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The map label for this gene is 116622610

Identifier: 116622610

GI number: 116622610

Start: 4440370

End: 4440939

Strand: Direct

Name: 116622610

Synonym: Acid_3508

Alternate gene names: NA

Gene position: 4440370-4440939 (Clockwise)

Preceding gene: 116622609

Following gene: 116622611

Centisome position: 44.56

GC content: 62.98

Gene sequence:

>570_bases
ATGCTAAGGAAAGCCGATACCAGCGCCGGCGCCGCCGTCGTCTTCGCCCTGGCGTTCTTCTTCGTCGGCGGAGTCCTCAC
CACCGTCGTTCCGCCCCTGGTCGATAAGTCCTGGTCCAAGCCCTTCGATAACAGCGACCCGGCCAAAGGGCCCACGGGCA
AGCTGCAGCCCTACACCGCGCAGCAACTCCACGGCCGCGAGATTTACGTCCGCGAAGGCTGCTGGTATTGCCATACTCAG
CAGACCCGCACCTTGCTTGCCGATACCAAGCGCTCCGGTTGGAAGGGCGTCGATTCGCCCATCTCCACGCCCGACGAGTT
CGTCTACGACTCGCCGCACATGTTCGGCACCAAGCGCACCGGCCCCGATCTTTCCCGCGTCGGCGGCAAGTACGATACTC
AGTGGCACCGCACCCACTTCCGCAATCCGCGCGATCTGGTGCCAGGCTCCGTCATGCCGCCCTTCCCCTGGATCGTCGAG
AACAAGGAAGAGTTCACCAGCCTGGTGGCGTACATCCAGACTCTCGGCCGCGCCAAGAACTGGCGTCCGAACAACGATTA
CGAAAAGTAG

Upstream 100 bases:

>100_bases
GGCTGGTCCGCTTCTTTTCCGGCACCCTGATGCTCACCGGCATCGTGCTCTTCGCGTACAACATCCTGGCCACCATCGTG
GGCGTAAGGAGGACATCCGA

Downstream 100 bases:

>100_bases
GAGGACTCTATGGACTACATGTATCCCAGCATATTTTTCGCCTACTTTCTCTTCCTGGTGCTGACCGTGCTGACCGGTTA
CTTCTGCGTGCGCAGCATCA

Product: cytochrome C oxidase, mono-heme subunit/FixO

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase Mono-Heme Subunit/FixO; Cytochrome C Oxidase Cbb3-Type Subunit I; Cb-Type Cytochrome C Oxidase Subunit II; Cbb3-Type Cytochrome Oxidase Cytochrome C Subunit; Bifunctional Cbb3-Type Cytochrome C Oxidase Subunit I/II; Cytochrome C Oxidase; Cytochrome-C Oxidase FixO Chain; Cytochrome C Oxidase Subunit CcoO; Cytochrome Oxidase Cytochrome C Subunit; Cytochrome Oxidase Subunit; Cytochrome C Oxidase Subunit; Cytochrome-C Oxidase Subunit II; Bifunctional Cytochrome C Oxidase Subunit SccoN/O; Transmembrane Cytochrome C Oxidase FixO Protein; Cytochrome-Cbb3 Oxidase Subunit I; Cbb3-Type Cytochrome Oxidase; Cbb3-Type Cytochrome C Oxidase Subunit CcoO; Cbb3-Type Cytochrome C Oxidase Subunit I + II; Cytochrome Oxidase; Cytochrome C Oxidase Mono-Heme Subunit; Cytochrome C Oxidase Cbb3-Type; Cytochrome C Oxidase Cbb3-Type Mono-Heme Subunit II; Cytochrome Cbb3 Oxidase Subunit I/III; Cytochrome C Oxidase Family Protein; Cytochrome C Oxidase Subunit CcoN; Cytochrome C Oxidase Cbb3-Type Subunit I/Mono-Heme Subunit; Cytochrome C Oxidase FixO Chain; Cytochrome C Oxidase Mono-Heme Subunit/FixO Superfamily; Cytochrome-Cbb3 Oxidase Subunit II; Cytochrome C Oxidase CcoO Subunit; Cbb3-Type Cytochrome C Oxidase Subunits CcoN/CcoO; Cytochrome C Oxidase Cbb3-Type Subunit I And II

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MLRKADTSAGAAVVFALAFFFVGGVLTTVVPPLVDKSWSKPFDNSDPAKGPTGKLQPYTAQQLHGREIYVREGCWYCHTQ
QTRTLLADTKRSGWKGVDSPISTPDEFVYDSPHMFGTKRTGPDLSRVGGKYDTQWHRTHFRNPRDLVPGSVMPPFPWIVE
NKEEFTSLVAYIQTLGRAKNWRPNNDYEK

Sequences:

>Translated_189_residues
MLRKADTSAGAAVVFALAFFFVGGVLTTVVPPLVDKSWSKPFDNSDPAKGPTGKLQPYTAQQLHGREIYVREGCWYCHTQ
QTRTLLADTKRSGWKGVDSPISTPDEFVYDSPHMFGTKRTGPDLSRVGGKYDTQWHRTHFRNPRDLVPGSVMPPFPWIVE
NKEEFTSLVAYIQTLGRAKNWRPNNDYEK
>Mature_189_residues
MLRKADTSAGAAVVFALAFFFVGGVLTTVVPPLVDKSWSKPFDNSDPAKGPTGKLQPYTAQQLHGREIYVREGCWYCHTQ
QTRTLLADTKRSGWKGVDSPISTPDEFVYDSPHMFGTKRTGPDLSRVGGKYDTQWHRTHFRNPRDLVPGSVMPPFPWIVE
NKEEFTSLVAYIQTLGRAKNWRPNNDYEK

Specific function: Unknown

COG id: COG2993

COG function: function code C; Cbb3-type cytochrome oxidase, cytochrome c subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 21378; Mature: 21378

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKADTSAGAAVVFALAFFFVGGVLTTVVPPLVDKSWSKPFDNSDPAKGPTGKLQPYTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
QQLHGREIYVREGCWYCHTQQTRTLLADTKRSGWKGVDSPISTPDEFVYDSPHMFGTKRT
HHHCCCEEEEECCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
GPDLSRVGGKYDTQWHRTHFRNPRDLVPGSVMPPFPWIVENKEEFTSLVAYIQTLGRAKN
CCCHHHHCCCCCCHHHHHHCCCCHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCC
WRPNNDYEK
CCCCCCCCC
>Mature Secondary Structure
MLRKADTSAGAAVVFALAFFFVGGVLTTVVPPLVDKSWSKPFDNSDPAKGPTGKLQPYTA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
QQLHGREIYVREGCWYCHTQQTRTLLADTKRSGWKGVDSPISTPDEFVYDSPHMFGTKRT
HHHCCCEEEEECCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
GPDLSRVGGKYDTQWHRTHFRNPRDLVPGSVMPPFPWIVENKEEFTSLVAYIQTLGRAKN
CCCHHHHCCCCCCHHHHHHCCCCHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCC
WRPNNDYEK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA