| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB1 [H]
Identifier: 116622707
GI number: 116622707
Start: 4565090
End: 4567633
Strand: Reverse
Name: macB1 [H]
Synonym: Acid_3606
Alternate gene names: 116622707
Gene position: 4567633-4565090 (Counterclockwise)
Preceding gene: 116622708
Following gene: 116622705
Centisome position: 45.83
GC content: 66.04
Gene sequence:
>2544_bases ATGACAAGCCTCCGCCGCCTCTTCCTCAAACTCCTGCGCCGCCGCGCTCTCCAGCAGGATCTCGACGCCGAACTCGCCTT CCACCGCGAAATGGCGACCGCTGCCGGCAACCCAATCCCCCTGGGCAACTCAACCTTCCTCAAGGAACAGGCCTTCGATC TATGGCGCTTCAACGCCCTGGAGAATTTCTCGCGCGACCTGATCTACGCCGTCCGCGCCCTGCGCAAAAGCCCTGACTTC GTCCTCACCGCGCTCCTCTCGCTCGGACTCGGCATCGGTCTCAATACCGCGATGTTCTCTCTCGCTGTCGAGTTCCTTCT CAGCGAACCCTCCGTCCGCGACGCCTCCTCGCTGGTCTACATCCGCCAGGGCGGCAACAGCCACGTCCAACCCGAGGTCA TCGAGTATTTGCGCCGCAGCGGGGTCTTCGAAGACGTCGTCGGCGAAAACGAAGAGAGCTTCATCAATTTCAACAACGGC GCCGAAACCCGCCGCATCTTCGCCCTCCAGGCCACACCGAACTTCTTCACTGCCTTCGGAGTACCGGTTGCCCAGGGTCG GGGATGGAATGAATCCGATAGCCGCGATGTCGTCGTCCTCCATCCCCACTTCTGGCGTACCCGCCTCGCCGCCGATCCCG CCATCATCGGCAAGGCCATCCATCTCGATGGCCGCCTTTACACCGTCCTCGGCATCCTCCCCGCCAACTACCGCAGCATC ATCGGCTATGGCTACTCGCCCGACGTCTTCGTCCCCCGCTACATCGAGGGCACCATCCTCGCCGCCTACGCGCGTATGAA GCCCGGCATGACCCTCGGCCAGCTTAACGCCGCACTTCCCGCCGTCAGCCAGCGCCTGAGTCGCGAACACCCCTCCAAAT ACGAGTCTGACAACCACCTCTCGGCCACGCCCGTCTCCGGCATCGCGCGTCTGCAAAAGGAAAAACAGGCGCTCGCCGTC AGCCTCTTCTTCGTCATCCTCCTCGTGATCGTCGGCCTCGTTCTGCTGATCGCCTGCGTCAACGTCGCCGGCTTGCTCCT CGCCCGCGCCTCCATCCGCCGCCAGGAAATCGCCATCCGCCTCGCCCTCGGCGCTACCCGCGTACGCCTCCTCCAACAGC TTCTGGCCGAAAGCCTGCTGCTCTCTGTTGCCGGCGCTGCCTTCGGTTTCGTCATCGCCCTCGTCGCCGCCAAAGCCGCC GCCGCAACTCCCCTTCCCTTCCCTGTCCCCATCCGCCTCCACATTGACCCCGATTGGCGCGTCGCCTCGTACGCCGCCCT CCTCGCCATCTTCTCCGCCCTCGCCAGCGGACTCATGCCCGCCTGGCAGGCCCTCCGTGAATCGCTCTCCGCGGGCATGT ACCGCGAACGCAAACTGCGCACGCGCCGCGTGCTCGTCGTGGCCCAGATCGCCGTCTCGTTCATAGTCCTGACCACCGCC GCCCTCTTCCTTCAAAACCTGGTGCGCACCAGTTCCCTGGGCCCTGGCTTCGACATTCGCCACACGGTCCGCGCCGAGGT CTACCTCCCGCCCGCCGCCTACAAAGAGAGCCGCTCCATCAATGCCTATGTCGATCGCGCCCTCGAGCAGCTCCGCGCCG TCCCCGGCGTCGAATCGGCCGCCGCCGCGCGCATCATTCCCTTCACCGACGCCACAAACTTCGGCACCACCCTCACCTTC CCCGACACCGGCGCCAAGCCGCACGCCGCGTTCAACTGGAACGCCGTCACGCCCGATTACTTCCGCGCGATGGAGATCCC CATCCTCTCCGGCCGCGCCTTCCTCCCCCAGGACAAAGGCGGCGCCCGCGTCGTCATCGTCAACCAGGAATTCGTCCGCC GCTACCTCGGTTCGCGCCAACCCATCGGCGCCACCTTCCTTTGGTCCGAAGACAAGTCGCTCTACCAGATCGTCGGCGTC GTGCCAGGCACCAAGAACATGACCATCGGCGAAGACCCGCGCGCCCAGCTCTACGAACCCCTCGCACAAATCAAGAACGA CCGCCCCAGAATTCAATTCGTCACCCGCTCCGCGACCCCTTCCGCCGCGCAACTCGCCGCCGTCCGGCAGGCCCTCCGCC AGGCCGAGCCCGCCGCCGGACTCGAAGTCGAAACCATGTTCTCCGCCATCGGCTTCGCCTTCCTACCCTCCCAAGTCGGC GCCGTCCTGATGGGCAGCATCGGCGCCCTTGGCCTCCTCCTCGCCGTCATCGGACTTTATGGCGTCCTCTCCTTCGGCGT CGCCCGCCGCACCCGCGAAATCGGCATCCGCATCGCCATCGGCGCTGGGCCCCGCGATGTCTCCGGCATGGTCCTCCGCG AGTTCGCCCGCCTCCTGGTCACCGGCATCGCCATCGGCCTCGCCGTCGCCCTCTTCGTGACCCGTCCACTCTCCATGTTC TTTGTCCCCGGCCTCAGCCCAAACGACCCCCTGACGTTGGCCGCCGTGATCCTCGCCCTAGCCCTCACCGGAGTCCTCGC CGCCCTTGGCCCCGTCCGCCGCGCCCTCCGCATCGATCCCCTCCAATGCCTGCGCTACGAGTAA
Upstream 100 bases:
>100_bases ACGAAATCACCAGGCGCGGCCGCAAGCTCATCGCCGATCAGCACCAAGCCTGGGATCGCCTCTCCGCCGCCGTGGACCGC GTGCTCGCGAGGCAGCCCCA
Downstream 100 bases:
>100_bases GTCAGGCCTCCCGGCCTGTCTTACTAATCAGTTCTTTGCCAAAATGAAATCGATGTCCAAAGGTCGCGACAAGAAAAAGC GCGCAGCCAGACGCAACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 847; Mature: 846
Protein sequence:
>847_residues MTSLRRLFLKLLRRRALQQDLDAELAFHREMATAAGNPIPLGNSTFLKEQAFDLWRFNALENFSRDLIYAVRALRKSPDF VLTALLSLGLGIGLNTAMFSLAVEFLLSEPSVRDASSLVYIRQGGNSHVQPEVIEYLRRSGVFEDVVGENEESFINFNNG AETRRIFALQATPNFFTAFGVPVAQGRGWNESDSRDVVVLHPHFWRTRLAADPAIIGKAIHLDGRLYTVLGILPANYRSI IGYGYSPDVFVPRYIEGTILAAYARMKPGMTLGQLNAALPAVSQRLSREHPSKYESDNHLSATPVSGIARLQKEKQALAV SLFFVILLVIVGLVLLIACVNVAGLLLARASIRRQEIAIRLALGATRVRLLQQLLAESLLLSVAGAAFGFVIALVAAKAA AATPLPFPVPIRLHIDPDWRVASYAALLAIFSALASGLMPAWQALRESLSAGMYRERKLRTRRVLVVAQIAVSFIVLTTA ALFLQNLVRTSSLGPGFDIRHTVRAEVYLPPAAYKESRSINAYVDRALEQLRAVPGVESAAAARIIPFTDATNFGTTLTF PDTGAKPHAAFNWNAVTPDYFRAMEIPILSGRAFLPQDKGGARVVIVNQEFVRRYLGSRQPIGATFLWSEDKSLYQIVGV VPGTKNMTIGEDPRAQLYEPLAQIKNDRPRIQFVTRSATPSAAQLAAVRQALRQAEPAAGLEVETMFSAIGFAFLPSQVG AVLMGSIGALGLLLAVIGLYGVLSFGVARRTREIGIRIAIGAGPRDVSGMVLREFARLLVTGIAIGLAVALFVTRPLSMF FVPGLSPNDPLTLAAVILALALTGVLAALGPVRRALRIDPLQCLRYE
Sequences:
>Translated_847_residues MTSLRRLFLKLLRRRALQQDLDAELAFHREMATAAGNPIPLGNSTFLKEQAFDLWRFNALENFSRDLIYAVRALRKSPDF VLTALLSLGLGIGLNTAMFSLAVEFLLSEPSVRDASSLVYIRQGGNSHVQPEVIEYLRRSGVFEDVVGENEESFINFNNG AETRRIFALQATPNFFTAFGVPVAQGRGWNESDSRDVVVLHPHFWRTRLAADPAIIGKAIHLDGRLYTVLGILPANYRSI IGYGYSPDVFVPRYIEGTILAAYARMKPGMTLGQLNAALPAVSQRLSREHPSKYESDNHLSATPVSGIARLQKEKQALAV SLFFVILLVIVGLVLLIACVNVAGLLLARASIRRQEIAIRLALGATRVRLLQQLLAESLLLSVAGAAFGFVIALVAAKAA AATPLPFPVPIRLHIDPDWRVASYAALLAIFSALASGLMPAWQALRESLSAGMYRERKLRTRRVLVVAQIAVSFIVLTTA ALFLQNLVRTSSLGPGFDIRHTVRAEVYLPPAAYKESRSINAYVDRALEQLRAVPGVESAAAARIIPFTDATNFGTTLTF PDTGAKPHAAFNWNAVTPDYFRAMEIPILSGRAFLPQDKGGARVVIVNQEFVRRYLGSRQPIGATFLWSEDKSLYQIVGV VPGTKNMTIGEDPRAQLYEPLAQIKNDRPRIQFVTRSATPSAAQLAAVRQALRQAEPAAGLEVETMFSAIGFAFLPSQVG AVLMGSIGALGLLLAVIGLYGVLSFGVARRTREIGIRIAIGAGPRDVSGMVLREFARLLVTGIAIGLAVALFVTRPLSMF FVPGLSPNDPLTLAAVILALALTGVLAALGPVRRALRIDPLQCLRYE >Mature_846_residues TSLRRLFLKLLRRRALQQDLDAELAFHREMATAAGNPIPLGNSTFLKEQAFDLWRFNALENFSRDLIYAVRALRKSPDFV LTALLSLGLGIGLNTAMFSLAVEFLLSEPSVRDASSLVYIRQGGNSHVQPEVIEYLRRSGVFEDVVGENEESFINFNNGA ETRRIFALQATPNFFTAFGVPVAQGRGWNESDSRDVVVLHPHFWRTRLAADPAIIGKAIHLDGRLYTVLGILPANYRSII GYGYSPDVFVPRYIEGTILAAYARMKPGMTLGQLNAALPAVSQRLSREHPSKYESDNHLSATPVSGIARLQKEKQALAVS LFFVILLVIVGLVLLIACVNVAGLLLARASIRRQEIAIRLALGATRVRLLQQLLAESLLLSVAGAAFGFVIALVAAKAAA ATPLPFPVPIRLHIDPDWRVASYAALLAIFSALASGLMPAWQALRESLSAGMYRERKLRTRRVLVVAQIAVSFIVLTTAA LFLQNLVRTSSLGPGFDIRHTVRAEVYLPPAAYKESRSINAYVDRALEQLRAVPGVESAAAARIIPFTDATNFGTTLTFP DTGAKPHAAFNWNAVTPDYFRAMEIPILSGRAFLPQDKGGARVVIVNQEFVRRYLGSRQPIGATFLWSEDKSLYQIVGVV PGTKNMTIGEDPRAQLYEPLAQIKNDRPRIQFVTRSATPSAAQLAAVRQALRQAEPAAGLEVETMFSAIGFAFLPSQVGA VLMGSIGALGLLLAVIGLYGVLSFGVARRTREIGIRIAIGAGPRDVSGMVLREFARLLVTGIAIGLAVALFVTRPLSMFF VPGLSPNDPLTLAAVILALALTGVLAALGPVRRALRIDPLQCLRYE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=122, Percent_Identity=34.4262295081967, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 92158; Mature: 92027
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLRRLFLKLLRRRALQQDLDAELAFHREMATAAGNPIPLGNSTFLKEQAFDLWRFNAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH ENFSRDLIYAVRALRKSPDFVLTALLSLGLGIGLNTAMFSLAVEFLLSEPSVRDASSLVY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE IRQGGNSHVQPEVIEYLRRSGVFEDVVGENEESFINFNNGAETRRIFALQATPNFFTAFG EEECCCCCCCHHHHHHHHHCCCHHHHHCCCCCCEEECCCCCCCEEEEEEECCCCCHHHCC VPVAQGRGWNESDSRDVVVLHPHFWRTRLAADPAIIGKAIHLDGRLYTVLGILPANYRSI CCHHCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHCEEEEECCCEEEHEECCCCCCHHH IGYGYSPDVFVPRYIEGTILAAYARMKPGMTLGQLNAALPAVSQRLSREHPSKYESDNHL EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SATPVSGIARLQKEKQALAVSLFFVILLVIVGLVLLIACVNVAGLLLARASIRRQEIAIR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE LALGATRVRLLQQLLAESLLLSVAGAAFGFVIALVAAKAAAATPLPFPVPIRLHIDPDWR EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCH VASYAALLAIFSALASGLMPAWQALRESLSAGMYRERKLRTRRVLVVAQIAVSFIVLTTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFLQNLVRTSSLGPGFDIRHTVRAEVYLPPAAYKESRSINAYVDRALEQLRAVPGVESA HHHHHHHHHHCCCCCCCCCCEEEEEEEEECCHHHHCCCCHHHHHHHHHHHHHCCCCCCCH AAARIIPFTDATNFGTTLTFPDTGAKPHAAFNWNAVTPDYFRAMEIPILSGRAFLPQDKG HCEEEEECCCCCCCCCEEECCCCCCCCCCEECCCCCCHHHHHHHCCEEECCCEECCCCCC GARVVIVNQEFVRRYLGSRQPIGATFLWSEDKSLYQIVGVVPGTKNMTIGEDPRAQLYEP CCEEEEECHHHHHHHHCCCCCCCEEEEECCCCCEEHHEEECCCCCCCCCCCCCHHHHHHH LAQIKNDRPRIQFVTRSATPSAAQLAAVRQALRQAEPAAGLEVETMFSAIGFAFLPSQVG HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AVLMGSIGALGLLLAVIGLYGVLSFGVARRTREIGIRIAIGAGPRDVSGMVLREFARLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHH TGIAIGLAVALFVTRPLSMFFVPGLSPNDPLTLAAVILALALTGVLAALGPVRRALRIDP HHHHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LQCLRYE HHHHCCC >Mature Secondary Structure TSLRRLFLKLLRRRALQQDLDAELAFHREMATAAGNPIPLGNSTFLKEQAFDLWRFNAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH ENFSRDLIYAVRALRKSPDFVLTALLSLGLGIGLNTAMFSLAVEFLLSEPSVRDASSLVY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE IRQGGNSHVQPEVIEYLRRSGVFEDVVGENEESFINFNNGAETRRIFALQATPNFFTAFG EEECCCCCCCHHHHHHHHHCCCHHHHHCCCCCCEEECCCCCCCEEEEEEECCCCCHHHCC VPVAQGRGWNESDSRDVVVLHPHFWRTRLAADPAIIGKAIHLDGRLYTVLGILPANYRSI CCHHCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHCEEEEECCCEEEHEECCCCCCHHH IGYGYSPDVFVPRYIEGTILAAYARMKPGMTLGQLNAALPAVSQRLSREHPSKYESDNHL EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SATPVSGIARLQKEKQALAVSLFFVILLVIVGLVLLIACVNVAGLLLARASIRRQEIAIR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE LALGATRVRLLQQLLAESLLLSVAGAAFGFVIALVAAKAAAATPLPFPVPIRLHIDPDWR EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCH VASYAALLAIFSALASGLMPAWQALRESLSAGMYRERKLRTRRVLVVAQIAVSFIVLTTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFLQNLVRTSSLGPGFDIRHTVRAEVYLPPAAYKESRSINAYVDRALEQLRAVPGVESA HHHHHHHHHHCCCCCCCCCCEEEEEEEEECCHHHHCCCCHHHHHHHHHHHHHCCCCCCCH AAARIIPFTDATNFGTTLTFPDTGAKPHAAFNWNAVTPDYFRAMEIPILSGRAFLPQDKG HCEEEEECCCCCCCCCEEECCCCCCCCCCEECCCCCCHHHHHHHCCEEECCCEECCCCCC GARVVIVNQEFVRRYLGSRQPIGATFLWSEDKSLYQIVGVVPGTKNMTIGEDPRAQLYEP CCEEEEECHHHHHHHHCCCCCCCEEEEECCCCCEEHHEEECCCCCCCCCCCCCHHHHHHH LAQIKNDRPRIQFVTRSATPSAAQLAAVRQALRQAEPAAGLEVETMFSAIGFAFLPSQVG HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AVLMGSIGALGLLLAVIGLYGVLSFGVARRTREIGIRIAIGAGPRDVSGMVLREFARLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHH TGIAIGLAVALFVTRPLSMFFVPGLSPNDPLTLAAVILALALTGVLAALGPVRRALRIDP HHHHHHHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LQCLRYE HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA