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The map label for this gene is 116622413

Identifier: 116622413

GI number: 116622413

Start: 4186900

End: 4188093

Strand: Reverse

Name: 116622413

Synonym: Acid_3308

Alternate gene names: NA

Gene position: 4188093-4186900 (Counterclockwise)

Preceding gene: 116622417

Following gene: 116622411

Centisome position: 42.03

GC content: 59.05

Gene sequence:

>1194_bases
ATGAACCGGCCACCCTTCGAGGTGGCCGATATCATCCGACAATACGGCAACAGCTTCATCCGAAAGCACCGGTCCTGGTT
GACGTGGCTTCATCTCCGCGTTCTTTATGCCATCGAGTTTTGCCGCACGGCAAAACTCGGTGGCCACCTGGACCGCTGTT
CCCGATGTGGCCATGAGGCCATCTCGTTTTGCTCCTGCCGCAACCGGCATTGTCCGAAATGCCAGACCAATGCTCGCGAC
AAGTGGCTCGCCGGGCGCAGCAAAGAACTGCTGCCGACCAGCTACGTGCATGTCGTCTTCACCATCCCCCACGAGCTTTC
GTGGCTGGCGTTGCAGAATAAGAAAGTCGTCTATGACCTCTTGTTCCGCACCAGCGCCGCGACCCTGTTGGAGGTTGCCG
CCGATCCGAAACATCTCGGCGCGGAGATCGGCTTCCTCAGTGTGCTCCACACCTGGGGCCAGACCCTACAACATCATCCG
CACATCCATTGCGTGATCCCTTCCGGTGGCCTGTCGCCCGATCACCAACACTGGGTTCACCCGCGTTACCCGTTCTTCCT
GCCGGTGCCGGTACTCCGTCGCGTCTTTCGTGGCAAGTTCGTCGCCGGCCTGAAGTCCGCCTTCCATCAAGGCAAACTCG
TATTCCCCGGCAGCCTCCAACCACTGGCCGTGGAGAAATCCTTTGCCAAATTCTTGCGACCGCTCTTTCGTAAGGAGTGG
GTGGTCTACGCCAAGCGCCCCTTCGGCGGACCGGAACACGTTCTCCACTACCTGGCACGCTACACACACCGCGTCGCCAT
TTCCAATCATCGACTCCTGTCCGTGGCTGACGGCAAGGTCACTTTCCGCTGGAAGGACTACGCTCAGGGCAGCAAGCAAC
GCAAGATGACGGTCACCGCCGAAGAGTTCCTGCGGCGATTCATGCTCCACGTTCTCCCGCTCGGATTCGTCCGGATACGC
TTTTCCGGCTTTCTCGCGAATCGGTGCAGGAAGCAACTGCTACCGCTCTGCCAGACCTTGCTGGGAGCCAGGACAACACA
ACCATCAGAGACCCTCGGAAGTAGCGAGACCAAGTCTCTGGCAGCTTGGCATTGCCCTTGTTGTGGTGGCGACATGGTCG
TCGTCGAGAAACTTACCGGTCAACAGATCCGACGGAGATCTGTTGACCGGAAGCACCTCGTTGACAGTTCGTAG

Upstream 100 bases:

>100_bases
ATCTCTCGCGGAAGCACCTCACCGCCGTGGCCAACCCGCTAGACACGATCGCCGTGTCCAGCCCGGATAACATCAAGCTC
TCCCGGAAGAAGCAGAAGCC

Downstream 100 bases:

>100_bases
CCGGCTTTCACTCTCGGACCTAGAGCGTGCTTTCGCACGTGCGTTCCACGTGTGCCCGTACCGGCGGCCACGCGTCCAAC
GTGCCGGAAAACGTGGCCCA

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNRPPFEVADIIRQYGNSFIRKHRSWLTWLHLRVLYAIEFCRTAKLGGHLDRCSRCGHEAISFCSCRNRHCPKCQTNARD
KWLAGRSKELLPTSYVHVVFTIPHELSWLALQNKKVVYDLLFRTSAATLLEVAADPKHLGAEIGFLSVLHTWGQTLQHHP
HIHCVIPSGGLSPDHQHWVHPRYPFFLPVPVLRRVFRGKFVAGLKSAFHQGKLVFPGSLQPLAVEKSFAKFLRPLFRKEW
VVYAKRPFGGPEHVLHYLARYTHRVAISNHRLLSVADGKVTFRWKDYAQGSKQRKMTVTAEEFLRRFMLHVLPLGFVRIR
FSGFLANRCRKQLLPLCQTLLGARTTQPSETLGSSETKSLAAWHCPCCGGDMVVVEKLTGQQIRRRSVDRKHLVDSS

Sequences:

>Translated_397_residues
MNRPPFEVADIIRQYGNSFIRKHRSWLTWLHLRVLYAIEFCRTAKLGGHLDRCSRCGHEAISFCSCRNRHCPKCQTNARD
KWLAGRSKELLPTSYVHVVFTIPHELSWLALQNKKVVYDLLFRTSAATLLEVAADPKHLGAEIGFLSVLHTWGQTLQHHP
HIHCVIPSGGLSPDHQHWVHPRYPFFLPVPVLRRVFRGKFVAGLKSAFHQGKLVFPGSLQPLAVEKSFAKFLRPLFRKEW
VVYAKRPFGGPEHVLHYLARYTHRVAISNHRLLSVADGKVTFRWKDYAQGSKQRKMTVTAEEFLRRFMLHVLPLGFVRIR
FSGFLANRCRKQLLPLCQTLLGARTTQPSETLGSSETKSLAAWHCPCCGGDMVVVEKLTGQQIRRRSVDRKHLVDSS
>Mature_397_residues
MNRPPFEVADIIRQYGNSFIRKHRSWLTWLHLRVLYAIEFCRTAKLGGHLDRCSRCGHEAISFCSCRNRHCPKCQTNARD
KWLAGRSKELLPTSYVHVVFTIPHELSWLALQNKKVVYDLLFRTSAATLLEVAADPKHLGAEIGFLSVLHTWGQTLQHHP
HIHCVIPSGGLSPDHQHWVHPRYPFFLPVPVLRRVFRGKFVAGLKSAFHQGKLVFPGSLQPLAVEKSFAKFLRPLFRKEW
VVYAKRPFGGPEHVLHYLARYTHRVAISNHRLLSVADGKVTFRWKDYAQGSKQRKMTVTAEEFLRRFMLHVLPLGFVRIR
FSGFLANRCRKQLLPLCQTLLGARTTQPSETLGSSETKSLAAWHCPCCGGDMVVVEKLTGQQIRRRSVDRKHLVDSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007069 [H]

Pfam domain/function: PF04986 Transposase_32 [H]

EC number: NA

Molecular weight: Translated: 45545; Mature: 45545

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HEEECCCCCCCEEEEEHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure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HEEECCCCCCCEEEEEHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]