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The map label for this gene is yfgC [H]

Identifier: 116622817

GI number: 116622817

Start: 4721474

End: 4722403

Strand: Direct

Name: yfgC [H]

Synonym: Acid_3717

Alternate gene names: 116622817

Gene position: 4721474-4722403 (Clockwise)

Preceding gene: 116622814

Following gene: 116622818

Centisome position: 47.38

GC content: 63.12

Gene sequence:

>930_bases
ATGAGATTCCTGCACGCGTCGGTTTGCCTCCTGACACTGACCGCACATTCGCTGTTTCCCCAAAATAAGAAGGGCGACCC
CGCGCAGATCGGCAACCGCGACGTGGGCAAAGGTGTCAACATCTACTCCATCGAGCGCGAAATGGCGCTCGGCAAACAGC
TCGCCCAGGAAGTCCAGCGCCAGGCCAAGGTCGTGGACGATCCGCTGATCTCGGAGTACATCAACCGGGTCGGCCAGAGC
CTGGTGCGCAACTCGGATGCGAAGGTGCCCTTCACCTTCCAGCTCATCGAGGGCGATTCACCGAACGCGTTCGCCCTGCC
TGGGGGCTACATCTTCGTCTACACCGCCCTGATCAAGATCGCAGACGAGGAGGACGAGCTCGCCGCCGCGCTTGCCCACG
AAATCGCCCACGTCGCCGCGCGCCACATGACCAGGCAGGCCACCAAGTCTGAAATCGTCAACATGGCCACCATTCCCGTG
GGCGTGATTCTCGGCGGCGGACTCGCCGGTATCGCCGCCCGCCAGGGCGCGAACCTCGGTGTCCCAGCGGCTTTCCTCCA
CTTCACCCGCAAGGATGAGGCGGAGGCCGACTTCCTCGGTCTGCAGTACCTCTACGCCGCAGGCTACGACCCCAATGGCG
CCATCAGCATTTTCGAAAAGCTCGAGTCCCTGCAAAAGAGCAAGCCCGGCACCGTCGCCCGCATCTTCTCCACCCATCCG
ATGGACGCCGACCGCATCCAGAAGGCCGAAAGCGAGATCAACCGCATCCTCCCCGCGCGCGATGAATACGTGATCAACAC
GTCGGAGTACCGCGGCATGCGCGAGCGCCTCATCACCCGAGACATGCGCAAGCGATCGATCTCGACCACTCAGGGCAGGG
AAGACGACCCGGACCGTCCCACCATCCGCCGCCGCGACTTGATTGAGTAG

Upstream 100 bases:

>100_bases
GGCATAACGCTGCCAAAGCGGTATCTCCGCCACAGAACTATTTACAATTTCACGACCCATTCCCTCTACAATACGAAATA
ATGGGCATAAGGAGTAGGCG

Downstream 100 bases:

>100_bases
AAAGGCGTTCTTCGCGAGAGACGCCGAAAGAAATTTCTCTCGCAACGGCGCAAAGGACGCAAAGAAGAACAGCTTCCGGC
TGAAATTCTTCTTGGCGTTA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRFLHASVCLLTLTAHSLFPQNKKGDPAQIGNRDVGKGVNIYSIEREMALGKQLAQEVQRQAKVVDDPLISEYINRVGQS
LVRNSDAKVPFTFQLIEGDSPNAFALPGGYIFVYTALIKIADEEDELAAALAHEIAHVAARHMTRQATKSEIVNMATIPV
GVILGGGLAGIAARQGANLGVPAAFLHFTRKDEAEADFLGLQYLYAAGYDPNGAISIFEKLESLQKSKPGTVARIFSTHP
MDADRIQKAESEINRILPARDEYVINTSEYRGMRERLITRDMRKRSISTTQGREDDPDRPTIRRRDLIE

Sequences:

>Translated_309_residues
MRFLHASVCLLTLTAHSLFPQNKKGDPAQIGNRDVGKGVNIYSIEREMALGKQLAQEVQRQAKVVDDPLISEYINRVGQS
LVRNSDAKVPFTFQLIEGDSPNAFALPGGYIFVYTALIKIADEEDELAAALAHEIAHVAARHMTRQATKSEIVNMATIPV
GVILGGGLAGIAARQGANLGVPAAFLHFTRKDEAEADFLGLQYLYAAGYDPNGAISIFEKLESLQKSKPGTVARIFSTHP
MDADRIQKAESEINRILPARDEYVINTSEYRGMRERLITRDMRKRSISTTQGREDDPDRPTIRRRDLIE
>Mature_309_residues
MRFLHASVCLLTLTAHSLFPQNKKGDPAQIGNRDVGKGVNIYSIEREMALGKQLAQEVQRQAKVVDDPLISEYINRVGQS
LVRNSDAKVPFTFQLIEGDSPNAFALPGGYIFVYTALIKIADEEDELAAALAHEIAHVAARHMTRQATKSEIVNMATIPV
GVILGGGLAGIAARQGANLGVPAAFLHFTRKDEAEADFLGLQYLYAAGYDPNGAISIFEKLESLQKSKPGTVARIFSTHP
MDADRIQKAESEINRILPARDEYVINTSEYRGMRERLITRDMRKRSISTTQGREDDPDRPTIRRRDLIE

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=236, Percent_Identity=33.8983050847458, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI87082185, Length=204, Percent_Identity=30.3921568627451, Blast_Score=79, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6322940, Length=168, Percent_Identity=32.1428571428571, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 34202; Mature: 34202

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLHASVCLLTLTAHSLFPQNKKGDPAQIGNRDVGKGVNIYSIEREMALGKQLAQEVQR
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
QAKVVDDPLISEYINRVGQSLVRNSDAKVPFTFQLIEGDSPNAFALPGGYIFVYTALIKI
HHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHH
ADEEDELAAALAHEIAHVAARHMTRQATKSEIVNMATIPVGVILGGGLAGIAARQGANLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
VPAAFLHFTRKDEAEADFLGLQYLYAAGYDPNGAISIFEKLESLQKSKPGTVARIFSTHP
CCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCC
MDADRIQKAESEINRILPARDEYVINTSEYRGMRERLITRDMRKRSISTTQGREDDPDRP
CCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
TIRRRDLIE
CCCHHCCCC
>Mature Secondary Structure
MRFLHASVCLLTLTAHSLFPQNKKGDPAQIGNRDVGKGVNIYSIEREMALGKQLAQEVQR
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
QAKVVDDPLISEYINRVGQSLVRNSDAKVPFTFQLIEGDSPNAFALPGGYIFVYTALIKI
HHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHH
ADEEDELAAALAHEIAHVAARHMTRQATKSEIVNMATIPVGVILGGGLAGIAARQGANLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
VPAAFLHFTRKDEAEADFLGLQYLYAAGYDPNGAISIFEKLESLQKSKPGTVARIFSTHP
CCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCC
MDADRIQKAESEINRILPARDEYVINTSEYRGMRERLITRDMRKRSISTTQGREDDPDRP
CCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
TIRRRDLIE
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]