRKQRTPNLDSFAERATLYENAACATPLTLPSHASLFTSTYPY
ENRIQENAEPVPAGAVTLAGVLKQHGYRTAAFIASVFLERRMGLDQGFDEYDSPFDFRVLSPMSGEMFYAGESRNPYAVR
DRRDGSIVMASAIRWLAAHKGEPVFLFVHLYDMHLPYQHGTDYDAQLGYVDQTLGTFKQALVRGGWWDRSMVVLLSDHGE
SLGDHGEANHGYFIYQSTMAVPLMIHWPAGAPGTPAREPHPVGLIDVAPTILDALHIPAPPSFHGQSLMAAHKPPWVFGE
SVHAYDAFGWSPLRSLRIGDYKFIEAPRPELYNLAADPGELHNLAAADGARVQSMRGELAKVMSRLRPKGPAPATNLSAR
DRALLGSLGYIAPGPQTAASGSRPDPKDRMAEFRLYEDAQVLLYRRRLPEAIAALRKLVTQHPRNTLARRDLGGAYLEQK
QYARAREELAQVLLAAPNDYVTLYQLGLACEHSGLLKQALGHLEAACGVAPDSVPCKAELDAVRKRVKPN

Sequences:

>Translated_550_residues
MRVCLLLVLAAAALAQPAPVIVVSVDTLRADRLSAYGYRKQRTPNLDSFAERATLYENAACATPLTLPSHASLFTSTYPY
ENRIQENAEPVPAGAVTLAGVLKQHGYRTAAFIASVFLERRMGLDQGFDEYDSPFDFRVLSPMSGEMFYAGESRNPYAVR
DRRDGSIVMASAIRWLAAHKGEPVFLFVHLYDMHLPYQHGTDYDAQLGYVDQTLGTFKQALVRGGWWDRSMVVLLSDHGE
SLGDHGEANHGYFIYQSTMAVPLMIHWPAGAPGTPAREPHPVGLIDVAPTILDALHIPAPPSFHGQSLMAAHKPPWVFGE
SVHAYDAFGWSPLRSLRIGDYKFIEAPRPELYNLAADPGELHNLAAADGARVQSMRGELAKVMSRLRPKGPAPATNLSAR
DRALLGSLGYIAPGPQTAASGSRPDPKDRMAEFRLYEDAQVLLYRRRLPEAIAALRKLVTQHPRNTLARRDLGGAYLEQK
QYARAREELAQVLLAAPNDYVTLYQLGLACEHSGLLKQALGHLEAACGVAPDSVPCKAELDAVRKRVKPN
>Mature_550_residues
MRVCLLLVLAAAALAQPAPVIVVSVDTLRADRLSAYGYRKQRTPNLDSFAERATLYENAACATPLTLPSHASLFTSTYPY
ENRIQENAEPVPAGAVTLAGVLKQHGYRTAAFIASVFLERRMGLDQGFDEYDSPFDFRVLSPMSGEMFYAGESRNPYAVR
DRRDGSIVMASAIRWLAAHKGEPVFLFVHLYDMHLPYQHGTDYDAQLGYVDQTLGTFKQALVRGGWWDRSMVVLLSDHGE
SLGDHGEANHGYFIYQSTMAVPLMIHWPAGAPGTPAREPHPVGLIDVAPTILDALHIPAPPSFHGQSLMAAHKPPWVFGE
SVHAYDAFGWSPLRSLRIGDYKFIEAPRPELYNLAADPGELHNLAAADGARVQSMRGELAKVMSRLRPKGPAPATNLSAR
DRALLGSLGYIAPGPQTAASGSRPDPKDRMAEFRLYEDAQVLLYRRRLPEAIAALRKLVTQHPRNTLARRDLGGAYLEQK
QYARAREELAQVLLAAPNDYVTLYQLGLACEHSGLLKQALGHLEAACGVAPDSVPCKAELDAVRKRVKPN

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Escherichia coli, GI1790112, Length=198, Percent_Identity=29.7979797979798, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 60421; Mature: 60421

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVCLLLVLAAAALAQPAPVIVVSVDTLRADRLSAYGYRKQRTPNLDSFAERATLYENAA
CHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
CATPLTLPSHASLFTSTYPYENRIQENAEPVPAGAVTLAGVLKQHGYRTAAFIASVFLER
CCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RMGLDQGFDEYDSPFDFRVLSPMSGEMFYAGESRNPYAVRDRRDGSIVMASAIRWLAAHK
HHCCCCCCHHHCCCCCEEEECCCCCCEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHCC
GEPVFLFVHLYDMHLPYQHGTDYDAQLGYVDQTLGTFKQALVRGGWWDRSMVVLLSDHGE
CCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
SLGDHGEANHGYFIYQSTMAVPLMIHWPAGAPGTPAREPHPVGLIDVAPTILDALHIPAP
CCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PSFHGQSLMAAHKPPWVFGESVHAYDAFGWSPLRSLRIGDYKFIEAPRPELYNLAADPGE
CCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCHHHHCCCCCEEEECCCCCHHHCCCCCCHH
LHNLAAADGARVQSMRGELAKVMSRLRPKGPAPATNLSARDRALLGSLGYIAPGPQTAAS
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
GSRPDPKDRMAEFRLYEDAQVLLYRRRLPEAIAALRKLVTQHPRNTLARRDLGGAYLEQK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH
QYARAREELAQVLLAAPNDYVTLYQLGLACEHSGLLKQALGHLEAACGVAPDSVPCKAEL
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
DAVRKRVKPN
HHHHHHCCCC
>Mature Secondary Structure
MRVCLLLVLAAAALAQPAPVIVVSVDTLRADRLSAYGYRKQRTPNLDSFAERATLYENAA
CHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
CATPLTLPSHASLFTSTYPYENRIQENAEPVPAGAVTLAGVLKQHGYRTAAFIASVFLER
CCCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RMGLDQGFDEYDSPFDFRVLSPMSGEMFYAGESRNPYAVRDRRDGSIVMASAIRWLAAHK
HHCCCCCCHHHCCCCCEEEECCCCCCEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHCC
GEPVFLFVHLYDMHLPYQHGTDYDAQLGYVDQTLGTFKQALVRGGWWDRSMVVLLSDHGE
CCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
SLGDHGEANHGYFIYQSTMAVPLMIHWPAGAPGTPAREPHPVGLIDVAPTILDALHIPAP
CCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
PSFHGQSLMAAHKPPWVFGESVHAYDAFGWSPLRSLRIGDYKFIEAPRPELYNLAADPGE
CCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCHHHHCCCCCEEEECCCCCHHHCCCCCCHH
LHNLAAADGARVQSMRGELAKVMSRLRPKGPAPATNLSARDRALLGSLGYIAPGPQTAAS
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
GSRPDPKDRMAEFRLYEDAQVLLYRRRLPEAIAALRKLVTQHPRNTLARRDLGGAYLEQK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH
QYARAREELAQVLLAAPNDYVTLYQLGLACEHSGLLKQALGHLEAACGVAPDSVPCKAEL
HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
DAVRKRVKPN
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]