| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622505
Identifier: 116622505
GI number: 116622505
Start: 4307241
End: 4307921
Strand: Reverse
Name: 116622505
Synonym: Acid_3403
Alternate gene names: NA
Gene position: 4307921-4307241 (Counterclockwise)
Preceding gene: 116622507
Following gene: 116622503
Centisome position: 43.23
GC content: 58.74
Gene sequence:
>681_bases GTGGGGTTAGGTACTACTTTGTCAACATCGGTAATCATCATCGGAGCGGCGTGCACTCAAGTACTGTGCGCGCAAGGCTC GGAATTCAGCAAACTCAACACGAACCTGGGAGTGGGCATGACGGTGCCGCTCAATCCGGTTGCGCAGTTTGTGGGCTCCA GTGTCGATGTCGTGGTGGGCGCCGGTTATAACATGACGCGCCACAGTTCCTTTGTCGGCCAATTCATGTGGGCCGGAATT CCGTTAAACAAGGATGCGCTGCGGCCGATCGTCCTCCTGGCGAACGCGCACGGCCTCAGTGCCTCCAGCAATCTTTGGGC GGTAAACGGCAACTACCGGTACTCGAGGGAGGGCAGAACGTTCGGCGCCTACTGGATCGGGGGCGGAGGCGTGTACTACC GCCGCGTCAGCCTTTCACGCAATGTCGTGTCGGGTACCGAGACCGTCTGCACTCCGACGTGGCAGTTCTTTGGCTATACC TGCGTCAATGGCAACGTGACCCAGGACGAAACCCTGATCACAGCCGGTTCAACGGCGTTCGGTGGAAACGGCGGCATGGG CTTCACCATCCGGATCAACGATGAGGGCTACAAGTTTTATGTGGAATCCCGCTATCACTATGCCCCGACCAAGAACGTCA GCACGCAGCTGATCGCGATCACGCTGGGCTTCGCCTGGTAG
Upstream 100 bases:
>100_bases CATTTTTGGGGCTTACCAGCTGAAGTTTGGGAGCAAAGCGACCAAATAAAGCGCCTCCGCTGGGGAACGCGCATCCGTAA ACGCGTGAAGGAGGTGGGTA
Downstream 100 bases:
>100_bases GAGGTAACGGGGAGTAACAGGATGCTTCTCGGACCAGCTTGCGCACGCATGCATCGAACAGTTGCAGAGGGGTGCGAACC CCGATCCGCCGACAGCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MGLGTTLSTSVIIIGAACTQVLCAQGSEFSKLNTNLGVGMTVPLNPVAQFVGSSVDVVVGAGYNMTRHSSFVGQFMWAGI PLNKDALRPIVLLANAHGLSASSNLWAVNGNYRYSREGRTFGAYWIGGGGVYYRRVSLSRNVVSGTETVCTPTWQFFGYT CVNGNVTQDETLITAGSTAFGGNGGMGFTIRINDEGYKFYVESRYHYAPTKNVSTQLIAITLGFAW
Sequences:
>Translated_226_residues MGLGTTLSTSVIIIGAACTQVLCAQGSEFSKLNTNLGVGMTVPLNPVAQFVGSSVDVVVGAGYNMTRHSSFVGQFMWAGI PLNKDALRPIVLLANAHGLSASSNLWAVNGNYRYSREGRTFGAYWIGGGGVYYRRVSLSRNVVSGTETVCTPTWQFFGYT CVNGNVTQDETLITAGSTAFGGNGGMGFTIRINDEGYKFYVESRYHYAPTKNVSTQLIAITLGFAW >Mature_225_residues GLGTTLSTSVIIIGAACTQVLCAQGSEFSKLNTNLGVGMTVPLNPVAQFVGSSVDVVVGAGYNMTRHSSFVGQFMWAGIP LNKDALRPIVLLANAHGLSASSNLWAVNGNYRYSREGRTFGAYWIGGGGVYYRRVSLSRNVVSGTETVCTPTWQFFGYTC VNGNVTQDETLITAGSTAFGGNGGMGFTIRINDEGYKFYVESRYHYAPTKNVSTQLIAITLGFAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24191; Mature: 24059
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLGTTLSTSVIIIGAACTQVLCAQGSEFSKLNTNLGVGMTVPLNPVAQFVGSSVDVVVG CCCCCCCCCEEEEEEHHHHHHHHHCCCCCCEECCCCCCEEEECCHHHHHHHCCCEEEEEE AGYNMTRHSSFVGQFMWAGIPLNKDALRPIVLLANAHGLSASSNLWAVNGNYRYSREGRT CCCCCCHHHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCCCCCCEEEECCCEEECCCCCE FGAYWIGGGGVYYRRVSLSRNVVSGTETVCTPTWQFFGYTCVNGNVTQDETLITAGSTAF EEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCHHEEEEEECCCCCCCCEEEEECCCEE GGNGGMGFTIRINDEGYKFYVESRYHYAPTKNVSTQLIAITLGFAW CCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECC >Mature Secondary Structure GLGTTLSTSVIIIGAACTQVLCAQGSEFSKLNTNLGVGMTVPLNPVAQFVGSSVDVVVG CCCCCCCCEEEEEEHHHHHHHHHCCCCCCEECCCCCCEEEECCHHHHHHHCCCEEEEEE AGYNMTRHSSFVGQFMWAGIPLNKDALRPIVLLANAHGLSASSNLWAVNGNYRYSREGRT CCCCCCHHHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCCCCCCEEEECCCEEECCCCCE FGAYWIGGGGVYYRRVSLSRNVVSGTETVCTPTWQFFGYTCVNGNVTQDETLITAGSTAF EEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCHHEEEEEECCCCCCCCEEEEECCCEE GGNGGMGFTIRINDEGYKFYVESRYHYAPTKNVSTQLIAITLGFAW CCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA