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The map label for this gene is pds [H]

Identifier: 116622665

GI number: 116622665

Start: 4511830

End: 4513131

Strand: Direct

Name: pds [H]

Synonym: Acid_3564

Alternate gene names: 116622665

Gene position: 4511830-4513131 (Clockwise)

Preceding gene: 116622664

Following gene: 116622666

Centisome position: 45.27

GC content: 63.21

Gene sequence:

>1302_bases
ATGCCCAAAGTGTTGATAGCCGGCGGCGGACTCGCCGGACTCGCGGCCGCGGCGGCGCTCGGTCGCGATGGCTGGGAGGT
CGATCTTTTCGAAGCGCGGCCCTTTCTCGGCGGACGCGCCACATCGTATGCCGTGCCTTCCGGTGGAGACGAAATCGCCG
AGACCATCGACAACTGCCAGCATGTCCTCTTGCGCTGCTGTATCAACCTGCTCGATTTCTACCAGCGCCTCGGCGTCCGC
GACCGCATTAAGTTTTATCGCGAGTTCTTTTTCATCGAACCCGGCGGCCGCATCTCCGTCCTGCGTCGCGGCAAACTGCC
CGCTCCGCTGCATTTCACCGAGTCTTTCCTCGGAATGCACTTCCTGAGCTTCGCCGACAAAGTGGGGATCGGCAAAGCCC
TGCTCGCGCTCCGCCGGGAACGGAACCGCCGTAAAGATCTCGACCGCATCAGCATGCTCGATTGGCTCCTGCAGAAGCGA
CAGACGCCCCACGCGATCGACCGCTTTTGGCGCCAGGTGCTGGTCAGTGCCGTCAACGAAGATCTCGACCGCATGGCCGC
CATCCACGGCTTCCAGGTCTTCTGGCTCGGCTTTTTGGCCAGCGCCGATGGCTACGAAATGGGTGTGCCCAACGTGCCCC
TCGGAGACCTCTATACCGCCGAGGCCTGGCGGCGGCTGGGCAACGTCCGCATGCATTTCCGTGCCCCCGTAGAACGCATC
GATGGCACGGGCTTCATGGTGGGCGGCGAGCATCTGACGGCGGACCGCTACATCTGCGCGCTGCCCTTCGAGCGGATGGA
AAGCGTCGGCCTGCCCGCGCCTAAGCTCGAGCACTCGCCGATCACCGGTATCCACCTGTGGTTCGATCGGGAAATCACCA
CGCTGCCCCATGCCACGCTGCTCGACCGCACCATGCAGTGGATGTTCAATAAGGATGGCGGACGCTACCTGCAACTGGTG
GTCAGCGCGTCGCGTGATCTCACTCCGCTTTCCCGCAAGGAGATCATCGACATCGCGGTGGGCGACCTGCGTCTGTATTT
CCCGCGTGTGCGGGAGGCGAAACTGGTCAAGGCCCACGTGGTGAAGGAGCAGCGCGCCACTTTTGCCGCGGCTCCCGAGA
CCGAAGTCCTGCGGCCCGGCGCCGTAACCCCATTCCCCAATCTATTCATCGCCGGAGACTGGACGCGGACCAACTGGCCT
GCGACAATGGAAGGTGCCGTGCGCAGCGGCTATATCGCTGCCGAGGCTCTCGCCAAATCCTCGAATCAATCCCCCCGCTA
CCTACTTCAGGACCGTCGTTAA

Upstream 100 bases:

>100_bases
TTCGGCGGCTCGGCTTCGGAACAGAGCGTTTTGCCAGCGACGAATTCCGTTCCTCTCCGTCTAAAAGGAGAAATCCGGAT
TTCTGGGATACTGAAACTTC

Downstream 100 bases:

>100_bases
CGCTACTTTAACGTAAAGTTGCGTAATGAAAAGGCCTGAATATATTGAAACTCCTGGTGCAACCAGTTATAGTGTGTAAA
AAGTCTCGCTATCGGGTCTT

Product: amine oxidase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MPKVLIAGGGLAGLAAAAALGRDGWEVDLFEARPFLGGRATSYAVPSGGDEIAETIDNCQHVLLRCCINLLDFYQRLGVR
DRIKFYREFFFIEPGGRISVLRRGKLPAPLHFTESFLGMHFLSFADKVGIGKALLALRRERNRRKDLDRISMLDWLLQKR
QTPHAIDRFWRQVLVSAVNEDLDRMAAIHGFQVFWLGFLASADGYEMGVPNVPLGDLYTAEAWRRLGNVRMHFRAPVERI
DGTGFMVGGEHLTADRYICALPFERMESVGLPAPKLEHSPITGIHLWFDREITTLPHATLLDRTMQWMFNKDGGRYLQLV
VSASRDLTPLSRKEIIDIAVGDLRLYFPRVREAKLVKAHVVKEQRATFAAAPETEVLRPGAVTPFPNLFIAGDWTRTNWP
ATMEGAVRSGYIAAEALAKSSNQSPRYLLQDRR

Sequences:

>Translated_433_residues
MPKVLIAGGGLAGLAAAAALGRDGWEVDLFEARPFLGGRATSYAVPSGGDEIAETIDNCQHVLLRCCINLLDFYQRLGVR
DRIKFYREFFFIEPGGRISVLRRGKLPAPLHFTESFLGMHFLSFADKVGIGKALLALRRERNRRKDLDRISMLDWLLQKR
QTPHAIDRFWRQVLVSAVNEDLDRMAAIHGFQVFWLGFLASADGYEMGVPNVPLGDLYTAEAWRRLGNVRMHFRAPVERI
DGTGFMVGGEHLTADRYICALPFERMESVGLPAPKLEHSPITGIHLWFDREITTLPHATLLDRTMQWMFNKDGGRYLQLV
VSASRDLTPLSRKEIIDIAVGDLRLYFPRVREAKLVKAHVVKEQRATFAAAPETEVLRPGAVTPFPNLFIAGDWTRTNWP
ATMEGAVRSGYIAAEALAKSSNQSPRYLLQDRR
>Mature_432_residues
PKVLIAGGGLAGLAAAAALGRDGWEVDLFEARPFLGGRATSYAVPSGGDEIAETIDNCQHVLLRCCINLLDFYQRLGVRD
RIKFYREFFFIEPGGRISVLRRGKLPAPLHFTESFLGMHFLSFADKVGIGKALLALRRERNRRKDLDRISMLDWLLQKRQ
TPHAIDRFWRQVLVSAVNEDLDRMAAIHGFQVFWLGFLASADGYEMGVPNVPLGDLYTAEAWRRLGNVRMHFRAPVERID
GTGFMVGGEHLTADRYICALPFERMESVGLPAPKLEHSPITGIHLWFDREITTLPHATLLDRTMQWMFNKDGGRYLQLVV
SASRDLTPLSRKEIIDIAVGDLRLYFPRVREAKLVKAHVVKEQRATFAAAPETEVLRPGAVTPFPNLFIAGDWTRTNWPA
TMEGAVRSGYIAAEALAKSSNQSPRYLLQDRR

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG3349

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001613
- InterPro:   IPR002937
- InterPro:   IPR014102 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: 1.14.99.-

Molecular weight: Translated: 48787; Mature: 48656

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVLIAGGGLAGLAAAAALGRDGWEVDLFEARPFLGGRATSYAVPSGGDEIAETIDNCQ
CCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HVLLRCCINLLDFYQRLGVRDRIKFYREFFFIEPGGRISVLRRGKLPAPLHFTESFLGMH
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCHHHHHHHHHH
FLSFADKVGIGKALLALRRERNRRKDLDRISMLDWLLQKRQTPHAIDRFWRQVLVSAVNE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DLDRMAAIHGFQVFWLGFLASADGYEMGVPNVPLGDLYTAEAWRRLGNVRMHFRAPVERI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCHHHC
DGTGFMVGGEHLTADRYICALPFERMESVGLPAPKLEHSPITGIHLWFDREITTLPHATL
CCCEEEECCCEECCCCEEEECCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
LDRTMQWMFNKDGGRYLQLVVSASRDLTPLSRKEIIDIAVGDLRLYFPRVREAKLVKAHV
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHEECCHHEECCHHHHHHHHHHHH
VKEQRATFAAAPETEVLRPGAVTPFPNLFIAGDWTRTNWPATMEGAVRSGYIAAEALAKS
HHHHHHHEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHC
SNQSPRYLLQDRR
CCCCCHHHCCCCC
>Mature Secondary Structure 
PKVLIAGGGLAGLAAAAALGRDGWEVDLFEARPFLGGRATSYAVPSGGDEIAETIDNCQ
CEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HVLLRCCINLLDFYQRLGVRDRIKFYREFFFIEPGGRISVLRRGKLPAPLHFTESFLGMH
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCHHHHHHHHHH
FLSFADKVGIGKALLALRRERNRRKDLDRISMLDWLLQKRQTPHAIDRFWRQVLVSAVNE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DLDRMAAIHGFQVFWLGFLASADGYEMGVPNVPLGDLYTAEAWRRLGNVRMHFRAPVERI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCHHHC
DGTGFMVGGEHLTADRYICALPFERMESVGLPAPKLEHSPITGIHLWFDREITTLPHATL
CCCEEEECCCEECCCCEEEECCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
LDRTMQWMFNKDGGRYLQLVVSASRDLTPLSRKEIIDIAVGDLRLYFPRVREAKLVKAHV
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHEECCHHEECCHHHHHHHHHHHH
VKEQRATFAAAPETEVLRPGAVTPFPNLFIAGDWTRTNWPATMEGAVRSGYIAAEALAKS
HHHHHHHEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHC
SNQSPRYLLQDRR
CCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1581575; 8905231 [H]