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The map label for this gene is yhjL [C]

Identifier: 116622427

GI number: 116622427

Start: 4207450

End: 4209801

Strand: Direct

Name: yhjL [C]

Synonym: Acid_3324

Alternate gene names: 116622427

Gene position: 4207450-4209801 (Clockwise)

Preceding gene: 116622426

Following gene: 116622428

Centisome position: 42.22

GC content: 58.97

Gene sequence:

>2352_bases
ATGCGTTCCATTCGATTCGTTGCGTTGATTTTGGCAGTGCTGGTAGGCTTGGTGTCGTGCAGCCGCGACCCGGCCGTGGT
CAAGAAACGCTATTTCGAAAGCGGCAATAAGTATTTCGACAAGGGGCGTTATAAGGAAGCCTCAATTCAATATCGCAATG
CCCTGAAGCGCGACGGGAAGTACGGTCCGGCGCACTATAAACTGGCACTCGTCAGCCTGAAGGTCGGCGATGTGGGCGGA
GCGATCGGGTCACTGCGGCGCGCGATCGAACTTTTGCCGCCGGATTCACCCGACCACTGGGACGCGGTGGTCAAGTTGAC
GGAAATCTACCTCGCCGTAGCCAGGGGCGAGAAGCAGTGGATGGACGAAGTCGAGAAGTTCACGAAGGACCTGCTCAAGC
GCGACCCGAACTCGTACGATGCGCACAGGCTGATCGGCGATTTGAATTTCAGCCGCGCCACCGACGCTTACAAGAATAAG
CATCCGGATGAGGGGCAGGAGTTCCTGAATACCGCGACCGAGGAATACCGGAGAGCCGACAGCATCAAACCGGGGCAGCA
GGGAGTGATGATGCAGCTGGCGCGAGCGCTATCGGCGAGAGGCGATTTCGCCGGCGCCGAGCGTCTTTACCGGCAGGTGA
TCGAGAAGGACAAATCCTACCAGTTCGCGTACACCGAGCTCTACCGCATATTTCTGTTTCAGAACAAACCGGCGCAAGCG
GAAGCGATGCTGAAGGAGGCGTATCAGAACAATCCCAAACAGTACGGCTTCCTCACGCTGCTGGCGATGCACTACTACGG
ACAGCAGCGCCGCGACGACATGGTGAGCGTTCTGAACCAGATCAAGAGCCATTCGAAGGACTTTGACCAGGCCTATCTGA
CGGTCGGCGATTTCTACCTGCGCATGGGCGACGGCGATTCGGCGATCCGCGAATACAAGGAAGGCATACTCAAGGACCCG
AAGAAGAAGCTGACCTACCAGAAACGGGTGATTGAAGTTCTGATGCGGCAGGGCAAGCGTTCCGACGCGGCCGAAGTGAA
TGCGCAGATCCTGAAGGAAGTTCCGGACGATAACGATGCGCGCGGCCTCTCGGCGACGTTCCTGCTGGACAAGGGCGACG
TGGCCAAGGCGCTGCAGGAATTGCAGGCAGTGGTCACGCGGGCTCCGGAGAATCCGGTTTCGCGCTACAACCTGGGCCGG
GCGCACGCCGCGCGCGGCGAATGGGAACAGGCCCGCCAGCAGTTCGCGAAGGCAATCGAGCTGCGGCCGGACTACGTGCT
GGCGCGGCTGGCGCTGGCGCAACTGCAGGTGACGCGCGGCGAATTTGAAGCGGCGCTGAAGACGGCGGAAGAGATTCTAA
AATTCGACAAAGGCAACGTCAATGCGCGCCTGATTGAATCCGCGGCGCTGATGGGCCAGAAGAAGTTCGGCGATTCCAGG
GTCATGCTGGACGCGATGTTGAAGACAAACCCGGGCTCTCCCGACGTGTTGTTCCAACTGGGCGTGGTCAACCTGGCCGA
GAACAAGTTCAAGGAAGCCGAAGACTCTTTCCGGCGGGCGTATCAGTTAAACCCGGCCAATTCGCGCGGCTTGATGGGTA
TTGTCGAGACCAACATGGCGCAGAACAAGACCGAGGAAGCGGTCAAGCTGTTGCAGGCGGAGAGCGACAAGTCGCCGAAC
CGGACGGATTTGCTCACCGCCCTGGGCAACACGGCAGTGCGCGCCGGGAAGTACGACTTCGCGATCCAGACCTTCAACCG
GGTGCTGGAGCAGACGGATAAGGGCAAGGCGCAAGGCGATATCTACCTGCGGCTGGGAGAGACATACCGGCGCAAGGGAG
ATTTGAACGGCGCGATTCAGGCGCTGCAGAAGGCGCGCGAGAGTCTGCCGGACAACATCATCGTGCTGAGCACGCTGGCG
CTGGTGCTGGATGCGGCATCGCGCCGGCCGGAGGCGAAGCAGGTCTACGAGGCCACAATCAAACTGGATCCGAACAACGC
CGTGGCGCTCAACAATCTGGCGTTCATGATGGCAGAAAGCGGCGGCGACCTGGACGAAGCGTTGACCAAGGCGCAGCGCG
CCAAGCAACTGCTACCGAACCTATTCGAGATTTCGGATACATTGGGTTGGATTTACCTGAAGAAGAACCTGGCGGCCAAC
GCCATCGACATCTTTAAAGACCTGGTGAACAAGCAGCCGAATCACTCGACCTATCACTACCATCTGGCGATGGCGTACTC
GCAGCAGGGCGACAAATCCAAAGCCCTGGAACAACTGAAAGAGGCGCTGAAATACAATCCGGACAAGGGTGAGAAGGAAA
AGATTCAGCAGCTGATCACACGGTTGGGGTAG

Upstream 100 bases:

>100_bases
GTACTGGTATAATACTGAAGTTTCGCGATTTGCCACCTTCAGGTATGGCATCCGCCAGTGGTCTGGCTTAGAGTAGAAAA
GACATTTGTCAGAGGATTTC

Downstream 100 bases:

>100_bases
TACGAGAACCGGGCCGGCGAGGCGGAGGCTTCGCCGGTGCACCCGCACCCGAAAGCCTCCGCCTGCCCGAATCCCGCTGT
ACGCCGGCCAATGTTGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 783; Mature: 783

Protein sequence:

>783_residues
MRSIRFVALILAVLVGLVSCSRDPAVVKKRYFESGNKYFDKGRYKEASIQYRNALKRDGKYGPAHYKLALVSLKVGDVGG
AIGSLRRAIELLPPDSPDHWDAVVKLTEIYLAVARGEKQWMDEVEKFTKDLLKRDPNSYDAHRLIGDLNFSRATDAYKNK
HPDEGQEFLNTATEEYRRADSIKPGQQGVMMQLARALSARGDFAGAERLYRQVIEKDKSYQFAYTELYRIFLFQNKPAQA
EAMLKEAYQNNPKQYGFLTLLAMHYYGQQRRDDMVSVLNQIKSHSKDFDQAYLTVGDFYLRMGDGDSAIREYKEGILKDP
KKKLTYQKRVIEVLMRQGKRSDAAEVNAQILKEVPDDNDARGLSATFLLDKGDVAKALQELQAVVTRAPENPVSRYNLGR
AHAARGEWEQARQQFAKAIELRPDYVLARLALAQLQVTRGEFEAALKTAEEILKFDKGNVNARLIESAALMGQKKFGDSR
VMLDAMLKTNPGSPDVLFQLGVVNLAENKFKEAEDSFRRAYQLNPANSRGLMGIVETNMAQNKTEEAVKLLQAESDKSPN
RTDLLTALGNTAVRAGKYDFAIQTFNRVLEQTDKGKAQGDIYLRLGETYRRKGDLNGAIQALQKARESLPDNIIVLSTLA
LVLDAASRRPEAKQVYEATIKLDPNNAVALNNLAFMMAESGGDLDEALTKAQRAKQLLPNLFEISDTLGWIYLKKNLAAN
AIDIFKDLVNKQPNHSTYHYHLAMAYSQQGDKSKALEQLKEALKYNPDKGEKEKIQQLITRLG

Sequences:

>Translated_783_residues
MRSIRFVALILAVLVGLVSCSRDPAVVKKRYFESGNKYFDKGRYKEASIQYRNALKRDGKYGPAHYKLALVSLKVGDVGG
AIGSLRRAIELLPPDSPDHWDAVVKLTEIYLAVARGEKQWMDEVEKFTKDLLKRDPNSYDAHRLIGDLNFSRATDAYKNK
HPDEGQEFLNTATEEYRRADSIKPGQQGVMMQLARALSARGDFAGAERLYRQVIEKDKSYQFAYTELYRIFLFQNKPAQA
EAMLKEAYQNNPKQYGFLTLLAMHYYGQQRRDDMVSVLNQIKSHSKDFDQAYLTVGDFYLRMGDGDSAIREYKEGILKDP
KKKLTYQKRVIEVLMRQGKRSDAAEVNAQILKEVPDDNDARGLSATFLLDKGDVAKALQELQAVVTRAPENPVSRYNLGR
AHAARGEWEQARQQFAKAIELRPDYVLARLALAQLQVTRGEFEAALKTAEEILKFDKGNVNARLIESAALMGQKKFGDSR
VMLDAMLKTNPGSPDVLFQLGVVNLAENKFKEAEDSFRRAYQLNPANSRGLMGIVETNMAQNKTEEAVKLLQAESDKSPN
RTDLLTALGNTAVRAGKYDFAIQTFNRVLEQTDKGKAQGDIYLRLGETYRRKGDLNGAIQALQKARESLPDNIIVLSTLA
LVLDAASRRPEAKQVYEATIKLDPNNAVALNNLAFMMAESGGDLDEALTKAQRAKQLLPNLFEISDTLGWIYLKKNLAAN
AIDIFKDLVNKQPNHSTYHYHLAMAYSQQGDKSKALEQLKEALKYNPDKGEKEKIQQLITRLG
>Mature_783_residues
MRSIRFVALILAVLVGLVSCSRDPAVVKKRYFESGNKYFDKGRYKEASIQYRNALKRDGKYGPAHYKLALVSLKVGDVGG
AIGSLRRAIELLPPDSPDHWDAVVKLTEIYLAVARGEKQWMDEVEKFTKDLLKRDPNSYDAHRLIGDLNFSRATDAYKNK
HPDEGQEFLNTATEEYRRADSIKPGQQGVMMQLARALSARGDFAGAERLYRQVIEKDKSYQFAYTELYRIFLFQNKPAQA
EAMLKEAYQNNPKQYGFLTLLAMHYYGQQRRDDMVSVLNQIKSHSKDFDQAYLTVGDFYLRMGDGDSAIREYKEGILKDP
KKKLTYQKRVIEVLMRQGKRSDAAEVNAQILKEVPDDNDARGLSATFLLDKGDVAKALQELQAVVTRAPENPVSRYNLGR
AHAARGEWEQARQQFAKAIELRPDYVLARLALAQLQVTRGEFEAALKTAEEILKFDKGNVNARLIESAALMGQKKFGDSR
VMLDAMLKTNPGSPDVLFQLGVVNLAENKFKEAEDSFRRAYQLNPANSRGLMGIVETNMAQNKTEEAVKLLQAESDKSPN
RTDLLTALGNTAVRAGKYDFAIQTFNRVLEQTDKGKAQGDIYLRLGETYRRKGDLNGAIQALQKARESLPDNIIVLSTLA
LVLDAASRRPEAKQVYEATIKLDPNNAVALNNLAFMMAESGGDLDEALTKAQRAKQLLPNLFEISDTLGWIYLKKNLAAN
AIDIFKDLVNKQPNHSTYHYHLAMAYSQQGDKSKALEQLKEALKYNPDKGEKEKIQQLITRLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=453, Percent_Identity=21.1920529801325, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI32307150, Length=372, Percent_Identity=22.3118279569892, Blast_Score=83, Evalue=1e-15,
Organism=Homo sapiens, GI83415184, Length=283, Percent_Identity=23.6749116607774, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI301336134, Length=283, Percent_Identity=24.0282685512367, Blast_Score=68, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=372, Percent_Identity=21.505376344086, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115532690, Length=372, Percent_Identity=21.505376344086, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17647755, Length=382, Percent_Identity=22.2513089005236, Blast_Score=80, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24585827, Length=382, Percent_Identity=22.2513089005236, Blast_Score=80, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24585829, Length=382, Percent_Identity=22.2513089005236, Blast_Score=80, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 88196; Mature: 88196

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIRFVALILAVLVGLVSCSRDPAVVKKRYFESGNKYFDKGRYKEASIQYRNALKRDGK
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCC
YGPAHYKLALVSLKVGDVGGAIGSLRRAIELLPPDSPDHWDAVVKLTEIYLAVARGEKQW
CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
MDEVEKFTKDLLKRDPNSYDAHRLIGDLNFSRATDAYKNKHPDEGQEFLNTATEEYRRAD
HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
SIKPGQQGVMMQLARALSARGDFAGAERLYRQVIEKDKSYQFAYTELYRIFLFQNKPAQA
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHH
EAMLKEAYQNNPKQYGFLTLLAMHYYGQQRRDDMVSVLNQIKSHSKDFDQAYLTVGDFYL
HHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEE
RMGDGDSAIREYKEGILKDPKKKLTYQKRVIEVLMRQGKRSDAAEVNAQILKEVPDDNDA
EECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
RGLSATFLLDKGDVAKALQELQAVVTRAPENPVSRYNLGRAHAARGEWEQARQQFAKAIE
CCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCCCHHHHHHHHHHHHH
LRPDYVLARLALAQLQVTRGEFEAALKTAEEILKFDKGNVNARLIESAALMGQKKFGDSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH
VMLDAMLKTNPGSPDVLFQLGVVNLAENKFKEAEDSFRRAYQLNPANSRGLMGIVETNMA
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEHHCCHH
QNKTEEAVKLLQAESDKSPNRTDLLTALGNTAVRAGKYDFAIQTFNRVLEQTDKGKAQGD
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
IYLRLGETYRRKGDLNGAIQALQKARESLPDNIIVLSTLALVLDAASRRPEAKQVYEATI
EEEEECHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHE
KLDPNNAVALNNLAFMMAESGGDLDEALTKAQRAKQLLPNLFEISDTLGWIYLKKNLAAN
EECCCCCEEECHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHH
AIDIFKDLVNKQPNHSTYHYHLAMAYSQQGDKSKALEQLKEALKYNPDKGEKEKIQQLIT
HHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RLG
HCC
>Mature Secondary Structure
MRSIRFVALILAVLVGLVSCSRDPAVVKKRYFESGNKYFDKGRYKEASIQYRNALKRDGK
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCC
YGPAHYKLALVSLKVGDVGGAIGSLRRAIELLPPDSPDHWDAVVKLTEIYLAVARGEKQW
CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
MDEVEKFTKDLLKRDPNSYDAHRLIGDLNFSRATDAYKNKHPDEGQEFLNTATEEYRRAD
HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
SIKPGQQGVMMQLARALSARGDFAGAERLYRQVIEKDKSYQFAYTELYRIFLFQNKPAQA
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHH
EAMLKEAYQNNPKQYGFLTLLAMHYYGQQRRDDMVSVLNQIKSHSKDFDQAYLTVGDFYL
HHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEE
RMGDGDSAIREYKEGILKDPKKKLTYQKRVIEVLMRQGKRSDAAEVNAQILKEVPDDNDA
EECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
RGLSATFLLDKGDVAKALQELQAVVTRAPENPVSRYNLGRAHAARGEWEQARQQFAKAIE
CCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCCCHHHHHHHHHHHHH
LRPDYVLARLALAQLQVTRGEFEAALKTAEEILKFDKGNVNARLIESAALMGQKKFGDSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH
VMLDAMLKTNPGSPDVLFQLGVVNLAENKFKEAEDSFRRAYQLNPANSRGLMGIVETNMA
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEHHCCHH
QNKTEEAVKLLQAESDKSPNRTDLLTALGNTAVRAGKYDFAIQTFNRVLEQTDKGKAQGD
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
IYLRLGETYRRKGDLNGAIQALQKARESLPDNIIVLSTLALVLDAASRRPEAKQVYEATI
EEEEECHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHE
KLDPNNAVALNNLAFMMAESGGDLDEALTKAQRAKQLLPNLFEISDTLGWIYLKKNLAAN
EECCCCCEEECHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHH
AIDIFKDLVNKQPNHSTYHYHLAMAYSQQGDKSKALEQLKEALKYNPDKGEKEKIQQLIT
HHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RLG
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 9697413 [H]