Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116622494

Identifier: 116622494

GI number: 116622494

Start: 4295901

End: 4296581

Strand: Direct

Name: 116622494

Synonym: Acid_3392

Alternate gene names: NA

Gene position: 4295901-4296581 (Clockwise)

Preceding gene: 116622493

Following gene: 116622496

Centisome position: 43.11

GC content: 60.79

Gene sequence:

>681_bases
ATGGCCGCGATCGCAAGTCCTACCCTGGCGCTGCTCCTGACCGCGGCGGCGCTTCCCCTGGCGGCGCAGAATTCGAGGGG
CGAATTCTGGCCGGAGCTCGATATCTTTGCGCAGAGGGGAGACCAGCTGCGCATCGCGTTTATCGACGGCTTCAAAAACC
AGAAGGCGGAGTTCGGCTGCTATCTCGATATCGCCCTCAAACCCCTGTTCCGCCGCGAGCTGCGCAATCGCGGCGATGTT
TTCCGGCAGCGCTTTCTGACGTTCCGCGCGGGGTATCAGTACACCACGCCGGTAGCCAACAACGATTCCAGCTCCGAGAA
CCGCGCCGTCGCCGAAGCCACGGCGAGGTACCCCCTGCCCGGGAAAGTGGTTGTTGTCGATCGCAACCGCGGCGACTTTC
GCTTCGTCAAAGGCCAGCCCTTCAGCATGAGATACCGGAACCGGCTCAGAATCGAGCGTGATCTTGAGTTATCCGGCATG
GTATTCACTCCCTTTGCCTACGACGAGACTTTTTATAGCACCAAATACGGCGCGTGGAATCGGAACCGGTATGCCGCGGG
CATCGAGTTTCCCGTGGGACCCCACGTGGTGGTGGCGCCCTATCTGCTTCGGCAGCGCGATACCCGCGCGTCCGTGAAGT
TCATCAACGCACTCGGCTTGACGTTGAGCCTGTTTTTCTGA

Upstream 100 bases:

>100_bases
GGTCTATATAACGGTGCCTCAGCGGCCCGGACGCAATGCCCGGGCGTCGACCGTGTCCAACCCGGACCGGGGAGACTGAC
ACTGCCCCTCTAAGGCTGTA

Downstream 100 bases:

>100_bases
GAGAGCTACTTCTTCTTCCGGGCCTTGCGCTTCGTTTGCATGCGATTCGCGCTGCTTCTGGGTTTGGATGCGAAGTAACT
GGGACGGGTATGCACCTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MAAIASPTLALLLTAAALPLAAQNSRGEFWPELDIFAQRGDQLRIAFIDGFKNQKAEFGCYLDIALKPLFRRELRNRGDV
FRQRFLTFRAGYQYTTPVANNDSSSENRAVAEATARYPLPGKVVVVDRNRGDFRFVKGQPFSMRYRNRLRIERDLELSGM
VFTPFAYDETFYSTKYGAWNRNRYAAGIEFPVGPHVVVAPYLLRQRDTRASVKFINALGLTLSLFF

Sequences:

>Translated_226_residues
MAAIASPTLALLLTAAALPLAAQNSRGEFWPELDIFAQRGDQLRIAFIDGFKNQKAEFGCYLDIALKPLFRRELRNRGDV
FRQRFLTFRAGYQYTTPVANNDSSSENRAVAEATARYPLPGKVVVVDRNRGDFRFVKGQPFSMRYRNRLRIERDLELSGM
VFTPFAYDETFYSTKYGAWNRNRYAAGIEFPVGPHVVVAPYLLRQRDTRASVKFINALGLTLSLFF
>Mature_225_residues
AAIASPTLALLLTAAALPLAAQNSRGEFWPELDIFAQRGDQLRIAFIDGFKNQKAEFGCYLDIALKPLFRRELRNRGDVF
RQRFLTFRAGYQYTTPVANNDSSSENRAVAEATARYPLPGKVVVVDRNRGDFRFVKGQPFSMRYRNRLRIERDLELSGMV
FTPFAYDETFYSTKYGAWNRNRYAAGIEFPVGPHVVVAPYLLRQRDTRASVKFINALGLTLSLFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25783; Mature: 25652

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIASPTLALLLTAAALPLAAQNSRGEFWPELDIFAQRGDQLRIAFIDGFKNQKAEFGC
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCEE
YLDIALKPLFRRELRNRGDVFRQRFLTFRAGYQYTTPVANNDSSSENRAVAEATARYPLP
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCC
GKVVVVDRNRGDFRFVKGQPFSMRYRNRLRIERDLELSGMVFTPFAYDETFYSTKYGAWN
CEEEEEECCCCCEEEECCCCCCCHHHHHCCEEECCCCCCEEEECEECCCCEECCCCCCCC
RNRYAAGIEFPVGPHVVVAPYLLRQRDTRASVKFINALGLTLSLFF
CCEEEEEECCCCCCCEEEHHHHHHCCCCHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure 
AAIASPTLALLLTAAALPLAAQNSRGEFWPELDIFAQRGDQLRIAFIDGFKNQKAEFGC
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCCEE
YLDIALKPLFRRELRNRGDVFRQRFLTFRAGYQYTTPVANNDSSSENRAVAEATARYPLP
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCCCC
GKVVVVDRNRGDFRFVKGQPFSMRYRNRLRIERDLELSGMVFTPFAYDETFYSTKYGAWN
CEEEEEECCCCCEEEECCCCCCCHHHHHCCEEECCCCCCEEEECEECCCCEECCCCCCCC
RNRYAAGIEFPVGPHVVVAPYLLRQRDTRASVKFINALGLTLSLFF
CCEEEEEECCCCCCCEEEHHHHHHCCCCHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA