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The map label for this gene is glbO [H]

Identifier: 116622620

GI number: 116622620

Start: 4456643

End: 4457662

Strand: Direct

Name: glbO [H]

Synonym: Acid_3519

Alternate gene names: 116622620

Gene position: 4456643-4457662 (Clockwise)

Preceding gene: 116622618

Following gene: 116622621

Centisome position: 44.72

GC content: 66.57

Gene sequence:

>1020_bases
ATGAATACCCGCCAATTTCGATACGATGTCCGGGTGGCGATCTACGACGCGATTGGCGGGATGGCGGGATGCAGGCGGCT
GGCGGCGGCGTTCTATGCACGCGTCGAGCGCGACCCGGTGGTGCGGCCGTTGTATCCGAAATCGCTGCACTGCGCGGTGG
ATGCGATCGCGATGTTCCTGGTCCAGCAGTTCGGCGGACCATGCGAGTACTCGGAAAACCGCGCCACGCTGAGCCTGTAC
GAATCGCATCTGCGCTTTGCCATCGGCCAAGCCGAGCGTGACGCCTGGTTGCGGGACATGACGGCGGCAATGGACGACAT
CGGAATCGGCGAACCCGAGCGGGCCGAGATGGTGCTGTACTTCGAGCAGACGTCCGCGTACCTAATCAACCGGCCGAAGC
CGGATCGTGCACCCGGAGTGCTGGTGGCGGACGACGCCATCGCCGCCCTGCGCCGCGGGGACCTGAAGCGGGTATCGGAA
TTGGCCGGGCATCCCGAATATCAGCGCGACCGGGCGGCCTGGGTTGGTCTGCTCGGGAAGATGGCGGCGAGCGACGACCC
ACGAATCCTGGAGTTCGCCCTGACGCGCATCTCGGCCGACCCGGGGTTGGCGCAGGAACGCTACGGAGGCTCCCTGTTGC
GCATGGCGGCCGCAGCGGGCTGCCTCGCCATGGTGGAACTTCTGCTGCGCCTCGGCGTAGACCCGAACGCCGTGGACCGG
TACGGGCATCCTCCGCTTTACTTCGTGGGCAATCAGTGCCGGCGGGAGTCGGGACCCGCAGTCGTTCGCGCACTGGTATC
GGGAGGGGCGAATGTGAATCAGCAGGATCGGGTAAAGCGCTGCACGCCGCTGCATATGGCGGCACGGCGCGGCAATGTCG
CGGTGGCGGAGGCGCTCCTGGAGTGGGGCGCCGACCCTGGGATTGGTGATATCGCGGGGGTTACGCCTCTCCAGCGCGCC
CTCAACTGCCGCAAGCCAGAAGTCGCGGCACTACTTTCTGCCTCCTCTGGCGGCCGGTGA

Upstream 100 bases:

>100_bases
CGCCCCGCCCCAATGCGGCTCGATCCCTACAGAGGCATACTGCCATTTCCAGTTTGCGGCTCGCCGCCAAACGGCGCGTT
CCCCGATAAAACATACGCCA

Downstream 100 bases:

>100_bases
GCGTATGAGTAGATAGAGCCTGGTGACCTAAGTTAGGTCACCAACGATCTTGTCGCATCGTAGTTTCAACGACTTCCGAT
TTGGCAGTGACCTAACTTAG

Product: globin

Products: NA

Alternate protein names: Hemoglobin-like protein HbO; Truncated hemoglobin; trHbO [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNTRQFRYDVRVAIYDAIGGMAGCRRLAAAFYARVERDPVVRPLYPKSLHCAVDAIAMFLVQQFGGPCEYSENRATLSLY
ESHLRFAIGQAERDAWLRDMTAAMDDIGIGEPERAEMVLYFEQTSAYLINRPKPDRAPGVLVADDAIAALRRGDLKRVSE
LAGHPEYQRDRAAWVGLLGKMAASDDPRILEFALTRISADPGLAQERYGGSLLRMAAAAGCLAMVELLLRLGVDPNAVDR
YGHPPLYFVGNQCRRESGPAVVRALVSGGANVNQQDRVKRCTPLHMAARRGNVAVAEALLEWGADPGIGDIAGVTPLQRA
LNCRKPEVAALLSASSGGR

Sequences:

>Translated_339_residues
MNTRQFRYDVRVAIYDAIGGMAGCRRLAAAFYARVERDPVVRPLYPKSLHCAVDAIAMFLVQQFGGPCEYSENRATLSLY
ESHLRFAIGQAERDAWLRDMTAAMDDIGIGEPERAEMVLYFEQTSAYLINRPKPDRAPGVLVADDAIAALRRGDLKRVSE
LAGHPEYQRDRAAWVGLLGKMAASDDPRILEFALTRISADPGLAQERYGGSLLRMAAAAGCLAMVELLLRLGVDPNAVDR
YGHPPLYFVGNQCRRESGPAVVRALVSGGANVNQQDRVKRCTPLHMAARRGNVAVAEALLEWGADPGIGDIAGVTPLQRA
LNCRKPEVAALLSASSGGR
>Mature_339_residues
MNTRQFRYDVRVAIYDAIGGMAGCRRLAAAFYARVERDPVVRPLYPKSLHCAVDAIAMFLVQQFGGPCEYSENRATLSLY
ESHLRFAIGQAERDAWLRDMTAAMDDIGIGEPERAEMVLYFEQTSAYLINRPKPDRAPGVLVADDAIAALRRGDLKRVSE
LAGHPEYQRDRAAWVGLLGKMAASDDPRILEFALTRISADPGLAQERYGGSLLRMAAAAGCLAMVELLLRLGVDPNAVDR
YGHPPLYFVGNQCRRESGPAVVRALVSGGANVNQQDRVKRCTPLHMAARRGNVAVAEALLEWGADPGIGDIAGVTPLQRA
LNCRKPEVAALLSASSGGR

Specific function: Unknown

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

Organism=Homo sapiens, GI30425444, Length=120, Percent_Identity=37.5, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI28605137, Length=133, Percent_Identity=37.593984962406, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI4506217, Length=133, Percent_Identity=37.593984962406, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 36907; Mature: 36907

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRQFRYDVRVAIYDAIGGMAGCRRLAAAFYARVERDPVVRPLYPKSLHCAVDAIAMFL
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
VQQFGGPCEYSENRATLSLYESHLRFAIGQAERDAWLRDMTAAMDDIGIGEPERAEMVLY
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
FEQTSAYLINRPKPDRAPGVLVADDAIAALRRGDLKRVSELAGHPEYQRDRAAWVGLLGK
EECCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MAASDDPRILEFALTRISADPGLAQERYGGSLLRMAAAAGCLAMVELLLRLGVDPNAVDR
HHCCCCCHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
YGHPPLYFVGNQCRRESGPAVVRALVSGGANVNQQDRVKRCTPLHMAARRGNVAVAEALL
CCCCCEEECCCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHH
EWGADPGIGDIAGVTPLQRALNCRKPEVAALLSASSGGR
HHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MNTRQFRYDVRVAIYDAIGGMAGCRRLAAAFYARVERDPVVRPLYPKSLHCAVDAIAMFL
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
VQQFGGPCEYSENRATLSLYESHLRFAIGQAERDAWLRDMTAAMDDIGIGEPERAEMVLY
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
FEQTSAYLINRPKPDRAPGVLVADDAIAALRRGDLKRVSELAGHPEYQRDRAAWVGLLGK
EECCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MAASDDPRILEFALTRISADPGLAQERYGGSLLRMAAAAGCLAMVELLLRLGVDPNAVDR
HHCCCCCHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
YGHPPLYFVGNQCRRESGPAVVRALVSGGANVNQQDRVKRCTPLHMAARRGNVAVAEALL
CCCCCEEECCCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHH
EWGADPGIGDIAGVTPLQRALNCRKPEVAALLSASSGGR
HHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]