| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622893
Identifier: 116622893
GI number: 116622893
Start: 4815198
End: 4817183
Strand: Reverse
Name: 116622893
Synonym: Acid_3794
Alternate gene names: NA
Gene position: 4817183-4815198 (Counterclockwise)
Preceding gene: 116622894
Following gene: 116622889
Centisome position: 48.34
GC content: 64.85
Gene sequence:
>1986_bases ATGAGGCTGATTGGCAATTCTCGGTGGCTGGCGGTGACGGGGGCGGTGCTGGCGTTCGCGGCGCTTCCGGTGCGCGCTCA GGATCAGGACGATCTGAAGCGCGGCGTGGCGCGCCTGAGTTTGATCAATGGCGATGTGTCGGTCCGGCGCGGCGACGCCG GAGAGTGGGTGGCGGGAGTGGTTAACGCGCCACTGCTGACCGATGACCGGATCGGGACCGGTCCGAACTCCCGTACGGAG CTCCAGTTTGACGCAGCCAATGTGTTGCGGCTGGGCGCGAACGCAGGACTGCAGCTGACGGATATCGAATATGGCCGGAT CCAATTGGACCTGGCGCACGGCGTTATGACTTACCGGGTGCTGCGCAGCGTCAATTCGAATATCGAGATCGATACTCCCA GTTTGTCGGTGAGGCCGTCGAGGGAGGGAAGTGTCCGCATCTCGGTGAACGACGCGGGGGAAACCGAAGTGACGGCGCGC GGGGGCGATGTCGAGATTTTCAATCCGAAGGGGTCGCAGTGGCTGCATAACGGACAGACGATGATGGCTCGCGGGTCGTC GGGCGACCCGGAGTTCCAGATCGTCAACGCCGGCGGTCCGGACGAGTGGGACCGTTGGTGCGACAGCCGCGACCGGCTCA TCATGCAATCGGTGAGCTCGCGGTATGTGGGTCCGGGCGTATACGGTACCGAAGATCTGGATGCGGCGGGCAGCTGGCAG AATGCTCCGGAGTACGGCAATGTCTGGCATCCGACGGCGGTACCGGCTGATTGGGCGCCGTACCAGGCCGGTCGGTGGGT TTGGGACGATTGGTATGGCTGGACCTGGGTCAGCTACGATCCCTGGGGCTGGGCGCCGTACCACTATGGGCGCTGGTTCC ACAACGATCGCATCGGGTGGTGTTGGTATCCCGGTTTGATCGGCGTGCGGCACTACTGGTCTCCGGCGCTGGTGGCCTTC GTCGGCTTCGGGCGCGGCGGTGGCGTCGGGTTCGGTTTCGGCAATATCGGCTGGGTTCCTTTGGCACCGTATGAGGTCTT CCACCCGTGGTGGGGCCGAGGATTCTACGGCGCGAACCGCTTCAACCGAACAGTGAACATTACCAACGTAAATATCACAA ACGTATATAGAAATTCACGCGTTAGCTATGGTGTGAGCGCGGTTGGAGTCAACGATTTTCAGAACGGCCGCTTCAACCAT GTGGCGCGGATGACGGGAACCCAGATCGGACAGGTAGGAGCCGTGCAGGGGCATCTGCCGCTGGCGCCTGGCAACGCGAG CATGCGGTTTTCAGACCGGCAGGCATCGGTTGTGCCGCGCGGGATGGAGAATACTAGGTTCTTCCGGCAGCAGCAGCCGG CGGGCATTCAGCGGACGCCGATGACTGGCGCGCAGAATGCGGTTCGCGGCGGACAGCCCGGGGTGACGGGACAGGATAAC GGATGGCGGCGGTTCGGGTCGCCGGGCAGCCAGCCCACGAGTTCGCAGCCGAACCAGGCAGGTGTGACCCGGAATGGGTT CGGCTCGCAGGCGCAACGTCAGCCGGCAGCGCCGCAAAGCACGCAGCAGGCGGCTCCGCGCAACGACGTGAACCGCGGCG GGTGGCAGCGGTTCGGGAGTCCGGCGCCCGGGAATAGCAATCCGCCGGAGCAAAGGCAGCAGCAGGCTCCGGCGCCGCGG CAGAACAATTATCAGTCCAGCCCGTATAACAGCCGGCCTCAGCAGCAGCAGAGCGCTCCGGCACGCGGCAACCAATATGT AGGCGGCGCGGGCCGGCAGGAATCGCTGCGGATCGCGCCTCCTGTAGTCCGCGAGCGGCCGAGCTATAGTGCGCCTCGGC AGAGCGCACCGAGCTACAGCGCTCCGCGGCAGAGCGCACCGAGCGCTCCGCGGCAAGGCGCGCCGAGCAATGGCGGCGGA TCGCACGGCAATTCGGGCGGCAGCCATGGTAATTCCGGTGGCAACCATGGGGGCAAGTCGCGATAA
Upstream 100 bases:
>100_bases ACCAAAGGTAGCGTGCCCACCGTAACGTATTGATTTCATAAGCACTAAGAATTTGGCCCGAACCGTGCAATAATCTCGGC GAAGTTTGGGAGACCCGGTT
Downstream 100 bases:
>100_bases CGAGTTTCTTCAACTGCGGTAACTTCTTCCCAACTTGGCCCGGTCCCATTCAGCGGGGACCGGGCCGTTTTTTGGTCCCG GCACTTTAGTTGACATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MRLIGNSRWLAVTGAVLAFAALPVRAQDQDDLKRGVARLSLINGDVSVRRGDAGEWVAGVVNAPLLTDDRIGTGPNSRTE LQFDAANVLRLGANAGLQLTDIEYGRIQLDLAHGVMTYRVLRSVNSNIEIDTPSLSVRPSREGSVRISVNDAGETEVTAR GGDVEIFNPKGSQWLHNGQTMMARGSSGDPEFQIVNAGGPDEWDRWCDSRDRLIMQSVSSRYVGPGVYGTEDLDAAGSWQ NAPEYGNVWHPTAVPADWAPYQAGRWVWDDWYGWTWVSYDPWGWAPYHYGRWFHNDRIGWCWYPGLIGVRHYWSPALVAF VGFGRGGGVGFGFGNIGWVPLAPYEVFHPWWGRGFYGANRFNRTVNITNVNITNVYRNSRVSYGVSAVGVNDFQNGRFNH VARMTGTQIGQVGAVQGHLPLAPGNASMRFSDRQASVVPRGMENTRFFRQQQPAGIQRTPMTGAQNAVRGGQPGVTGQDN GWRRFGSPGSQPTSSQPNQAGVTRNGFGSQAQRQPAAPQSTQQAAPRNDVNRGGWQRFGSPAPGNSNPPEQRQQQAPAPR QNNYQSSPYNSRPQQQQSAPARGNQYVGGAGRQESLRIAPPVVRERPSYSAPRQSAPSYSAPRQSAPSAPRQGAPSNGGG SHGNSGGSHGNSGGNHGGKSR
Sequences:
>Translated_661_residues MRLIGNSRWLAVTGAVLAFAALPVRAQDQDDLKRGVARLSLINGDVSVRRGDAGEWVAGVVNAPLLTDDRIGTGPNSRTE LQFDAANVLRLGANAGLQLTDIEYGRIQLDLAHGVMTYRVLRSVNSNIEIDTPSLSVRPSREGSVRISVNDAGETEVTAR GGDVEIFNPKGSQWLHNGQTMMARGSSGDPEFQIVNAGGPDEWDRWCDSRDRLIMQSVSSRYVGPGVYGTEDLDAAGSWQ NAPEYGNVWHPTAVPADWAPYQAGRWVWDDWYGWTWVSYDPWGWAPYHYGRWFHNDRIGWCWYPGLIGVRHYWSPALVAF VGFGRGGGVGFGFGNIGWVPLAPYEVFHPWWGRGFYGANRFNRTVNITNVNITNVYRNSRVSYGVSAVGVNDFQNGRFNH VARMTGTQIGQVGAVQGHLPLAPGNASMRFSDRQASVVPRGMENTRFFRQQQPAGIQRTPMTGAQNAVRGGQPGVTGQDN GWRRFGSPGSQPTSSQPNQAGVTRNGFGSQAQRQPAAPQSTQQAAPRNDVNRGGWQRFGSPAPGNSNPPEQRQQQAPAPR QNNYQSSPYNSRPQQQQSAPARGNQYVGGAGRQESLRIAPPVVRERPSYSAPRQSAPSYSAPRQSAPSAPRQGAPSNGGG SHGNSGGSHGNSGGNHGGKSR >Mature_661_residues MRLIGNSRWLAVTGAVLAFAALPVRAQDQDDLKRGVARLSLINGDVSVRRGDAGEWVAGVVNAPLLTDDRIGTGPNSRTE LQFDAANVLRLGANAGLQLTDIEYGRIQLDLAHGVMTYRVLRSVNSNIEIDTPSLSVRPSREGSVRISVNDAGETEVTAR GGDVEIFNPKGSQWLHNGQTMMARGSSGDPEFQIVNAGGPDEWDRWCDSRDRLIMQSVSSRYVGPGVYGTEDLDAAGSWQ NAPEYGNVWHPTAVPADWAPYQAGRWVWDDWYGWTWVSYDPWGWAPYHYGRWFHNDRIGWCWYPGLIGVRHYWSPALVAF VGFGRGGGVGFGFGNIGWVPLAPYEVFHPWWGRGFYGANRFNRTVNITNVNITNVYRNSRVSYGVSAVGVNDFQNGRFNH VARMTGTQIGQVGAVQGHLPLAPGNASMRFSDRQASVVPRGMENTRFFRQQQPAGIQRTPMTGAQNAVRGGQPGVTGQDN GWRRFGSPGSQPTSSQPNQAGVTRNGFGSQAQRQPAAPQSTQQAAPRNDVNRGGWQRFGSPAPGNSNPPEQRQQQAPAPR QNNYQSSPYNSRPQQQQSAPARGNQYVGGAGRQESLRIAPPVVRERPSYSAPRQSAPSYSAPRQSAPSAPRQGAPSNGGG SHGNSGGSHGNSGGNHGGKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71824; Mature: 71824
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIGNSRWLAVTGAVLAFAALPVRAQDQDDLKRGVARLSLINGDVSVRRGDAGEWVAGV CCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCEEEEECCCCHHHHHH VNAPLLTDDRIGTGPNSRTELQFDAANVLRLGANAGLQLTDIEYGRIQLDLAHGVMTYRV HCCCEEECCCCCCCCCCCEEEEECHHHHEEECCCCCEEEEEECCCEEEEEHHHHHHHHHH LRSVNSNIEIDTPSLSVRPSREGSVRISVNDAGETEVTARGGDVEIFNPKGSQWLHNGQT HHHHCCCEEEECCCEEECCCCCCCEEEEECCCCCEEEEECCCCEEEECCCCCCEEECCCE MMARGSSGDPEFQIVNAGGPDEWDRWCDSRDRLIMQSVSSRYVGPGVYGTEDLDAAGSWQ EEEECCCCCCCEEEEECCCCCHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC NAPEYGNVWHPTAVPADWAPYQAGRWVWDDWYGWTWVSYDPWGWAPYHYGRWFHNDRIGW CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCEEECCCCEE CWYPGLIGVRHYWSPALVAFVGFGRGGGVGFGFGNIGWVPLAPYEVFHPWWGRGFYGANR EECCCHHHHHHHCCHHEEHHEECCCCCCCCCCCCCCCCEECCCHHHHCCCCCCCCCCCCC FNRTVNITNVNITNVYRNSRVSYGVSAVGVNDFQNGRFNHVARMTGTQIGQVGAVQGHLP CCCEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCEECCCCE LAPGNASMRFSDRQASVVPRGMENTRFFRQQQPAGIQRTPMTGAQNAVRGGQPGVTGQDN ECCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC GWRRFGSPGSQPTSSQPNQAGVTRNGFGSQAQRQPAAPQSTQQAAPRNDVNRGGWQRFGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCHHHHCCC PAPGNSNPPEQRQQQAPAPRQNNYQSSPYNSRPQQQQSAPARGNQYVGGAGRQESLRIAP CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECC PVVRERPSYSAPRQSAPSYSAPRQSAPSAPRQGAPSNGGGSHGNSGGSHGNSGGNHGGKS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC R C >Mature Secondary Structure MRLIGNSRWLAVTGAVLAFAALPVRAQDQDDLKRGVARLSLINGDVSVRRGDAGEWVAGV CCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCEEEEECCCCHHHHHH VNAPLLTDDRIGTGPNSRTELQFDAANVLRLGANAGLQLTDIEYGRIQLDLAHGVMTYRV HCCCEEECCCCCCCCCCCEEEEECHHHHEEECCCCCEEEEEECCCEEEEEHHHHHHHHHH LRSVNSNIEIDTPSLSVRPSREGSVRISVNDAGETEVTARGGDVEIFNPKGSQWLHNGQT HHHHCCCEEEECCCEEECCCCCCCEEEEECCCCCEEEEECCCCEEEECCCCCCEEECCCE MMARGSSGDPEFQIVNAGGPDEWDRWCDSRDRLIMQSVSSRYVGPGVYGTEDLDAAGSWQ EEEECCCCCCCEEEEECCCCCHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC NAPEYGNVWHPTAVPADWAPYQAGRWVWDDWYGWTWVSYDPWGWAPYHYGRWFHNDRIGW CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCEEECCCCEE CWYPGLIGVRHYWSPALVAFVGFGRGGGVGFGFGNIGWVPLAPYEVFHPWWGRGFYGANR EECCCHHHHHHHCCHHEEHHEECCCCCCCCCCCCCCCCEECCCHHHHCCCCCCCCCCCCC FNRTVNITNVNITNVYRNSRVSYGVSAVGVNDFQNGRFNHVARMTGTQIGQVGAVQGHLP CCCEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCEECCCCE LAPGNASMRFSDRQASVVPRGMENTRFFRQQQPAGIQRTPMTGAQNAVRGGQPGVTGQDN ECCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC GWRRFGSPGSQPTSSQPNQAGVTRNGFGSQAQRQPAAPQSTQQAAPRNDVNRGGWQRFGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCHHHHCCC PAPGNSNPPEQRQQQAPAPRQNNYQSSPYNSRPQQQQSAPARGNQYVGGAGRQESLRIAP CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECC PVVRERPSYSAPRQSAPSYSAPRQSAPSAPRQGAPSNGGGSHGNSGGSHGNSGGNHGGKS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA