| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622811
Identifier: 116622811
GI number: 116622811
Start: 4710649
End: 4711881
Strand: Reverse
Name: 116622811
Synonym: Acid_3711
Alternate gene names: NA
Gene position: 4711881-4710649 (Counterclockwise)
Preceding gene: 116622812
Following gene: 116622810
Centisome position: 47.28
GC content: 62.53
Gene sequence:
>1233_bases ATGAACCGGAGATCATTCCTGGAACGATCATTCCTGGGGACGTTGGCGGCGGCATCGGCCGCAAGGGCCATGGCGGACGC GCTGCCGCCGGTGCGCGCGATCACCGAGGGTCCGCGCTTCCACTGGTTCGGATACTACGACAAGCTCCAGTTCGACCCCA CCAGCCGCTTCGCGCTGGGCGCATCCAACGATTTTCAGCATCGCCTGGTCACGGCCGGCGACACGATGACGCTCGGCATG GTTGATCTCGAGGATGGCGACAAGTGGATCGAGCTGGGCTCGACCAACGCCTGGAGCTGGCACCAGACCTGTATGCTGCA ATGGCTGCCCGGCTCCAGGGACGAAGTGATTTGGAATGACCGCCAAGGGTCGCGCTTTGTCTCTCACATTCTCAACGTGC GCACGCGCGAAAAGCGCACACTGCCGAGAGCGATCTACTGCGTGAGTCCCGATGCACGATGGGCGCTCTGCAACGATTTC GCGCGATCCGCCAGCATGCGTCCCGAGACCGGCTATATGGGAGGCACGGACCCGTATGCCGCCGAGTTGGCGCCCGCGAA ATCCGGCATCTGGCGCATGGACCTGAAGACCGGCGGCCAGGAACTGATTCTCTCCCTAGCCGACCTGGTGAAGATTCCGC TCACGCAAGGCGATTGGAGCGGCATGAAGCAGTACATCGATCACATCCTGATCGCGCCCGACGGGAAGCGTTTTTCGTTC CTGCAGCGCTGGGGCCAGGGTATCGGCACGGGCTTCTTCACCCGCATGTGTACGGCGGACGCGCACGGGAAAGCGCTGCG CGTGATCGACGAATCCGGGCAGGCATCGCACTACAACTGGCGCGACCCGGAGACGCTGATGCTGTGGACCAACCACCCTT CGCACGGCACTATCTGGTACCTCATTCACGAGCCCACCGTGAAGTTTGAAGTGCTGGATGCGGAGCGGATGAACCAGAAC GGGCACAATTCCTTCTTCCGCGGCGGCCGCTGGATCGCAAGCGATACGGCTCCCGATAAGGAACGCAAGCAGCACGAATA TCTGTACGATACGAAGACGCGCCGCAAGATCGAGCTGGGCGCATTCTACTCCGCGCCCGAGTACAAGGGCATCTGGCGCT GCGACACCACGCCGCGCGTCAGCCCCGACGCGCGCAAGCTGATCTTCGATTCGCCGCACGATGGCGTGGGCCGCCAGATG TACCTGATCGATATCTCGGAGATCGTGGGATAG
Upstream 100 bases:
>100_bases GATCGGGATGTGACGGCGTCGATTCGCGGGAAGCGCGTCCTGCTGAAGAAATACCAGCCGGTGACGCTCGGCGGCCGGTA ATCTGCGAGGAGGGCGACTG
Downstream 100 bases:
>100_bases CCGGAGTTAGAATAGGCCCATGCTGCTAGGCGCGGTCACGTACAACGTCCTGAAGGAGATGGACCTGGACACGGTCATCA CGACCCTGGAAGCGGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MNRRSFLERSFLGTLAAASAARAMADALPPVRAITEGPRFHWFGYYDKLQFDPTSRFALGASNDFQHRLVTAGDTMTLGM VDLEDGDKWIELGSTNAWSWHQTCMLQWLPGSRDEVIWNDRQGSRFVSHILNVRTREKRTLPRAIYCVSPDARWALCNDF ARSASMRPETGYMGGTDPYAAELAPAKSGIWRMDLKTGGQELILSLADLVKIPLTQGDWSGMKQYIDHILIAPDGKRFSF LQRWGQGIGTGFFTRMCTADAHGKALRVIDESGQASHYNWRDPETLMLWTNHPSHGTIWYLIHEPTVKFEVLDAERMNQN GHNSFFRGGRWIASDTAPDKERKQHEYLYDTKTRRKIELGAFYSAPEYKGIWRCDTTPRVSPDARKLIFDSPHDGVGRQM YLIDISEIVG
Sequences:
>Translated_410_residues MNRRSFLERSFLGTLAAASAARAMADALPPVRAITEGPRFHWFGYYDKLQFDPTSRFALGASNDFQHRLVTAGDTMTLGM VDLEDGDKWIELGSTNAWSWHQTCMLQWLPGSRDEVIWNDRQGSRFVSHILNVRTREKRTLPRAIYCVSPDARWALCNDF ARSASMRPETGYMGGTDPYAAELAPAKSGIWRMDLKTGGQELILSLADLVKIPLTQGDWSGMKQYIDHILIAPDGKRFSF LQRWGQGIGTGFFTRMCTADAHGKALRVIDESGQASHYNWRDPETLMLWTNHPSHGTIWYLIHEPTVKFEVLDAERMNQN GHNSFFRGGRWIASDTAPDKERKQHEYLYDTKTRRKIELGAFYSAPEYKGIWRCDTTPRVSPDARKLIFDSPHDGVGRQM YLIDISEIVG >Mature_410_residues MNRRSFLERSFLGTLAAASAARAMADALPPVRAITEGPRFHWFGYYDKLQFDPTSRFALGASNDFQHRLVTAGDTMTLGM VDLEDGDKWIELGSTNAWSWHQTCMLQWLPGSRDEVIWNDRQGSRFVSHILNVRTREKRTLPRAIYCVSPDARWALCNDF ARSASMRPETGYMGGTDPYAAELAPAKSGIWRMDLKTGGQELILSLADLVKIPLTQGDWSGMKQYIDHILIAPDGKRFSF LQRWGQGIGTGFFTRMCTADAHGKALRVIDESGQASHYNWRDPETLMLWTNHPSHGTIWYLIHEPTVKFEVLDAERMNQN GHNSFFRGGRWIASDTAPDKERKQHEYLYDTKTRRKIELGAFYSAPEYKGIWRCDTTPRVSPDARKLIFDSPHDGVGRQM YLIDISEIVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46705; Mature: 46705
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRSFLERSFLGTLAAASAARAMADALPPVRAITEGPRFHWFGYYDKLQFDPTSRFALG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECEEEECCCCCEEEC ASNDFQHRLVTAGDTMTLGMVDLEDGDKWIELGSTNAWSWHQTCMLQWLPGSRDEVIWND CCCCCCEEEEECCCEEEEEEEEECCCCCEEEECCCCCCCHHHEEEEEECCCCCCCEEEEC RQGSRFVSHILNVRTREKRTLPRAIYCVSPDARWALCNDFARSASMRPETGYMGGTDPYA CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCH AELAPAKSGIWRMDLKTGGQELILSLADLVKIPLTQGDWSGMKQYIDHILIAPDGKRFSF HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCHHHH LQRWGQGIGTGFFTRMCTADAHGKALRVIDESGQASHYNWRDPETLMLWTNHPSHGTIWY HHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEE LIHEPTVKFEVLDAERMNQNGHNSFFRGGRWIASDTAPDKERKQHEYLYDTKTRRKIELG EEECCCEEEEEECHHHCCCCCCCCHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEE AFYSAPEYKGIWRCDTTPRVSPDARKLIFDSPHDGVGRQMYLIDISEIVG EEECCCCCCCEEEECCCCCCCCCHHHEEECCCCCCCCCEEEEEEHHHHCC >Mature Secondary Structure MNRRSFLERSFLGTLAAASAARAMADALPPVRAITEGPRFHWFGYYDKLQFDPTSRFALG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECEEEECCCCCEEEC ASNDFQHRLVTAGDTMTLGMVDLEDGDKWIELGSTNAWSWHQTCMLQWLPGSRDEVIWND CCCCCCEEEEECCCEEEEEEEEECCCCCEEEECCCCCCCHHHEEEEEECCCCCCCEEEEC RQGSRFVSHILNVRTREKRTLPRAIYCVSPDARWALCNDFARSASMRPETGYMGGTDPYA CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCH AELAPAKSGIWRMDLKTGGQELILSLADLVKIPLTQGDWSGMKQYIDHILIAPDGKRFSF HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCHHHH LQRWGQGIGTGFFTRMCTADAHGKALRVIDESGQASHYNWRDPETLMLWTNHPSHGTIWY HHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEE LIHEPTVKFEVLDAERMNQNGHNSFFRGGRWIASDTAPDKERKQHEYLYDTKTRRKIELG EEECCCEEEEEECHHHCCCCCCCCHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEE AFYSAPEYKGIWRCDTTPRVSPDARKLIFDSPHDGVGRQMYLIDISEIVG EEECCCCCCCEEEECCCCCCCCCHHHEEECCCCCCCCCEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA