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The map label for this gene is ydaF [H]

Identifier: 116622688

GI number: 116622688

Start: 4542697

End: 4543293

Strand: Reverse

Name: ydaF [H]

Synonym: Acid_3587

Alternate gene names: 116622688

Gene position: 4543293-4542697 (Counterclockwise)

Preceding gene: 116622689

Following gene: 116622686

Centisome position: 45.59

GC content: 62.31

Gene sequence:

>597_bases
ATGTTCTCGCGCAAAGTCGCCCCGGGCATTGAGCTCCGGATGTTCGAATTGAGAGACGCCGAGACGGTGTTCGCCGTCGT
GAACCGCAATCGCGCGTACTTGCGCCAGTGGCTCCCATGGGTGGATCTTACTGCGTCATCGGAGCAGATCCGCAACTTCA
TCGTGCGCGTGCGCGATCAGTTCGACACCAGCCGCGGTCCTCAGGCCGGCATCTGGATCAATGGGGAATTCGGCGGCTCG
GTGGGCTGCCATCCCATCGACTGGCCCAACAAGAATTGCAGCATCGGCTACTGGATCGAAGAGCGCCACCAGGGCAAAGG
CATCATGACGCGCTGCTGCGCCAACATGATCGATTACCTGCTGCGCGATCTCGGTCTGCACCGCGTCACCATCCAGTGCG
GCACCGGCAATCAGCGCAGCTGCGCGATCCCGGAACGCCTGGGCTTCACCCGCGAGGGCATCACCCGCGAGGGCGAATGG
GTTAACGACCGCTGGATCGACCTCATCGTCTGGGGCATGCTCGAACAGGATTGGCGCGCCCGTCCCAAAACAGGCACGCT
CTCAACGAACCGCGACCGTAAGGGAGCCGATCTCTAA

Upstream 100 bases:

>100_bases
AGGAGGGGCTGCTACAATACGCGCAGCCGGAAACGCCGGAGACGCCGGCGATTGCCAAGTCCACCAATCCGCTGAAGCCG
GCCGGAGCGTAGATCCCAGC

Downstream 100 bases:

>100_bases
ACCAAAGCAGATCGCCCCCTGAGGGTCGCGGCTCGTTGGGTCTACTTAAACACCAGGAAGATGCCGTCCGTATTGCCGCC
CATGTAGCCCCCGGCGCCGA

Product: GCN5-like N-acetyltransferase

Products: CoA; Ribosomal-Protein N-Acetyl-L-Serine. [C]

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MFSRKVAPGIELRMFELRDAETVFAVVNRNRAYLRQWLPWVDLTASSEQIRNFIVRVRDQFDTSRGPQAGIWINGEFGGS
VGCHPIDWPNKNCSIGYWIEERHQGKGIMTRCCANMIDYLLRDLGLHRVTIQCGTGNQRSCAIPERLGFTREGITREGEW
VNDRWIDLIVWGMLEQDWRARPKTGTLSTNRDRKGADL

Sequences:

>Translated_198_residues
MFSRKVAPGIELRMFELRDAETVFAVVNRNRAYLRQWLPWVDLTASSEQIRNFIVRVRDQFDTSRGPQAGIWINGEFGGS
VGCHPIDWPNKNCSIGYWIEERHQGKGIMTRCCANMIDYLLRDLGLHRVTIQCGTGNQRSCAIPERLGFTREGITREGEW
VNDRWIDLIVWGMLEQDWRARPKTGTLSTNRDRKGADL
>Mature_198_residues
MFSRKVAPGIELRMFELRDAETVFAVVNRNRAYLRQWLPWVDLTASSEQIRNFIVRVRDQFDTSRGPQAGIWINGEFGGS
VGCHPIDWPNKNCSIGYWIEERHQGKGIMTRCCANMIDYLLRDLGLHRVTIQCGTGNQRSCAIPERLGFTREGITREGEW
VNDRWIDLIVWGMLEQDWRARPKTGTLSTNRDRKGADL

Specific function: Putative N-acetyltransferase. May act on ribosomal proteins (Potential) [H]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1787697, Length=168, Percent_Identity=26.1904761904762, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 22885; Mature: 22885

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSRKVAPGIELRMFELRDAETVFAVVNRNRAYLRQWLPWVDLTASSEQIRNFIVRVRDQ
CCCCCCCCCCEEEEEECCCCCEEEEEHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
FDTSRGPQAGIWINGEFGGSVGCHPIDWPNKNCSIGYWIEERHQGKGIMTRCCANMIDYL
HCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
LRDLGLHRVTIQCGTGNQRSCAIPERLGFTREGITREGEWVNDRWIDLIVWGMLEQDWRA
HHHCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHCC
RPKTGTLSTNRDRKGADL
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFSRKVAPGIELRMFELRDAETVFAVVNRNRAYLRQWLPWVDLTASSEQIRNFIVRVRDQ
CCCCCCCCCCEEEEEECCCCCEEEEEHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
FDTSRGPQAGIWINGEFGGSVGCHPIDWPNKNCSIGYWIEERHQGKGIMTRCCANMIDYL
HCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
LRDLGLHRVTIQCGTGNQRSCAIPERLGFTREGITREGEWVNDRWIDLIVWGMLEQDWRA
HHHCCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHEEHHHHHHHHHHHCC
RPKTGTLSTNRDRKGADL
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; Ribosomal-Protein L-Serine [C]

Specific reaction: Acetyl-CoA + Ribosomal-Protein L-Serine = CoA + Ribosomal-Protein N-Acetyl-L-Serine. [C]

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]