| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622835
Identifier: 116622835
GI number: 116622835
Start: 4744719
End: 4746380
Strand: Reverse
Name: 116622835
Synonym: Acid_3735
Alternate gene names: NA
Gene position: 4746380-4744719 (Counterclockwise)
Preceding gene: 116622836
Following gene: 116622834
Centisome position: 47.63
GC content: 64.62
Gene sequence:
>1662_bases ATGCGAACGACCTTGACTTTGGCCCTGTTCTCGGTGGCCTGCCTGGCGCAAACACCAACGCCACCGCCCACCGGGACGAT CCGCGGCCTGGTGCTGGATGCCGCCACCGGCGACCCCGTGCCGGACGCCGATGTCTCGGCGCGCGCCGGCGGAAAATCGG TAGACGCCGCCACCGATGCGCAAGGCGCCTACACGTTGCGCGACGTGCCACCCGGAAAGGTGCAAATGCGCGCCGGCTTG CGCGCCAATGGCTCGCGGGGCTTCGGCGCCTTTGCGACGAAGTTGGTGACTCTCGCCGCCGGCCAGGACGTGAACGGCAT CACCTTCCGCGTTGCGCGGCACGGCGAGATCACCGGCAAGGTGCTCGATGAAAATAAGGCTCCGATGACCGGCATCACGG TCTTCCTGGTGGCGCCGGAATATCGCCGTGGAGTGCTGCGGCATGCCTACGCGAGTTCGGCTACCACCAATGATCGCGGC GAGTACCGGGTCCAGCGCGTAGTGCCTGGGCGCGTGTATTTGCTGGTGGCCGCGCAGCGGCGCCGTGCTCTCGACGCAAT TTCGGACGCGCCCGCCGACCCGAAGCTGCGCAAGAAGGTGCCGGCGCCGACCTTCTATCCCAACTCGCCTTCGATGGATG GCGCCATGGCAATCACGCTGCGCCCGGGTGAAACGCGCGAAGGCATGGATATCCGGATGCTGCGCACGCCATCGCTCTGC GTGGAAGCGACGCTCGATAACGGACTGGGTCCGGCTGCGCTGCGCTTCGAGATCGAAGAGACGGAGCCTCACAACGGGTC GAGCGGCGACGGCGGCTTCTATTACGTGACACCCAGTGGGATGGCGGGACCGGACGGCAAGATTCGCATCTGCGAACTGC ACGCCGGTCAATATCAGCTGACCGCTTCGGGGCCGCCGGCCACCGCCGAGGGGACGCCCTTCTACGGATCCACCGTGGTG ACCATCGGGAAAGAGGATGTGCGCAACCTGAAGGTGCCGGGGACCGCGGCAAGGCCGCTGACCGGCGAAGTGGTATGGGA TGGAACGGCACCGCAAAAGGAATACACAGAGAAGCTCAACGTCAGCCTGAATGCGCCCAAACGCTCCTATCGCAGTTTCG GCGGCGTGTCGGAAGCGCGGTCCGCGAGGGCGGCGATCCCCGGGGCGTTTTCGATTCCCTTTGTGTTGATGGATGAGTAC GAAATCGATGTCACCGGCCTGCCGCAGGGGCTTTACGTGAAGGACATACTCTATGGCACGGCGAGTGTGAAGAATGACGT GCTGCACGTTGGCAGCGCCTCGGCCGGCACGGGGCTGAAAATTGTGCTCGGCCAGGACGGAGGCAGCGTGAGCGCAAAGG TCACCGACAAGGATGGGAATCCAGTGGGCGATCAAAATGTGTTGCTGATGCCGCAGAGCGCGGGCTCCGAGGCGCAATTT GCGGCGGCGCTGATTTTCGGACAAACCGACCAGAACGGCGTCTACCAGACGGCCACGGTGCCGCCCGGCAAATATCTTGT GCTGGCGACCAGCCTGACGGTGGACCGGACACCGGAAACGATCCGGCAGTTGATGGGCATGCGCAATCGCGCCACGGAAA TCGATGTCGCCGCGGGAGCGCGCGTACAAATCACGCCAATAGTCACGGGAGCTCCGCAATGA
Upstream 100 bases:
>100_bases GTAACCGACACTGCGCAGATGATCGAACTCGACGTCGCTGGCGGCGGCCCCACCGACGTCGAACTGCCGTGTCCCGCCGC GAAGCAGCAATGAGGAAGTG
Downstream 100 bases:
>100_bases AACTCGCAGGCTTGTTGCTGCTGTCCGGCGCGGCGTACGCGCAGCTGAGCGGTGTAATCGATATCCACGTGCACGCCGAT CCCGACTCGATTCCGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MRTTLTLALFSVACLAQTPTPPPTGTIRGLVLDAATGDPVPDADVSARAGGKSVDAATDAQGAYTLRDVPPGKVQMRAGL RANGSRGFGAFATKLVTLAAGQDVNGITFRVARHGEITGKVLDENKAPMTGITVFLVAPEYRRGVLRHAYASSATTNDRG EYRVQRVVPGRVYLLVAAQRRRALDAISDAPADPKLRKKVPAPTFYPNSPSMDGAMAITLRPGETREGMDIRMLRTPSLC VEATLDNGLGPAALRFEIEETEPHNGSSGDGGFYYVTPSGMAGPDGKIRICELHAGQYQLTASGPPATAEGTPFYGSTVV TIGKEDVRNLKVPGTAARPLTGEVVWDGTAPQKEYTEKLNVSLNAPKRSYRSFGGVSEARSARAAIPGAFSIPFVLMDEY EIDVTGLPQGLYVKDILYGTASVKNDVLHVGSASAGTGLKIVLGQDGGSVSAKVTDKDGNPVGDQNVLLMPQSAGSEAQF AAALIFGQTDQNGVYQTATVPPGKYLVLATSLTVDRTPETIRQLMGMRNRATEIDVAAGARVQITPIVTGAPQ
Sequences:
>Translated_553_residues MRTTLTLALFSVACLAQTPTPPPTGTIRGLVLDAATGDPVPDADVSARAGGKSVDAATDAQGAYTLRDVPPGKVQMRAGL RANGSRGFGAFATKLVTLAAGQDVNGITFRVARHGEITGKVLDENKAPMTGITVFLVAPEYRRGVLRHAYASSATTNDRG EYRVQRVVPGRVYLLVAAQRRRALDAISDAPADPKLRKKVPAPTFYPNSPSMDGAMAITLRPGETREGMDIRMLRTPSLC VEATLDNGLGPAALRFEIEETEPHNGSSGDGGFYYVTPSGMAGPDGKIRICELHAGQYQLTASGPPATAEGTPFYGSTVV TIGKEDVRNLKVPGTAARPLTGEVVWDGTAPQKEYTEKLNVSLNAPKRSYRSFGGVSEARSARAAIPGAFSIPFVLMDEY EIDVTGLPQGLYVKDILYGTASVKNDVLHVGSASAGTGLKIVLGQDGGSVSAKVTDKDGNPVGDQNVLLMPQSAGSEAQF AAALIFGQTDQNGVYQTATVPPGKYLVLATSLTVDRTPETIRQLMGMRNRATEIDVAAGARVQITPIVTGAPQ >Mature_553_residues MRTTLTLALFSVACLAQTPTPPPTGTIRGLVLDAATGDPVPDADVSARAGGKSVDAATDAQGAYTLRDVPPGKVQMRAGL RANGSRGFGAFATKLVTLAAGQDVNGITFRVARHGEITGKVLDENKAPMTGITVFLVAPEYRRGVLRHAYASSATTNDRG EYRVQRVVPGRVYLLVAAQRRRALDAISDAPADPKLRKKVPAPTFYPNSPSMDGAMAITLRPGETREGMDIRMLRTPSLC VEATLDNGLGPAALRFEIEETEPHNGSSGDGGFYYVTPSGMAGPDGKIRICELHAGQYQLTASGPPATAEGTPFYGSTVV TIGKEDVRNLKVPGTAARPLTGEVVWDGTAPQKEYTEKLNVSLNAPKRSYRSFGGVSEARSARAAIPGAFSIPFVLMDEY EIDVTGLPQGLYVKDILYGTASVKNDVLHVGSASAGTGLKIVLGQDGGSVSAKVTDKDGNPVGDQNVLLMPQSAGSEAQF AAALIFGQTDQNGVYQTATVPPGKYLVLATSLTVDRTPETIRQLMGMRNRATEIDVAAGARVQITPIVTGAPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58141; Mature: 58141
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTLTLALFSVACLAQTPTPPPTGTIRGLVLDAATGDPVPDADVSARAGGKSVDAATDA CCEEEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC QGAYTLRDVPPGKVQMRAGLRANGSRGFGAFATKLVTLAAGQDVNGITFRVARHGEITGK CCCEEEECCCCCCEEEEECCCCCCCCCHHHHHHEEEEEECCCCCCCEEEEEEECCCEEEE VLDENKAPMTGITVFLVAPEYRRGVLRHAYASSATTNDRGEYRVQRVVPGRVYLLVAAQR EECCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECHH RRALDAISDAPADPKLRKKVPAPTFYPNSPSMDGAMAITLRPGETREGMDIRMLRTPSLC HHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEE VEATLDNGLGPAALRFEIEETEPHNGSSGDGGFYYVTPSGMAGPDGKIRICELHAGQYQL EEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCEEEE TASGPPATAEGTPFYGSTVVTIGKEDVRNLKVPGTAARPLTGEVVWDGTAPQKEYTEKLN EECCCCCCCCCCCCCCCEEEEECHHHHHEECCCCCCCCCCCCEEEECCCCCHHHHHHHEE VSLNAPKRSYRSFGGVSEARSARAAIPGAFSIPFVLMDEYEIDVTGLPQGLYVKDILYGT EEECCCHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECEEEEEECCCCCCEEEHHHHCC ASVKNDVLHVGSASAGTGLKIVLGQDGGSVSAKVTDKDGNPVGDQNVLLMPQSAGSEAQF CCCCCCEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEE AAALIFGQTDQNGVYQTATVPPGKYLVLATSLTVDRTPETIRQLMGMRNRATEIDVAAGA EEEEEECCCCCCCEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCEEEEECCC RVQITPIVTGAPQ EEEEEEEECCCCC >Mature Secondary Structure MRTTLTLALFSVACLAQTPTPPPTGTIRGLVLDAATGDPVPDADVSARAGGKSVDAATDA CCEEEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC QGAYTLRDVPPGKVQMRAGLRANGSRGFGAFATKLVTLAAGQDVNGITFRVARHGEITGK CCCEEEECCCCCCEEEEECCCCCCCCCHHHHHHEEEEEECCCCCCCEEEEEEECCCEEEE VLDENKAPMTGITVFLVAPEYRRGVLRHAYASSATTNDRGEYRVQRVVPGRVYLLVAAQR EECCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECHH RRALDAISDAPADPKLRKKVPAPTFYPNSPSMDGAMAITLRPGETREGMDIRMLRTPSLC HHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEE VEATLDNGLGPAALRFEIEETEPHNGSSGDGGFYYVTPSGMAGPDGKIRICELHAGQYQL EEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCEEEE TASGPPATAEGTPFYGSTVVTIGKEDVRNLKVPGTAARPLTGEVVWDGTAPQKEYTEKLN EECCCCCCCCCCCCCCCEEEEECHHHHHEECCCCCCCCCCCCEEEECCCCCHHHHHHHEE VSLNAPKRSYRSFGGVSEARSARAAIPGAFSIPFVLMDEYEIDVTGLPQGLYVKDILYGT EEECCCHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECEEEEEECCCCCCEEEHHHHCC ASVKNDVLHVGSASAGTGLKIVLGQDGGSVSAKVTDKDGNPVGDQNVLLMPQSAGSEAQF CCCCCCEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEE AAALIFGQTDQNGVYQTATVPPGKYLVLATSLTVDRTPETIRQLMGMRNRATEIDVAAGA EEEEEECCCCCCCEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCEEEEECCC RVQITPIVTGAPQ EEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA