| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622563
Identifier: 116622563
GI number: 116622563
Start: 4377338
End: 4377748
Strand: Reverse
Name: 116622563
Synonym: Acid_3461
Alternate gene names: NA
Gene position: 4377748-4377338 (Counterclockwise)
Preceding gene: 116622565
Following gene: 116622562
Centisome position: 43.93
GC content: 62.53
Gene sequence:
>411_bases TTGGTCCGGATCGACCGTTGCGAATGGCTGAGCTATAGTAGTGGTTTGCCTGACTGCCCGATCTGCGCGATCAATCCGGA AGACACCTGGGTCCTCACCGAGTTTGTGGTCGCCGTGCCACACACCAACCCTCTGACCTCCTGCCACGTAATTGTGGCGC CGCGCCGGCATGTCGCCGCGTTTTACGATCTGGACGTGCAGGAACAGCGCATGATCTGGGATGCGCTCGCGGAGTTGCGC GTACGCATCAAGTCGTCGCTGAATGTGGAAGGCTTCGACGTCGGGTTCGCCGATGCGCCGGTGAGCGACGATGGCGCCGG GCACGCATTCGTGCACCTGATCCCGCGGATTCCCGGCGAGAGCTACGACAAGCCGCGCGGCGTCGAGTGGGTGGATCTGG GTTCGCAATAG
Upstream 100 bases:
>100_bases GCGCCCGCACGCTGGCCGCCTTACGCGGGCTGCTCTCCGCCTATGCGGGACGCGCGATTCACGTCGATCCGGAAACGCAT AGCGCACAAGTAAGCTCGAT
Downstream 100 bases:
>100_bases AATAGGACGAATGCCGTCCGAGCCGCTGCTCGAAGTTCGCGATTTGACGATTTCCCTGCTGCCGGACCGCACATTGCTGC ACGACGTTTGCTTCTCGATT
Product: putative cell-cycle regulation histidine triad protein
Products: NA
Alternate protein names: Cell-Cycle Regulation Histidine Triad Protein; Conserved Hipothetical Protein Containing HIT Domain
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MVRIDRCEWLSYSSGLPDCPICAINPEDTWVLTEFVVAVPHTNPLTSCHVIVAPRRHVAAFYDLDVQEQRMIWDALAELR VRIKSSLNVEGFDVGFADAPVSDDGAGHAFVHLIPRIPGESYDKPRGVEWVDLGSQ
Sequences:
>Translated_136_residues MVRIDRCEWLSYSSGLPDCPICAINPEDTWVLTEFVVAVPHTNPLTSCHVIVAPRRHVAAFYDLDVQEQRMIWDALAELR VRIKSSLNVEGFDVGFADAPVSDDGAGHAFVHLIPRIPGESYDKPRGVEWVDLGSQ >Mature_136_residues MVRIDRCEWLSYSSGLPDCPICAINPEDTWVLTEFVVAVPHTNPLTSCHVIVAPRRHVAAFYDLDVQEQRMIWDALAELR VRIKSSLNVEGFDVGFADAPVSDDGAGHAFVHLIPRIPGESYDKPRGVEWVDLGSQ
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15172; Mature: 15172
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRIDRCEWLSYSSGLPDCPICAINPEDTWVLTEFVVAVPHTNPLTSCHVIVAPRRHVAA CCCCCCCCEECCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEE FYDLDVQEQRMIWDALAELRVRIKSSLNVEGFDVGFADAPVSDDGAGHAFVHLIPRIPGE EECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCC SYDKPRGVEWVDLGSQ CCCCCCCCEEEECCCC >Mature Secondary Structure MVRIDRCEWLSYSSGLPDCPICAINPEDTWVLTEFVVAVPHTNPLTSCHVIVAPRRHVAA CCCCCCCCEECCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEE FYDLDVQEQRMIWDALAELRVRIKSSLNVEGFDVGFADAPVSDDGAGHAFVHLIPRIPGE EECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCC SYDKPRGVEWVDLGSQ CCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA