| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is bcp [H]
Identifier: 116622700
GI number: 116622700
Start: 4560225
End: 4560737
Strand: Direct
Name: bcp [H]
Synonym: Acid_3599
Alternate gene names: 116622700
Gene position: 4560225-4560737 (Clockwise)
Preceding gene: 116622699
Following gene: 116622703
Centisome position: 45.76
GC content: 57.12
Gene sequence:
>513_bases ATGCACACAGGTTTACTCCGCACTCTGATTCTTTCCGTGGCGCTGGGCGCCCGCATTGCCGCGGCAGCCGAAGCGCCGCA GGTGGGACAAGCCGCGCCGGGATTTTCGCTGCCTTCTCAGGAGGGCTCGACGGTGAGCTTGAAGCAATTCCAAGGTAAGT GGGTGGTGTTGTATTTCTATCCCAAGGACATGACCCAGGGCTGCACGATCGAAGCCCACAATTTTCAGCAGGATTTGGCC AAGTACGATAAGGCGAACGCGGTGATCGTCGGCGTAAGTGTGGACTCGACGGACAGTCACAAGGAATTCTGCACGAAGGA AAGCCTGACCTTCAAACTGCTTTCGGATACTGATAAGAAAGTGGTGGATCAATATGGTTCGCTCAGCCCGCGCGGCGTGG CGTCGCGCAACACATTCCTGATTGACCCGTCGGGCAAGATCAGCAAAGTGTGGATCGGAGTGAGCCCGGCGAAGCATAGC GAAGAAGTGCTGGCCGCGCTGGGGAGCAAATAG
Upstream 100 bases:
>100_bases TTTCTGGATGAGAACGGCAAGGTGTTACAAACGTTGCCGGATGCGAGGGGTGGGCAGTGAGCTATCGTCGAATGAGGACT GTAGGAGGTCCGTTGACGCG
Downstream 100 bases:
>100_bases CGGGCTACAGCGCAGCGACGAGGTCGATGCCGACCGCCGCCAGGATCCTGGCGGCGGGTGCGCCATTCGGTGGAATTCGG AAGACGTCGATACCGGTGGA
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MHTGLLRTLILSVALGARIAAAAEAPQVGQAAPGFSLPSQEGSTVSLKQFQGKWVVLYFYPKDMTQGCTIEAHNFQQDLA KYDKANAVIVGVSVDSTDSHKEFCTKESLTFKLLSDTDKKVVDQYGSLSPRGVASRNTFLIDPSGKISKVWIGVSPAKHS EEVLAALGSK
Sequences:
>Translated_170_residues MHTGLLRTLILSVALGARIAAAAEAPQVGQAAPGFSLPSQEGSTVSLKQFQGKWVVLYFYPKDMTQGCTIEAHNFQQDLA KYDKANAVIVGVSVDSTDSHKEFCTKESLTFKLLSDTDKKVVDQYGSLSPRGVASRNTFLIDPSGKISKVWIGVSPAKHS EEVLAALGSK >Mature_170_residues MHTGLLRTLILSVALGARIAAAAEAPQVGQAAPGFSLPSQEGSTVSLKQFQGKWVVLYFYPKDMTQGCTIEAHNFQQDLA KYDKANAVIVGVSVDSTDSHKEFCTKESLTFKLLSDTDKKVVDQYGSLSPRGVASRNTFLIDPSGKISKVWIGVSPAKHS EEVLAALGSK
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI5802974, Length=154, Percent_Identity=33.7662337662338, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI32483377, Length=137, Percent_Identity=33.5766423357664, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI4505591, Length=146, Percent_Identity=28.0821917808219, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI32455266, Length=146, Percent_Identity=28.0821917808219, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI32455264, Length=146, Percent_Identity=28.0821917808219, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI32189392, Length=145, Percent_Identity=31.0344827586207, Blast_Score=68, Evalue=4e-12, Organism=Escherichia coli, GI1788825, Length=148, Percent_Identity=38.5135135135135, Blast_Score=108, Evalue=2e-25, Organism=Caenorhabditis elegans, GI32565831, Length=144, Percent_Identity=31.25, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193204376, Length=144, Percent_Identity=31.25, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17554494, Length=132, Percent_Identity=31.0606060606061, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322180, Length=135, Percent_Identity=31.1111111111111, Blast_Score=67, Evalue=1e-12, Organism=Drosophila melanogaster, GI17738015, Length=165, Percent_Identity=33.9393939393939, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI17157991, Length=151, Percent_Identity=29.8013245033113, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24641739, Length=151, Percent_Identity=29.8013245033113, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24656348, Length=144, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=9e-12, Organism=Drosophila melanogaster, GI17864676, Length=144, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 18243; Mature: 18243
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTGLLRTLILSVALGARIAAAAEAPQVGQAAPGFSLPSQEGSTVSLKQFQGKWVVLYFY CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEE PKDMTQGCTIEAHNFQQDLAKYDKANAVIVGVSVDSTDSHKEFCTKESLTFKLLSDTDKK CCCCCCCCEEEECCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCCHHH VVDQYGSLSPRGVASRNTFLIDPSGKISKVWIGVSPAKHSEEVLAALGSK HHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCC >Mature Secondary Structure MHTGLLRTLILSVALGARIAAAAEAPQVGQAAPGFSLPSQEGSTVSLKQFQGKWVVLYFY CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEE PKDMTQGCTIEAHNFQQDLAKYDKANAVIVGVSVDSTDSHKEFCTKESLTFKLLSDTDKK CCCCCCCCEEEECCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCCHHH VVDQYGSLSPRGVASRNTFLIDPSGKISKVWIGVSPAKHSEEVLAALGSK HHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]