| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622718
Identifier: 116622718
GI number: 116622718
Start: 4576388
End: 4577098
Strand: Reverse
Name: 116622718
Synonym: Acid_3617
Alternate gene names: NA
Gene position: 4577098-4576388 (Counterclockwise)
Preceding gene: 116622721
Following gene: 116622717
Centisome position: 45.93
GC content: 61.46
Gene sequence:
>711_bases ATGACAGCCAGATATCTGCCGGCGCTAGCGGCATTGCTCGGACTCACCGGATGTGTGATGGAGAGAGATCCCGGCGGCCC CGCCCAGTACTTCTCCCAAAGCGTGGAACCCGACAATTCCGAAGAGGTGCGCGTAGACCTTCGGATGGGGGCCGGCGACC TTCAGGTCACGGACGGCGCACAAAAGCTGGTACGCGCCGATTTCACGTACAACATCCCCGCATGGAAGCCCGAGGTGAAG TACACCCGCGAAGGCAATCGCGGAACCCTGACCATCGTTCAACCTGGAAGCTCCCACACCACCGTCATGGGCAAAACTCA ATACCGCTGGGATCTTCAGTTGAACAATAAGGTGCCCATGGACTTGAACGTGAACTTCGGCGCAGGCAAGGCCCGGCTGG ATTTGGGAAGCCTGATGCTGCGCGGCGTCGAGTTGAACATGGGGGTCGGACAAATGGAGATGGACCTGCGCGGCAAGGTC CGCCATAGCTACAACGTGAGCATCCACGGCGGCGTCGGCGAGGCCACCATACGCCTACCCGTCGATGCCGGGATCTACGC CGAGGCCCACGGAGGCATCGGCAGCATCAACGTGCGCGGCCTGCGCCACGAAGGCGGCCATTGGGTCAGCGACTCGTACG AGCAGGCCGAGAACAAGATCAGGATCGACGTGGAGGGTGGCATCGGCGCCATCAAACTGATCGCCGATTGA
Upstream 100 bases:
>100_bases ACCCTGGATACTGCACGGTGGACGCCAGTGTCCGTAAGGGCACTTTGCACAAACCGGAACAACTCCGCCGCCCTTGACGT ACATCCTGGTTGGAGATTTC
Downstream 100 bases:
>100_bases CCCAACCTCTGTCAGTTTTCTACGGTGCGGGCGGGACCCTGCCGCGATGCGGGCCGCATCCAGTCCAGTGACGATCCGCC CCGAATCGGCCGCGATTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTARYLPALAALLGLTGCVMERDPGGPAQYFSQSVEPDNSEEVRVDLRMGAGDLQVTDGAQKLVRADFTYNIPAWKPEVK YTREGNRGTLTIVQPGSSHTTVMGKTQYRWDLQLNNKVPMDLNVNFGAGKARLDLGSLMLRGVELNMGVGQMEMDLRGKV RHSYNVSIHGGVGEATIRLPVDAGIYAEAHGGIGSINVRGLRHEGGHWVSDSYEQAENKIRIDVEGGIGAIKLIAD
Sequences:
>Translated_236_residues MTARYLPALAALLGLTGCVMERDPGGPAQYFSQSVEPDNSEEVRVDLRMGAGDLQVTDGAQKLVRADFTYNIPAWKPEVK YTREGNRGTLTIVQPGSSHTTVMGKTQYRWDLQLNNKVPMDLNVNFGAGKARLDLGSLMLRGVELNMGVGQMEMDLRGKV RHSYNVSIHGGVGEATIRLPVDAGIYAEAHGGIGSINVRGLRHEGGHWVSDSYEQAENKIRIDVEGGIGAIKLIAD >Mature_235_residues TARYLPALAALLGLTGCVMERDPGGPAQYFSQSVEPDNSEEVRVDLRMGAGDLQVTDGAQKLVRADFTYNIPAWKPEVKY TREGNRGTLTIVQPGSSHTTVMGKTQYRWDLQLNNKVPMDLNVNFGAGKARLDLGSLMLRGVELNMGVGQMEMDLRGKVR HSYNVSIHGGVGEATIRLPVDAGIYAEAHGGIGSINVRGLRHEGGHWVSDSYEQAENKIRIDVEGGIGAIKLIAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25619; Mature: 25488
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARYLPALAALLGLTGCVMERDPGGPAQYFSQSVEPDNSEEVRVDLRMGAGDLQVTDGA CCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCCCCCCEEEEEEEECCCCEEEECCH QKLVRADFTYNIPAWKPEVKYTREGNRGTLTIVQPGSSHTTVMGKTQYRWDLQLNNKVPM HHHEEECEEECCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCEEEEEEEECCCCCE DLNVNFGAGKARLDLGSLMLRGVELNMGVGQMEMDLRGKVRHSYNVSIHGGVGEATIRLP EEEEECCCCCEEEEHHHHEEEEEEEECCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEE VDAGIYAEAHGGIGSINVRGLRHEGGHWVSDSYEQAENKIRIDVEGGIGAIKLIAD ECCCEEEECCCCCCEEEEEEEEECCCCCCCCCHHCCCCEEEEEECCCCEEEEEEEC >Mature Secondary Structure TARYLPALAALLGLTGCVMERDPGGPAQYFSQSVEPDNSEEVRVDLRMGAGDLQVTDGA CCHHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCCCCCCEEEEEEEECCCCEEEECCH QKLVRADFTYNIPAWKPEVKYTREGNRGTLTIVQPGSSHTTVMGKTQYRWDLQLNNKVPM HHHEEECEEECCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCEEEEEEEECCCCCE DLNVNFGAGKARLDLGSLMLRGVELNMGVGQMEMDLRGKVRHSYNVSIHGGVGEATIRLP EEEEECCCCCEEEEHHHHEEEEEEEECCCCEEEECCCCEEEEEEEEEEECCCCCEEEEEE VDAGIYAEAHGGIGSINVRGLRHEGGHWVSDSYEQAENKIRIDVEGGIGAIKLIAD ECCCEEEECCCCCCEEEEEEEEECCCCCCCCCHHCCCCEEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA