| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116622897
GI number: 116622897
Start: 4821442
End: 4823877
Strand: Direct
Name: macB [H]
Synonym: Acid_3798
Alternate gene names: 116622897
Gene position: 4821442-4823877 (Clockwise)
Preceding gene: 116622892
Following gene: 116622899
Centisome position: 48.38
GC content: 65.76
Gene sequence:
>2436_bases ATGACGGGGATCCTGGAAGACTTGCGCTACGGCCTGAGGGGCTTAGCGAAAAACCGCGGCTTCGCTGTCGTAGCGGTGTT GTCACTGGCGCTCGGCATCGGCGCTAATACCACCATCTTCACGCTGCTGAACGCGGTCTTCCTGCGCCCTCTTCCCGTAC ATGACGCCTCCAGCCTGGTCGCCGTCTTCACCATTGACCTGCGCAATCCCGGACTACTGAACTGCTCGTACCCGAATTAT CGCGATTATCGCGATCAAAACACCGTCTTCTCCTCCCTGCTCCTGTATACCTCTGTGACCGTCAACCTCACCGGCCGCGG CGATCCCCAGCTCCTGATGGGACAGCTGGTCTCCGGCAATTTTTTCAATACCCTCGGCGTGAACCCGGTGCTTGGCCGCG GCTTCCGCCCTGACGAGGACGCCAGCCCAGGCGCGGCCGCCGTCGTGGTCATCAGCCACCCGCTTTGGCAGCGCCTGTTC GCCGGACGCCCCGACGTGGTCGGCCGGCCTATCGAGCTCGGCGGGCGGACCTACTCCATCGTCGGTGTCGCGCCTCCCGG CTTCGTCGGCTTGAACCAGTTGATCGGGGCAGATGTCTTTGTACCTCTTTCCATGTATCCGCAGTTGTACCCGGCTCCCG CGCAGGTCAACCAGCGGAGCGCCCTCATGTTCTCCGCAGTCGGCCGCCTCAAACCCGGAATTGGAATCGCGCAGGCCGGT GCCGCGATGCGCGGCCTCGCGCAGCAACTGGAGCGCGAACACCCGGAGAATCGCGGCCGCAGTCTGGCCCTGACCTCGAT CAGCGAAGCCGCTCTCAGCGCGCGCACCCGCCCCGTCATCTCGCGCGCCGGAGCCGTCCTGATGACGGTCTCCGCGCTTA TTCTCCTGATCGCCTGCGGCAACGTCGCCAACCTTCTGCTGGCGCGTGCCGCCGGACGCAATAAGGAAATCGCGATCCGC CTGGCGATGGGCGCCACCCGTCCCAGACTGGTCCGGCAGCTCCTCACCGAAAGCCTGCTCCTGGCATTCGTGGGTGGCGC GCTCGGACTCTTCCTGGCGCGTTGGGCCCGCGACCTGCTTTGGGGAATCCGTCCCGCGACCTTCAATCACGCCGGCTTCC ACCTGGACCTGGATCCCCGCGTCTTGCTCTTCACGCTGGGAATCTCCGTGCTGACCGGTGTGCTCTTCGGCCTGGCACCC GCCCTGCGCGCCACCAAGGCGAACCTGGCGACCGACCTCAAGGAGCGCGCCGGTGTGCAAAGCAGCTTCCGCTACACCTG GGGCCTTCGCGCAACCCTCGTGATGGCGCAGGTGGCGCTCTCCCTAATCGCGCTGATCGGCGCCGGACTCTTCGTGCGCA GCCTGCAAAACGCCGGGCAGGTCGATCCCGGCTTCGATGCTGTCCATCTCGGAATCGTGGCCTACAATGTCACCGACCAG GGCTACAACGAAGGCCGCGGCCGCGATTTCCACGAGCGCGCCGTGGCGCGCGCCGCCGCCGTACCCGGAGTGATCTCGGC CAGCCTCGCCATGGACGTTCCTTTTCACGTGGCCTTTTCGCGCAAGGTGGTGCTCGAAGGGCAGGAGAATACCGCGCAGG GACGTCCCACCTTGACCAGCGTCGTCTCGCCCGGCTACCTGCATACCGTGGCCATTCCGCTGCTTCGCGGCCGCGACTTC AGCCCGCTCGATACCAAGACCACGCCCCGCGTCGCCATCGTCAACGAGGCCGCCGCTGCCGCCTTTTGGCCGGGACGCAA CCCCATCGGCCAGCGCATTTCCTTCACCACCGACCGCTCGCCTTTCGAAGTCATCGGCGTGGCGCGCAACGCCAACTACC AGGCCATCGACGAAGCGCCGCAGGCGCTGGTCTATCTCTCGCTCGTGCAATTCTACTTCCCCACCGCGGTCCTCTATGTA CACACCGCCGGTGACCCCACCACGGTCATCGGCGCCGTCCGCAAGGAAGTTCAAACGCTCGACCGCAATCTGCTCTTGCA GGCCGAGAGCTTGCAGGTTTCGATCCGCGATCTCTTGTGGGCCCAGCGCATCTCGGCCGGCCTGCTCGCCGCCTTCGGCT TGCTCGCGCTCCTGCTCTCCAGCATCGGAATCTACGGCGTCGTCGCGTTCTCCGTCCGCCAGCGCACCCGTGAGATCGGC GTCCGCATGGCAATGGGCGCGACCCCCGCCGACGTCCAGCTGATGATCGTGCGCGAAGGTGTCCGCCTGGTCGCGATCGG CGTCCTCGCCGGCTTCGTCATCTCCTTCGCCGCAGCCGACAGCGTAGGCGGTATGCTCTTCATGAAGAACCCGCGCGACC TCTTCACCTTCGCCTTGGTCCCGGCAATGCTTACCCTGGTCGGCATCCTCGCCTGCTGGGTCCCCGCCGCCCGCGCCATC CGCATCGATCCGTCGATTGCGTTACGAGAGGAATAA
Upstream 100 bases:
>100_bases AGCGCCGCAACCATAACCACCAGCAACGTTTTCGAGGTCACGAAATGCGAGTATAACAGTCCCATACGTACCGGCATGGG TTATACTTGCTGGTTCCTGA
Downstream 100 bases:
>100_bases ATCTTTTCTCGCAGAGCCGCGGAGCCGCAGAGTCACGCCAAGAAGATAAAGCCTTAGGAGTTTTGCATTGGTTTTCTCTG CGTGACTCTGCGGCTCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 811; Mature: 810
Protein sequence:
>811_residues MTGILEDLRYGLRGLAKNRGFAVVAVLSLALGIGANTTIFTLLNAVFLRPLPVHDASSLVAVFTIDLRNPGLLNCSYPNY RDYRDQNTVFSSLLLYTSVTVNLTGRGDPQLLMGQLVSGNFFNTLGVNPVLGRGFRPDEDASPGAAAVVVISHPLWQRLF AGRPDVVGRPIELGGRTYSIVGVAPPGFVGLNQLIGADVFVPLSMYPQLYPAPAQVNQRSALMFSAVGRLKPGIGIAQAG AAMRGLAQQLEREHPENRGRSLALTSISEAALSARTRPVISRAGAVLMTVSALILLIACGNVANLLLARAAGRNKEIAIR LAMGATRPRLVRQLLTESLLLAFVGGALGLFLARWARDLLWGIRPATFNHAGFHLDLDPRVLLFTLGISVLTGVLFGLAP ALRATKANLATDLKERAGVQSSFRYTWGLRATLVMAQVALSLIALIGAGLFVRSLQNAGQVDPGFDAVHLGIVAYNVTDQ GYNEGRGRDFHERAVARAAAVPGVISASLAMDVPFHVAFSRKVVLEGQENTAQGRPTLTSVVSPGYLHTVAIPLLRGRDF SPLDTKTTPRVAIVNEAAAAAFWPGRNPIGQRISFTTDRSPFEVIGVARNANYQAIDEAPQALVYLSLVQFYFPTAVLYV HTAGDPTTVIGAVRKEVQTLDRNLLLQAESLQVSIRDLLWAQRISAGLLAAFGLLALLLSSIGIYGVVAFSVRQRTREIG VRMAMGATPADVQLMIVREGVRLVAIGVLAGFVISFAAADSVGGMLFMKNPRDLFTFALVPAMLTLVGILACWVPAARAI RIDPSIALREE
Sequences:
>Translated_811_residues MTGILEDLRYGLRGLAKNRGFAVVAVLSLALGIGANTTIFTLLNAVFLRPLPVHDASSLVAVFTIDLRNPGLLNCSYPNY RDYRDQNTVFSSLLLYTSVTVNLTGRGDPQLLMGQLVSGNFFNTLGVNPVLGRGFRPDEDASPGAAAVVVISHPLWQRLF AGRPDVVGRPIELGGRTYSIVGVAPPGFVGLNQLIGADVFVPLSMYPQLYPAPAQVNQRSALMFSAVGRLKPGIGIAQAG AAMRGLAQQLEREHPENRGRSLALTSISEAALSARTRPVISRAGAVLMTVSALILLIACGNVANLLLARAAGRNKEIAIR LAMGATRPRLVRQLLTESLLLAFVGGALGLFLARWARDLLWGIRPATFNHAGFHLDLDPRVLLFTLGISVLTGVLFGLAP ALRATKANLATDLKERAGVQSSFRYTWGLRATLVMAQVALSLIALIGAGLFVRSLQNAGQVDPGFDAVHLGIVAYNVTDQ GYNEGRGRDFHERAVARAAAVPGVISASLAMDVPFHVAFSRKVVLEGQENTAQGRPTLTSVVSPGYLHTVAIPLLRGRDF SPLDTKTTPRVAIVNEAAAAAFWPGRNPIGQRISFTTDRSPFEVIGVARNANYQAIDEAPQALVYLSLVQFYFPTAVLYV HTAGDPTTVIGAVRKEVQTLDRNLLLQAESLQVSIRDLLWAQRISAGLLAAFGLLALLLSSIGIYGVVAFSVRQRTREIG VRMAMGATPADVQLMIVREGVRLVAIGVLAGFVISFAAADSVGGMLFMKNPRDLFTFALVPAMLTLVGILACWVPAARAI RIDPSIALREE >Mature_810_residues TGILEDLRYGLRGLAKNRGFAVVAVLSLALGIGANTTIFTLLNAVFLRPLPVHDASSLVAVFTIDLRNPGLLNCSYPNYR DYRDQNTVFSSLLLYTSVTVNLTGRGDPQLLMGQLVSGNFFNTLGVNPVLGRGFRPDEDASPGAAAVVVISHPLWQRLFA GRPDVVGRPIELGGRTYSIVGVAPPGFVGLNQLIGADVFVPLSMYPQLYPAPAQVNQRSALMFSAVGRLKPGIGIAQAGA AMRGLAQQLEREHPENRGRSLALTSISEAALSARTRPVISRAGAVLMTVSALILLIACGNVANLLLARAAGRNKEIAIRL AMGATRPRLVRQLLTESLLLAFVGGALGLFLARWARDLLWGIRPATFNHAGFHLDLDPRVLLFTLGISVLTGVLFGLAPA LRATKANLATDLKERAGVQSSFRYTWGLRATLVMAQVALSLIALIGAGLFVRSLQNAGQVDPGFDAVHLGIVAYNVTDQG YNEGRGRDFHERAVARAAAVPGVISASLAMDVPFHVAFSRKVVLEGQENTAQGRPTLTSVVSPGYLHTVAIPLLRGRDFS PLDTKTTPRVAIVNEAAAAAFWPGRNPIGQRISFTTDRSPFEVIGVARNANYQAIDEAPQALVYLSLVQFYFPTAVLYVH TAGDPTTVIGAVRKEVQTLDRNLLLQAESLQVSIRDLLWAQRISAGLLAAFGLLALLLSSIGIYGVVAFSVRQRTREIGV RMAMGATPADVQLMIVREGVRLVAIGVLAGFVISFAAADSVGGMLFMKNPRDLFTFALVPAMLTLVGILACWVPAARAIR IDPSIALREE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=293, Percent_Identity=29.6928327645051, Blast_Score=89, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 86758; Mature: 86627
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGILEDLRYGLRGLAKNRGFAVVAVLSLALGIGANTTIFTLLNAVFLRPLPVHDASSLV CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEE AVFTIDLRNPGLLNCSYPNYRDYRDQNTVFSSLLLYTSVTVNLTGRGDPQLLMGQLVSGN EEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCC FFNTLGVNPVLGRGFRPDEDASPGAAAVVVISHPLWQRLFAGRPDVVGRPIELGGRTYSI CCHHCCCCHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCEECCCEEEE VGVAPPGFVGLNQLIGADVFVPLSMYPQLYPAPAQVNQRSALMFSAVGRLKPGIGIAQAG EEECCCCCHHHHHHHCCCEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH AAMRGLAQQLEREHPENRGRSLALTSISEAALSARTRPVISRAGAVLMTVSALILLIACG HHHHHHHHHHHHHCCHHCCCEEEEHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCC NVANLLLARAAGRNKEIAIRLAMGATRPRLVRQLLTESLLLAFVGGALGLFLARWARDLL CHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGIRPATFNHAGFHLDLDPRVLLFTLGISVLTGVLFGLAPALRATKANLATDLKERAGVQ HCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SSFRYTWGLRATLVMAQVALSLIALIGAGLFVRSLQNAGQVDPGFDAVHLGIVAYNVTDQ CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCC GYNEGRGRDFHERAVARAAAVPGVISASLAMDVPFHVAFSRKVVLEGQENTAQGRPTLTS CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECEEEEEECCCCCCCCCCCHHH VVSPGYLHTVAIPLLRGRDFSPLDTKTTPRVAIVNEAAAAAFWPGRNPIGQRISFTTDRS HCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCCCCCEEECCCCC PFEVIGVARNANYQAIDEAPQALVYLSLVQFYFPTAVLYVHTAGDPTTVIGAVRKEVQTL CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH DRNLLLQAESLQVSIRDLLWAQRISAGLLAAFGLLALLLSSIGIYGVVAFSVRQRTREIG HHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC VRMAMGATPADVQLMIVREGVRLVAIGVLAGFVISFAAADSVGGMLFMKNPRDLFTFALV EEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH PAMLTLVGILACWVPAARAIRIDPSIALREE HHHHHHHHHHHHHHCCCCEEEECCCEECCCC >Mature Secondary Structure TGILEDLRYGLRGLAKNRGFAVVAVLSLALGIGANTTIFTLLNAVFLRPLPVHDASSLV CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEE AVFTIDLRNPGLLNCSYPNYRDYRDQNTVFSSLLLYTSVTVNLTGRGDPQLLMGQLVSGN EEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCC FFNTLGVNPVLGRGFRPDEDASPGAAAVVVISHPLWQRLFAGRPDVVGRPIELGGRTYSI CCHHCCCCHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCEECCCEEEE VGVAPPGFVGLNQLIGADVFVPLSMYPQLYPAPAQVNQRSALMFSAVGRLKPGIGIAQAG EEECCCCCHHHHHHHCCCEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH AAMRGLAQQLEREHPENRGRSLALTSISEAALSARTRPVISRAGAVLMTVSALILLIACG HHHHHHHHHHHHHCCHHCCCEEEEHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCC NVANLLLARAAGRNKEIAIRLAMGATRPRLVRQLLTESLLLAFVGGALGLFLARWARDLL CHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGIRPATFNHAGFHLDLDPRVLLFTLGISVLTGVLFGLAPALRATKANLATDLKERAGVQ HCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SSFRYTWGLRATLVMAQVALSLIALIGAGLFVRSLQNAGQVDPGFDAVHLGIVAYNVTDQ CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCC GYNEGRGRDFHERAVARAAAVPGVISASLAMDVPFHVAFSRKVVLEGQENTAQGRPTLTS CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECEEEEEECCCCCCCCCCCHHH VVSPGYLHTVAIPLLRGRDFSPLDTKTTPRVAIVNEAAAAAFWPGRNPIGQRISFTTDRS HCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCCCCCEEECCCCC PFEVIGVARNANYQAIDEAPQALVYLSLVQFYFPTAVLYVHTAGDPTTVIGAVRKEVQTL CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHH DRNLLLQAESLQVSIRDLLWAQRISAGLLAAFGLLALLLSSIGIYGVVAFSVRQRTREIG HHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC VRMAMGATPADVQLMIVREGVRLVAIGVLAGFVISFAAADSVGGMLFMKNPRDLFTFALV EEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH PAMLTLVGILACWVPAARAIRIDPSIALREE HHHHHHHHHHHHHHCCCCEEEECCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA