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The map label for this gene is yjgF [C]

Identifier: 116622858

GI number: 116622858

Start: 4776247

End: 4776735

Strand: Direct

Name: yjgF [C]

Synonym: Acid_3759

Alternate gene names: 116622858

Gene position: 4776247-4776735 (Clockwise)

Preceding gene: 116622847

Following gene: 116622859

Centisome position: 47.93

GC content: 57.87

Gene sequence:

>489_bases
ATGATTCTGGAAGCGGAACTCCTGCAAAATCTCGCTGCGCTGCCTGTCGAGAAACGCGCCATTACCAACCTCCGCGTGCT
CAATGAAGCTTATGACTACGCCAAACCCAGTTCTTTCGTTCGCGGCATGCGCATCGACTTGAACGGCCTCACGATCCTTC
TGATATCCGGCACCGCCAGCATCGATGAGAATGGCGTGAGCGTACACATCGGCGATTTCCGCGCGCAATTGCGCCGCACT
TACCAGAACATCACGGGACTGCTCGAGGCAGAAGGCGCCACCTGGCACGATATTGTCCGCACCACCTGCTACCTGCGCGA
TATCGAACGCGATTACGAAGCGTTTAACGAAGAGCGGACCGCCTTCTTCCGCGAGCAGCAGCTTGACCCCATGCCTGCTT
CCACTGGAATTCAGGCGATCCTGTGCCGGCCGGAACTGCTGATCGAAATCGAAGCGATCGCCATGTTCCGCACCAATCCG
CGGGCGTAG

Upstream 100 bases:

>100_bases
GTGTACGGGTATTCCGCCTCGAAACGCATGCCGACAATGTAAAAGTATGTAACCACTGCCGTTTACAGCAACTTTACCGG
AGTTTCAGGTATTATTAGGC

Downstream 100 bases:

>100_bases
GTCATGCGCCGCACGGCCCTTTTCCTGTTTGCCCTGACCGCCGCCCACGGCGCCGAGCCGAAGCTCAAGCTCAACTACCT
GCAGGCGGCGCCGGGCGACT

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Endoribonuclease L-PSP Family; Endoribonuclease

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MILEAELLQNLAALPVEKRAITNLRVLNEAYDYAKPSSFVRGMRIDLNGLTILLISGTASIDENGVSVHIGDFRAQLRRT
YQNITGLLEAEGATWHDIVRTTCYLRDIERDYEAFNEERTAFFREQQLDPMPASTGIQAILCRPELLIEIEAIAMFRTNP
RA

Sequences:

>Translated_162_residues
MILEAELLQNLAALPVEKRAITNLRVLNEAYDYAKPSSFVRGMRIDLNGLTILLISGTASIDENGVSVHIGDFRAQLRRT
YQNITGLLEAEGATWHDIVRTTCYLRDIERDYEAFNEERTAFFREQQLDPMPASTGIQAILCRPELLIEIEAIAMFRTNP
RA
>Mature_162_residues
MILEAELLQNLAALPVEKRAITNLRVLNEAYDYAKPSSFVRGMRIDLNGLTILLISGTASIDENGVSVHIGDFRAQLRRT
YQNITGLLEAEGATWHDIVRTTCYLRDIERDYEAFNEERTAFFREQQLDPMPASTGIQAILCRPELLIEIEAIAMFRTNP
RA

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18371; Mature: 18371

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILEAELLQNLAALPVEKRAITNLRVLNEAYDYAKPSSFVRGMRIDLNGLTILLISGTAS
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHCCEEEECCCEEEEEEECCCC
IDENGVSVHIGDFRAQLRRTYQNITGLLEAEGATWHDIVRTTCYLRDIERDYEAFNEERT
CCCCCCEEEEHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AFFREQQLDPMPASTGIQAILCRPELLIEIEAIAMFRTNPRA
HHHHHHCCCCCCCCCCCEEEEECCHHEEEEEHEEEECCCCCC
>Mature Secondary Structure
MILEAELLQNLAALPVEKRAITNLRVLNEAYDYAKPSSFVRGMRIDLNGLTILLISGTAS
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHCCEEEECCCEEEEEEECCCC
IDENGVSVHIGDFRAQLRRTYQNITGLLEAEGATWHDIVRTTCYLRDIERDYEAFNEERT
CCCCCCEEEEHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AFFREQQLDPMPASTGIQAILCRPELLIEIEAIAMFRTNPRA
HHHHHHCCCCCCCCCCCEEEEECCHHEEEEEHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA