| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622733
Identifier: 116622733
GI number: 116622733
Start: 4599453
End: 4600550
Strand: Reverse
Name: 116622733
Synonym: Acid_3632
Alternate gene names: NA
Gene position: 4600550-4599453 (Counterclockwise)
Preceding gene: 116622734
Following gene: 116622731
Centisome position: 46.16
GC content: 62.2
Gene sequence:
>1098_bases TTGCGAAGATTGCTATTCAACGTTCATCTCTACCTTGCCCTCATCGCCGGCGTTTTCGTAGTCATCCTGGGACTTACCGG CGCCATCATGGCATTCGAACCGGAGCTCGACCATGTGCTGCACGCGAAGCTCTCTTATGTGACTCCGCGGCAGCATCGCC TCTCGCTCGCGCAACTCAGCGCCGCGGTGCAGCAAGTATTCCCCGGCGAGCGGATCGGCGGCTACCTGCTTTCGAATTCA CCCGATATTGCGGCGGGAGTCTCCACGAAGCGCGGCGTGGTGGCGGTCGATCCATACACCGGCGCGGTGCTGGGCGTGCG CCAAGGGGGTCAGGATTTTCTCGGCTGGGTGCATCAGCTCCACTTGCGGCTCACGATCCGCAATAAGGCCGACACTGGCA AGGATATCGTGAAGTGGGCCGGGATCGCGATGATGATCCTGTTGCTCTCGGGCATTTATCTCTGGTGGCCGGTCAAGCGG ATCTCGATCGAAACCGGCGCGCGCGGACGGCGCTTTTGGTTCGACGTTCACAATGCGATCGGTATCTTTTCGCTCGTCTT CCTGCTGACCTTGACCTTCACGGGGCTGATGATCGGGTTCGAAGAATCCACCGTGCCAATGTTTTACCGCCTGACCGGGA GCGAGGCCTCCAAAGCTCCTCCGCTGCCGCCACCGCCGCCCGGCGCGAAGCCGATCACGCCCGATCAGGCGATGCAAATC GCCGCCGCCGCCATCCCCGGCACATTTCCCTTCCAGATCGTCATGCCGGGTCCGAAGGGTGCCTACCAGATCCGCTCGCG ATTTCCCGAGGACTTAACTCCCGGTGGGCGCAGCCGCGTGATCGTGGATCAGTACACCGGCAACGTACTCTACGCCGAAG GCTCGCGCACCGCGCCCGCGGGCACGCGCATGGTGATCGTCAACCGCGCCATCCACACGGGCGACATCTTCGGAATCCCA AGCAAGACGCTGATGTCGTTGGCCTCCCTGATGGCCGTGATCCAGGTGTTTAGCGGCGCGCTCATGTGGTGGAAGCGCAC GCGCGCGATGAGCAAAGTAAAGGCTAATACAGCAGGTAGCGGGCGCGGACCTGGGTGA
Upstream 100 bases:
>100_bases ATCCCGGCGACGCCGATGAACTGAGCCAGGCACTTTGGGGTAAGATGATGCGGTCGCTGGGCGGCGGCATCTATCGCCCG GACCGATAAGGAGTGGCCGC
Downstream 100 bases:
>100_bases AGGCCTCCAGGGCATCGGCGTAAGACTCCTGGATGGTGCGCGGGTCTTCGCCGGCCCGGATTCGCTGGATCACATCGTCG TTGCCGATCAATCGCTTTCC
Product: peptidase
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Family; PepSY-Associated TM Helix; Peptidase; Flavodoxin/Nitric Oxide Synthase; Sulfite Reductase; Sulfite Reductase Flavoprotein Component; PepSY-Associated Membrane Protein; Transmembrane Protein; Integral Membrane Protein; Iron-Uptake Factor; NB-Dependent Receptor Plug; Oxidoreductase; Sulfite Reductase Flavoprotein Alpha-Component; PepSY Amd Peptidase M4 Protein; Cytoplasmic Membrane Protein; Bifunctional Protein Flavoprotein Alpha-Component; Bifunctional Sulfite Reductase; Protein Containing PepSY-Associated TM Helix; Pepsy-Associated Tm Helix Domain Protein; Sulfite Reductase/Membrane Protein; Iron-Regulated Transmembrane Protein
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MRRLLFNVHLYLALIAGVFVVILGLTGAIMAFEPELDHVLHAKLSYVTPRQHRLSLAQLSAAVQQVFPGERIGGYLLSNS PDIAAGVSTKRGVVAVDPYTGAVLGVRQGGQDFLGWVHQLHLRLTIRNKADTGKDIVKWAGIAMMILLLSGIYLWWPVKR ISIETGARGRRFWFDVHNAIGIFSLVFLLTLTFTGLMIGFEESTVPMFYRLTGSEASKAPPLPPPPPGAKPITPDQAMQI AAAAIPGTFPFQIVMPGPKGAYQIRSRFPEDLTPGGRSRVIVDQYTGNVLYAEGSRTAPAGTRMVIVNRAIHTGDIFGIP SKTLMSLASLMAVIQVFSGALMWWKRTRAMSKVKANTAGSGRGPG
Sequences:
>Translated_365_residues MRRLLFNVHLYLALIAGVFVVILGLTGAIMAFEPELDHVLHAKLSYVTPRQHRLSLAQLSAAVQQVFPGERIGGYLLSNS PDIAAGVSTKRGVVAVDPYTGAVLGVRQGGQDFLGWVHQLHLRLTIRNKADTGKDIVKWAGIAMMILLLSGIYLWWPVKR ISIETGARGRRFWFDVHNAIGIFSLVFLLTLTFTGLMIGFEESTVPMFYRLTGSEASKAPPLPPPPPGAKPITPDQAMQI AAAAIPGTFPFQIVMPGPKGAYQIRSRFPEDLTPGGRSRVIVDQYTGNVLYAEGSRTAPAGTRMVIVNRAIHTGDIFGIP SKTLMSLASLMAVIQVFSGALMWWKRTRAMSKVKANTAGSGRGPG >Mature_365_residues MRRLLFNVHLYLALIAGVFVVILGLTGAIMAFEPELDHVLHAKLSYVTPRQHRLSLAQLSAAVQQVFPGERIGGYLLSNS PDIAAGVSTKRGVVAVDPYTGAVLGVRQGGQDFLGWVHQLHLRLTIRNKADTGKDIVKWAGIAMMILLLSGIYLWWPVKR ISIETGARGRRFWFDVHNAIGIFSLVFLLTLTFTGLMIGFEESTVPMFYRLTGSEASKAPPLPPPPPGAKPITPDQAMQI AAAAIPGTFPFQIVMPGPKGAYQIRSRFPEDLTPGGRSRVIVDQYTGNVLYAEGSRTAPAGTRMVIVNRAIHTGDIFGIP SKTLMSLASLMAVIQVFSGALMWWKRTRAMSKVKANTAGSGRGPG
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39614; Mature: 39614
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLFNVHLYLALIAGVFVVILGLTGAIMAFEPELDHVLHAKLSYVTPRQHRLSLAQLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHH AAVQQVFPGERIGGYLLSNSPDIAAGVSTKRGVVAVDPYTGAVLGVRQGGQDFLGWVHQL HHHHHHCCCCHHCCEEECCCCCCEECCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHE HLRLTIRNKADTGKDIVKWAGIAMMILLLSGIYLWWPVKRISIETGARGRRFWFDVHNAI EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHEECEEEEEEECCCCCCEEEEEHHHHH GIFSLVFLLTLTFTGLMIGFEESTVPMFYRLTGSEASKAPPLPPPPPGAKPITPDQAMQI HHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH AAAAIPGTFPFQIVMPGPKGAYQIRSRFPEDLTPGGRSRVIVDQYTGNVLYAEGSRTAPA HHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCC GTRMVIVNRAIHTGDIFGIPSKTLMSLASLMAVIQVFSGALMWWKRTRAMSKVKANTAGS CCEEEEEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GRGPG CCCCC >Mature Secondary Structure MRRLLFNVHLYLALIAGVFVVILGLTGAIMAFEPELDHVLHAKLSYVTPRQHRLSLAQLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHH AAVQQVFPGERIGGYLLSNSPDIAAGVSTKRGVVAVDPYTGAVLGVRQGGQDFLGWVHQL HHHHHHCCCCHHCCEEECCCCCCEECCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHE HLRLTIRNKADTGKDIVKWAGIAMMILLLSGIYLWWPVKRISIETGARGRRFWFDVHNAI EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHEECEEEEEEECCCCCCEEEEEHHHHH GIFSLVFLLTLTFTGLMIGFEESTVPMFYRLTGSEASKAPPLPPPPPGAKPITPDQAMQI HHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH AAAAIPGTFPFQIVMPGPKGAYQIRSRFPEDLTPGGRSRVIVDQYTGNVLYAEGSRTAPA HHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCC GTRMVIVNRAIHTGDIFGIPSKTLMSLASLMAVIQVFSGALMWWKRTRAMSKVKANTAGS CCEEEEEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GRGPG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA