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The map label for this gene is yjeB [C]

Identifier: 116622605

GI number: 116622605

Start: 4434783

End: 4435208

Strand: Direct

Name: yjeB [C]

Synonym: Acid_3503

Alternate gene names: 116622605

Gene position: 4434783-4435208 (Clockwise)

Preceding gene: 116622604

Following gene: 116622606

Centisome position: 44.5

GC content: 65.49

Gene sequence:

>426_bases
ATGCAATTGACCCGCGCCGCGGATTATGCCGTGCGCATGATGATCCATCTCGCGACCTTGCCGTCCGATAGCCGCACCAA
TCGGGCCGCCCTCGCCGCAGCCTGCGAGATCCCCGAACCCTTCGTCGGCAAGATCCTCCAGACCTTGACCCGCAGCGGAT
TGATCGCCTCCCATCGCGGCGTCAACGGAGGTTTCGGCCTGACCCAACCACCCACCGCCGTCTCCCTTCTCGACGTCATT
GAGGCCGTGGAAGGGCCCACCCTGCTCAATATCTGCATTCGCCCCGGCGATAGCTGCGCCCGCAAATCCTGGTGCCCCGC
ACATCCTGTCTGGGTCGAAGCCCAGCACGCCATGACCGCCGTCCTCGGCCGCGCCACTCTCGCCTCCCTCGCCCAATCAG
ATACCGGAGGCTGCCAGTGGACCTGA

Upstream 100 bases:

>100_bases
GGCTCCCGGCCTGGCCACTAATCGGGTTTTCAATTTTCCCCCTTGACAATATGAGATAAAAAGACTCTAATTTAACTTGA
TTTGAAAATCGGAGTTTGGG

Downstream 100 bases:

>100_bases
CCTTGATCGCCCTTGCCGCCAGTCTCCTCATGGGCCTCGGCGCCGCCTGCATTTTCATCTTTGCCGTGAAACGCGATTAT
TTCCGGAACCTGGAAGACGT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MQLTRAADYAVRMMIHLATLPSDSRTNRAALAAACEIPEPFVGKILQTLTRSGLIASHRGVNGGFGLTQPPTAVSLLDVI
EAVEGPTLLNICIRPGDSCARKSWCPAHPVWVEAQHAMTAVLGRATLASLAQSDTGGCQWT

Sequences:

>Translated_141_residues
MQLTRAADYAVRMMIHLATLPSDSRTNRAALAAACEIPEPFVGKILQTLTRSGLIASHRGVNGGFGLTQPPTAVSLLDVI
EAVEGPTLLNICIRPGDSCARKSWCPAHPVWVEAQHAMTAVLGRATLASLAQSDTGGCQWT
>Mature_141_residues
MQLTRAADYAVRMMIHLATLPSDSRTNRAALAAACEIPEPFVGKILQTLTRSGLIASHRGVNGGFGLTQPPTAVSLLDVI
EAVEGPTLLNICIRPGDSCARKSWCPAHPVWVEAQHAMTAVLGRATLASLAQSDTGGCQWT

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=134, Percent_Identity=29.1044776119403, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 14919; Mature: 14919

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTRAADYAVRMMIHLATLPSDSRTNRAALAAACEIPEPFVGKILQTLTRSGLIASHRG
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
VNGGFGLTQPPTAVSLLDVIEAVEGPTLLNICIRPGDSCARKSWCPAHPVWVEAQHAMTA
CCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCCCEEEHHHHHHH
VLGRATLASLAQSDTGGCQWT
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQLTRAADYAVRMMIHLATLPSDSRTNRAALAAACEIPEPFVGKILQTLTRSGLIASHRG
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
VNGGFGLTQPPTAVSLLDVIEAVEGPTLLNICIRPGDSCARKSWCPAHPVWVEAQHAMTA
CCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCCCEEEHHHHHHH
VLGRATLASLAQSDTGGCQWT
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]