| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622768
Identifier: 116622768
GI number: 116622768
Start: 4653504
End: 4654880
Strand: Reverse
Name: 116622768
Synonym: Acid_3667
Alternate gene names: NA
Gene position: 4654880-4653504 (Counterclockwise)
Preceding gene: 116622770
Following gene: 116622762
Centisome position: 46.71
GC content: 59.4
Gene sequence:
>1377_bases ATGCTTCTTCGCGCCTGGTTGGACATCACTGCCGGCTGGCTCCCCGCCTTCCCCCAGCAGCGCTCTTTGCGCCGCGCCGT CCGCCTCGCTCTCGGCACCTTGTGCGCCTTCGGGCGTCGCACCCTCTCGCGCGCCATCTGCGCTGTCGGCCTGCAACATG TCGATTGGAGTGCCGAGTATTTACTCTTTGCCCGCTGCCGCTGGTACATCGACGACCTCTTTCAGCCCATTTTGCAGAAA GGCCTTCCCTTTTGCTCCGACGCTTATGTGGCCGTTGCCATGGATGATACCCGCCTGCATAAGACCGGCCGCAAAATTCA GTCCGCCTTCTATCAGCGCGATCCTCTCTCTCCGAAGTTTCGTGTCAACTTAATGTTCGGTCTCCGCTTCCTGCAGATGT CGCTGCTGGTCCCGCTCTACCGGGGCCAACAGCAATCAGCCCGTGCCCTGCCGGTGCGCTTTGTCGAGGTGCCTGCCGTT AAGAAACCGGGCAAGAAAGCCTCCCCGGAGGAGAAACTGGCCTGGAAACAGAAAACCAAGGAACTCAATCTCTCTACCCG TTCGGTAGAGGTTGCTCGCACTCTGCGCACCTCGCTGGATGCCGCCGGTGCTGCCGATCGCATTCTGCTTCTGGTAGGCG ATAACAGTTTCTGCAATCGCACTCATTTTCGCGCGGAGTGGGACCGCACCGAACTGATCGTCCGCGCTCGCCGGGATCTG AAACTCTGCCGGCGTGCTCCCCTCGGGGGCCCACGCTTTTACGATTCCACTAAGTTCACTCCCCTGGATGTGTATCAGGA CCAGTCCATCGTCTGGAAGAAAGCCAAAATCTTTCATGGCGGCCGTTGGAGAATGCTCCGTTACAAGGACGTTACGAACG TGTTCTGGCAAACCGGGGCCGGACAGAAGCCCCTGCGTTTATTGGTCGTCGCGCCGATCCCGTATCACGTCGGTGGCAGC AAACGGAGATCCCATCGGGATCCCGCCTTTCTGTTGACCACTGATCTGCCTGCCCCTGCCGGACACCTCTTGCAGCCCTA CTTCGACCGCTGGCAGATCGAAGTCAATCATCGGGAAGAGAAAGATACGTTAGGCGTAGGCCAAGCGCAGGTTCGTTCCC TCCAATCGGTACCGCGACAGCCGGCCTTTGCCGTAGCTGCTTACAGCGCTTTGCTCCTCGCCGGTCTGCTGGCCTACGGT GCCGACCGCACTGACGATTACGAGCCGTTACCCAAATGGAGGCGCGGCGCCAAACGTCCCTCCTGTTTGGATTTGCTCAC CGTTTTGCGCACAGAAATGGCGGAAAACCCCGATCTGCTGCAGCCTTTTGGCATCCATCCTGATTGGATCAGCCTCGGAA AGACTGCGGCTGCCTAG
Upstream 100 bases:
>100_bases AAGCTATTTGCGAGGCCAATCACGCTTTTTTGCGCCCGGAGGAATAGGCTCTTTTTTTGGCGCCTCTACGTTTCATTTCA TAGTGAAACACAGGAGGCCT
Downstream 100 bases:
>100_bases AAAAATGTCCAAAGTCCAGAGCCGCCTGAAAGGCGGCTGCAGCCAGGATTGGCTGCCCCACAAGGGGCGGTGAGCCGCAA ATTGAAGGCTCCGGTGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MLLRAWLDITAGWLPAFPQQRSLRRAVRLALGTLCAFGRRTLSRAICAVGLQHVDWSAEYLLFARCRWYIDDLFQPILQK GLPFCSDAYVAVAMDDTRLHKTGRKIQSAFYQRDPLSPKFRVNLMFGLRFLQMSLLVPLYRGQQQSARALPVRFVEVPAV KKPGKKASPEEKLAWKQKTKELNLSTRSVEVARTLRTSLDAAGAADRILLLVGDNSFCNRTHFRAEWDRTELIVRARRDL KLCRRAPLGGPRFYDSTKFTPLDVYQDQSIVWKKAKIFHGGRWRMLRYKDVTNVFWQTGAGQKPLRLLVVAPIPYHVGGS KRRSHRDPAFLLTTDLPAPAGHLLQPYFDRWQIEVNHREEKDTLGVGQAQVRSLQSVPRQPAFAVAAYSALLLAGLLAYG ADRTDDYEPLPKWRRGAKRPSCLDLLTVLRTEMAENPDLLQPFGIHPDWISLGKTAAA
Sequences:
>Translated_458_residues MLLRAWLDITAGWLPAFPQQRSLRRAVRLALGTLCAFGRRTLSRAICAVGLQHVDWSAEYLLFARCRWYIDDLFQPILQK GLPFCSDAYVAVAMDDTRLHKTGRKIQSAFYQRDPLSPKFRVNLMFGLRFLQMSLLVPLYRGQQQSARALPVRFVEVPAV KKPGKKASPEEKLAWKQKTKELNLSTRSVEVARTLRTSLDAAGAADRILLLVGDNSFCNRTHFRAEWDRTELIVRARRDL KLCRRAPLGGPRFYDSTKFTPLDVYQDQSIVWKKAKIFHGGRWRMLRYKDVTNVFWQTGAGQKPLRLLVVAPIPYHVGGS KRRSHRDPAFLLTTDLPAPAGHLLQPYFDRWQIEVNHREEKDTLGVGQAQVRSLQSVPRQPAFAVAAYSALLLAGLLAYG ADRTDDYEPLPKWRRGAKRPSCLDLLTVLRTEMAENPDLLQPFGIHPDWISLGKTAAA >Mature_458_residues MLLRAWLDITAGWLPAFPQQRSLRRAVRLALGTLCAFGRRTLSRAICAVGLQHVDWSAEYLLFARCRWYIDDLFQPILQK GLPFCSDAYVAVAMDDTRLHKTGRKIQSAFYQRDPLSPKFRVNLMFGLRFLQMSLLVPLYRGQQQSARALPVRFVEVPAV KKPGKKASPEEKLAWKQKTKELNLSTRSVEVARTLRTSLDAAGAADRILLLVGDNSFCNRTHFRAEWDRTELIVRARRDL KLCRRAPLGGPRFYDSTKFTPLDVYQDQSIVWKKAKIFHGGRWRMLRYKDVTNVFWQTGAGQKPLRLLVVAPIPYHVGGS KRRSHRDPAFLLTTDLPAPAGHLLQPYFDRWQIEVNHREEKDTLGVGQAQVRSLQSVPRQPAFAVAAYSALLLAGLLAYG ADRTDDYEPLPKWRRGAKRPSCLDLLTVLRTEMAENPDLLQPFGIHPDWISLGKTAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52126; Mature: 52126
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRAWLDITAGWLPAFPQQRSLRRAVRLALGTLCAFGRRTLSRAICAVGLQHVDWSAEY CCEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LLFARCRWYIDDLFQPILQKGLPFCSDAYVAVAMDDTRLHKTGRKIQSAFYQRDPLSPKF HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCE RVNLMFGLRFLQMSLLVPLYRGQQQSARALPVRFVEVPAVKKPGKKASPEEKLAWKQKTK EEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH ELNLSTRSVEVARTLRTSLDAAGAADRILLLVGDNSFCNRTHFRAEWDRTELIVRARRDL HCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH KLCRRAPLGGPRFYDSTKFTPLDVYQDQSIVWKKAKIFHGGRWRMLRYKDVTNVFWQTGA HHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHEEECCCEEEEEEHHHHHHHHCCCC GQKPLRLLVVAPIPYHVGGSKRRSHRDPAFLLTTDLPAPAGHLLQPYFDRWQIEVNHREE CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCEEEEECCCCC KDTLGVGQAQVRSLQSVPRQPAFAVAAYSALLLAGLLAYGADRTDDYEPLPKWRRGAKRP CHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC SCLDLLTVLRTEMAENPDLLQPFGIHPDWISLGKTAAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MLLRAWLDITAGWLPAFPQQRSLRRAVRLALGTLCAFGRRTLSRAICAVGLQHVDWSAEY CCEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LLFARCRWYIDDLFQPILQKGLPFCSDAYVAVAMDDTRLHKTGRKIQSAFYQRDPLSPKF HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCE RVNLMFGLRFLQMSLLVPLYRGQQQSARALPVRFVEVPAVKKPGKKASPEEKLAWKQKTK EEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH ELNLSTRSVEVARTLRTSLDAAGAADRILLLVGDNSFCNRTHFRAEWDRTELIVRARRDL HCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH KLCRRAPLGGPRFYDSTKFTPLDVYQDQSIVWKKAKIFHGGRWRMLRYKDVTNVFWQTGA HHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHEEECCCEEEEEEHHHHHHHHCCCC GQKPLRLLVVAPIPYHVGGSKRRSHRDPAFLLTTDLPAPAGHLLQPYFDRWQIEVNHREE CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCEEEEECCCCC KDTLGVGQAQVRSLQSVPRQPAFAVAAYSALLLAGLLAYGADRTDDYEPLPKWRRGAKRP CHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCC SCLDLLTVLRTEMAENPDLLQPFGIHPDWISLGKTAAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA