| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622759
Identifier: 116622759
GI number: 116622759
Start: 4640942
End: 4642525
Strand: Direct
Name: 116622759
Synonym: Acid_3658
Alternate gene names: NA
Gene position: 4640942-4642525 (Clockwise)
Preceding gene: 116622757
Following gene: 116622761
Centisome position: 46.57
GC content: 57.07
Gene sequence:
>1584_bases ATGAATAAAGCTAAACGATGCGTCCCGCTATTATTTGGTTTGGCTTCGATGCTGGTCGTTACGAATTCTGCTTTCGCCGA TGACCACAAGATACGTCGTGTGATGATGATCAGCATAGACGGAATGCACGCCCTGGATATGGCGCTGTGGATAAAGAACC ATCCTACTTCAGCCCTCGGAAAATTGTCCGCCCAGGCACTCAACTACACCAACGCCAGCACCACCAAGCCGTCCGATTCG ATTCCATCCACCGTCGGCATTTTTACCGGTGGCTCGGCCGCTATCGGCGGCATGTACTACGACGATGCCTATAACCGTGC GTGGTTTTCGCCAACTAACTTGACTTGTACCGGGACTCCCGGCGCTGTGATCGATCTTAAGTTTGCCATCAACCTCAATC CGGATGGCACGGGCGGTGTAGATTCGGCCAAGATGCCTCGTCAACTGGTCAATGGAGTCTGCGCTCCGGTGCTTCCGCAC AATATGATGCGCCTGAATACGGTCTTCGAAATTGTTCGGTCCACTCTAGGACCGACGGCTTACTCTGAAAAGCGTCCCTC TTACGAGTTCCTGAACGGACCCAGCGGCACGGGCGTCACAGACCTCTATACTCCGGAAATCAACTGCCAGCCGCATTACA CGCTTCCGCCTCCTGCCGCGCCCACGGGAACCTGCGCAAACGCCCTGCTCTCGTTGATCGACACCGAAGCCTTCGACGAT CTGCGCGTGCAGAGCGTCATCAACGAAATCGATGGAAAAGATCATACCGGCACTTTGAGTGCCGCTGTCCCTGTGCTCTT CGGCATGAACTTCCAGGCACTCAATGCTGCCAAGAAGGATTCGCTGGGCGGCGGCTACGCCGATGATCTCGGAACCCCCA ACCCGGCACTGGCGGACGCGTTGGCACATACCGATGCATCCATCGGCCGCATCGTGACCGAATTGACCAACCAGGGCCTC ATCGGCACCACCGCGATCATTATTACCGCCAAGCATGGCGAGTCGTCGCTTGACCCCAGCAAACGCGTCATCGATACCAA CAGCGCGATTCAGAACGTGCTCACACCCGCTGGTTTCCCGCCCGCCTCGATCGCCAAGCTGACCGAAAAGACATCAGCAC TCATCTGGCTGGCAAACCAGGCCAATACCCAGGGCGTGGCTGCGGTTCTGACCACCAAAGCCAACGAATCCACCCTGAAC ATCGCACAGATCTTGAGCGGAGAGTCGCTGAAACTGCTGTTCCCGGACCCCCTGATCGATCCGGCCTCACCGGATGTCGT CGTCGTTCCCAACCTCGGAGTCAACTTCGAGCCCACGCTGAACACTGCTCTGCCGGCGGTGCAAGCGGAGCACGGCGGGC TCAATGAGAACGAAACGCACGTGCCGCTTATGATCGTCGGCGGGTCTATCAACGGAACTCCAATTTCCTCGGGCATCATC CGTGCCGCAGTGAGCACAACCCAGATCGCGCCGACCATTCTAGAGCTTCTGAATTTGGATCCGAACGCGCTTCAGGCGGT GCGTCTTGAAAACGTCGGTGTGCTTGCCGGCATCAAATCGGATAACGGTAAGAGCGCTCATTAG
Upstream 100 bases:
>100_bases GAAAGCACCCATAGTGTCTGGGCATATTTGTCTGGCCCGGATATCTTCGGCGAGCGAAGTTTCTTCAGAGCTGCGAATGG TAAGGAAAAGGACATAACAC
Downstream 100 bases:
>100_bases CGGTGGTGACCGCGCGATGGCAAATGCGCGGCGCAAGCCGGGCATTTGCCATATCTCCATGCCGAACTGGCGGCACATAC GTCAGCCGGAAAATCGACTC
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MNKAKRCVPLLFGLASMLVVTNSAFADDHKIRRVMMISIDGMHALDMALWIKNHPTSALGKLSAQALNYTNASTTKPSDS IPSTVGIFTGGSAAIGGMYYDDAYNRAWFSPTNLTCTGTPGAVIDLKFAINLNPDGTGGVDSAKMPRQLVNGVCAPVLPH NMMRLNTVFEIVRSTLGPTAYSEKRPSYEFLNGPSGTGVTDLYTPEINCQPHYTLPPPAAPTGTCANALLSLIDTEAFDD LRVQSVINEIDGKDHTGTLSAAVPVLFGMNFQALNAAKKDSLGGGYADDLGTPNPALADALAHTDASIGRIVTELTNQGL IGTTAIIITAKHGESSLDPSKRVIDTNSAIQNVLTPAGFPPASIAKLTEKTSALIWLANQANTQGVAAVLTTKANESTLN IAQILSGESLKLLFPDPLIDPASPDVVVVPNLGVNFEPTLNTALPAVQAEHGGLNENETHVPLMIVGGSINGTPISSGII RAAVSTTQIAPTILELLNLDPNALQAVRLENVGVLAGIKSDNGKSAH
Sequences:
>Translated_527_residues MNKAKRCVPLLFGLASMLVVTNSAFADDHKIRRVMMISIDGMHALDMALWIKNHPTSALGKLSAQALNYTNASTTKPSDS IPSTVGIFTGGSAAIGGMYYDDAYNRAWFSPTNLTCTGTPGAVIDLKFAINLNPDGTGGVDSAKMPRQLVNGVCAPVLPH NMMRLNTVFEIVRSTLGPTAYSEKRPSYEFLNGPSGTGVTDLYTPEINCQPHYTLPPPAAPTGTCANALLSLIDTEAFDD LRVQSVINEIDGKDHTGTLSAAVPVLFGMNFQALNAAKKDSLGGGYADDLGTPNPALADALAHTDASIGRIVTELTNQGL IGTTAIIITAKHGESSLDPSKRVIDTNSAIQNVLTPAGFPPASIAKLTEKTSALIWLANQANTQGVAAVLTTKANESTLN IAQILSGESLKLLFPDPLIDPASPDVVVVPNLGVNFEPTLNTALPAVQAEHGGLNENETHVPLMIVGGSINGTPISSGII RAAVSTTQIAPTILELLNLDPNALQAVRLENVGVLAGIKSDNGKSAH >Mature_527_residues MNKAKRCVPLLFGLASMLVVTNSAFADDHKIRRVMMISIDGMHALDMALWIKNHPTSALGKLSAQALNYTNASTTKPSDS IPSTVGIFTGGSAAIGGMYYDDAYNRAWFSPTNLTCTGTPGAVIDLKFAINLNPDGTGGVDSAKMPRQLVNGVCAPVLPH NMMRLNTVFEIVRSTLGPTAYSEKRPSYEFLNGPSGTGVTDLYTPEINCQPHYTLPPPAAPTGTCANALLSLIDTEAFDD LRVQSVINEIDGKDHTGTLSAAVPVLFGMNFQALNAAKKDSLGGGYADDLGTPNPALADALAHTDASIGRIVTELTNQGL IGTTAIIITAKHGESSLDPSKRVIDTNSAIQNVLTPAGFPPASIAKLTEKTSALIWLANQANTQGVAAVLTTKANESTLN IAQILSGESLKLLFPDPLIDPASPDVVVVPNLGVNFEPTLNTALPAVQAEHGGLNENETHVPLMIVGGSINGTPISSGII RAAVSTTQIAPTILELLNLDPNALQAVRLENVGVLAGIKSDNGKSAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55123; Mature: 55123
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKAKRCVPLLFGLASMLVVTNSAFADDHKIRRVMMISIDGMHALDMALWIKNHPTSALG CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCHHHHHEEEECCCCCHHHH KLSAQALNYTNASTTKPSDSIPSTVGIFTGGSAAIGGMYYDDAYNRAWFSPTNLTCTGTP HHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHCCCEEECCCCCCCCCCCCCEEECCCC GAVIDLKFAINLNPDGTGGVDSAKMPRQLVNGVCAPVLPHNMMRLNTVFEIVRSTLGPTA CEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCC YSEKRPSYEFLNGPSGTGVTDLYTPEINCQPHYTLPPPAAPTGTCANALLSLIDTEAFDD CCCCCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LRVQSVINEIDGKDHTGTLSAAVPVLFGMNFQALNAAKKDSLGGGYADDLGTPNPALADA HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHCCHHHCCCCCCCCCCCCCCCHHHHHH LAHTDASIGRIVTELTNQGLIGTTAIIITAKHGESSLDPSKRVIDTNSAIQNVLTPAGFP HHHCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHEEECHHHHHHHHCCCCCC PASIAKLTEKTSALIWLANQANTQGVAAVLTTKANESTLNIAQILSGESLKLLFPDPLID HHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCCC PASPDVVVVPNLGVNFEPTLNTALPAVQAEHGGLNENETHVPLMIVGGSINGTPISSGII CCCCCEEEECCCCCCCCCCHHHHCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH RAAVSTTQIAPTILELLNLDPNALQAVRLENVGVLAGIKSDNGKSAH HHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCEEEEEEECCCCCCCC >Mature Secondary Structure MNKAKRCVPLLFGLASMLVVTNSAFADDHKIRRVMMISIDGMHALDMALWIKNHPTSALG CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCHHHHHEEEECCCCCHHHH KLSAQALNYTNASTTKPSDSIPSTVGIFTGGSAAIGGMYYDDAYNRAWFSPTNLTCTGTP HHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHCCCEEECCCCCCCCCCCCCEEECCCC GAVIDLKFAINLNPDGTGGVDSAKMPRQLVNGVCAPVLPHNMMRLNTVFEIVRSTLGPTA CEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCC YSEKRPSYEFLNGPSGTGVTDLYTPEINCQPHYTLPPPAAPTGTCANALLSLIDTEAFDD CCCCCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LRVQSVINEIDGKDHTGTLSAAVPVLFGMNFQALNAAKKDSLGGGYADDLGTPNPALADA HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHCCHHHCCCCCCCCCCCCCCCHHHHHH LAHTDASIGRIVTELTNQGLIGTTAIIITAKHGESSLDPSKRVIDTNSAIQNVLTPAGFP HHHCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHEEECHHHHHHHHCCCCCC PASIAKLTEKTSALIWLANQANTQGVAAVLTTKANESTLNIAQILSGESLKLLFPDPLID HHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCCC PASPDVVVVPNLGVNFEPTLNTALPAVQAEHGGLNENETHVPLMIVGGSINGTPISSGII CCCCCEEEECCCCCCCCCCHHHHCCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH RAAVSTTQIAPTILELLNLDPNALQAVRLENVGVLAGIKSDNGKSAH HHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA