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The map label for this gene is ydcE [C]

Identifier: 116622407

GI number: 116622407

Start: 4182149

End: 4182391

Strand: Reverse

Name: ydcE [C]

Synonym: Acid_3302

Alternate gene names: 116622407

Gene position: 4182391-4182149 (Counterclockwise)

Preceding gene: 116622408

Following gene: 116622406

Centisome position: 41.97

GC content: 50.62

Gene sequence:

>243_bases
ATGCCACACATCGTTGTGAAGCTATGGCCAGGCAAGTCCGAGAATCAGAAGCAGCGTCTGGCCGACGCGATTACCAAAGA
CGTAATAGAAATTCTGAACTATAGCGAAAAATCCATTTCTGTGGCGATGCAGGAAGTGAAGGCTGAGGATTGGGCAGTCG
AGGTGTACAGACCCGAGGTCCAGGGCAACATCGACCAACTCTACAAAAAGCCGGGATATGACGAGAGCGATCTTCCCACA
TGA

Upstream 100 bases:

>100_bases
AGGACAGCCCGTATCTCAACCCGATGATCGGCGCGCAGGCGCGCTCCGCAACGGTTGAGGTTACACCGCGCGACACGAAC
TCGAAAAAGGAGATCGACTA

Downstream 100 bases:

>100_bases
GAACTGTCGCACTGCTCGTGTTGCTGCCGCTGTTTGCCGGGGCTCAAAGTGAGCGTCCGATGAAAGGAAGGAAATTGCAA
CCGATGCCACTACAAGATAA

Product: 4-oxalocrotonate tautomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MPHIVVKLWPGKSENQKQRLADAITKDVIEILNYSEKSISVAMQEVKAEDWAVEVYRPEVQGNIDQLYKKPGYDESDLPT

Sequences:

>Translated_80_residues
MPHIVVKLWPGKSENQKQRLADAITKDVIEILNYSEKSISVAMQEVKAEDWAVEVYRPEVQGNIDQLYKKPGYDESDLPT
>Mature_79_residues
PHIVVKLWPGKSENQKQRLADAITKDVIEILNYSEKSISVAMQEVKAEDWAVEVYRPEVQGNIDQLYKKPGYDESDLPT

Specific function: Unknown

COG id: COG1942

COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-oxalocrotonate tautomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004370
- InterPro:   IPR014347
- InterPro:   IPR017284 [H]

Pfam domain/function: PF01361 Tautomerase [H]

EC number: 5.3.2.- [C]

Molecular weight: Translated: 9174; Mature: 9043

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHIVVKLWPGKSENQKQRLADAITKDVIEILNYSEKSISVAMQEVKAEDWAVEVYRPEV
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCC
QGNIDQLYKKPGYDESDLPT
CCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PHIVVKLWPGKSENQKQRLADAITKDVIEILNYSEKSISVAMQEVKAEDWAVEVYRPEV
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCC
QGNIDQLYKKPGYDESDLPT
CCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]