| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622383
Identifier: 116622383
GI number: 116622383
Start: 4147166
End: 4147948
Strand: Direct
Name: 116622383
Synonym: Acid_3277
Alternate gene names: NA
Gene position: 4147166-4147948 (Clockwise)
Preceding gene: 116622382
Following gene: 116622385
Centisome position: 41.61
GC content: 66.67
Gene sequence:
>783_bases ATGACGGTCACGGATTTTCTGGAGAAGTGGGGACGGACGTTGTTCGAAGGTCCGCTGGCGCGGACCGGTCCGCTGGAGAG CCCGCGAGAGCTGGCGGAGATCCGCTTCGCGGTGCTGGAGGAGGTGCGGCGCCACTCCTACCGTGCGGGTGCGCGGATGG TCTTTCCGTTCGACCTGGTGCGCGTGACGATGCGCGGAGTGGAGGAGAACCGCGCGACGGTGTTCCGCAGCGCGTTCTTC CGGCAATATCTGGAGCACGAAATCCAGGGAAAACTGCGCGCCGACGGAGTGCGGTTTCCGGAGCGCCTGCAGGCTCAGGT GGAGGTCGGGACGGGCCTCCCGCAGGCCAACGAGCCGTGGTTGACGGTGGCCGCGGGGTCGCAGGAGGAAGCGGCGGCTG CGAAGCGTCCGGCGCGCCTGGTGGTGCGCGCGGGGAGCGCGAATGCAGCCGAATTGACGCTCGAAAAATCGCGCGTGCAT ATCGGGCGTGAAGTGGATGTCTACCGGCAGGGAGGCATTCACCGTCGCAATGACCTGGCGTTCGCCGAGGACAGCGAAGC CAACCGCTCGGTGTCGCGCGAGCATGCGCACATCGACCACGACCGGAAGACCGGCGAGTACCGCTTGTTCAACGACCGCT GGTACGCGCCTGGCACGGACTGCGGAACGCGAATCGTGCGCGACGGAGTCAGCCGCGAGGTGCCGCGCGACACGCGCGGA ACGAGATTGGAAGACGGCGACGAAATTCACCTGGGACGCGCGGTGCTTATCTTCGAAGCGTAG
Upstream 100 bases:
>100_bases TGGCCTTTGCGGTGATCGTGGAGAACGGCGGCTACGGCGGCAGAACTGCGGCGCCGATCGCGCGTGAAATCGTGGAGGCG GCGAAGGAGTTGGGTTTGCT
Downstream 100 bases:
>100_bases GTGGGAGCGGTCGCCCACCGCCCCCACCAACCTCCTTCCGCTGGAGAACCTCCCGCGGGGAGCTCAAATAAATCCGTTCA ATAGCGATTGCCGGATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTVTDFLEKWGRTLFEGPLARTGPLESPRELAEIRFAVLEEVRRHSYRAGARMVFPFDLVRVTMRGVEENRATVFRSAFF RQYLEHEIQGKLRADGVRFPERLQAQVEVGTGLPQANEPWLTVAAGSQEEAAAAKRPARLVVRAGSANAAELTLEKSRVH IGREVDVYRQGGIHRRNDLAFAEDSEANRSVSREHAHIDHDRKTGEYRLFNDRWYAPGTDCGTRIVRDGVSREVPRDTRG TRLEDGDEIHLGRAVLIFEA
Sequences:
>Translated_260_residues MTVTDFLEKWGRTLFEGPLARTGPLESPRELAEIRFAVLEEVRRHSYRAGARMVFPFDLVRVTMRGVEENRATVFRSAFF RQYLEHEIQGKLRADGVRFPERLQAQVEVGTGLPQANEPWLTVAAGSQEEAAAAKRPARLVVRAGSANAAELTLEKSRVH IGREVDVYRQGGIHRRNDLAFAEDSEANRSVSREHAHIDHDRKTGEYRLFNDRWYAPGTDCGTRIVRDGVSREVPRDTRG TRLEDGDEIHLGRAVLIFEA >Mature_259_residues TVTDFLEKWGRTLFEGPLARTGPLESPRELAEIRFAVLEEVRRHSYRAGARMVFPFDLVRVTMRGVEENRATVFRSAFFR QYLEHEIQGKLRADGVRFPERLQAQVEVGTGLPQANEPWLTVAAGSQEEAAAAKRPARLVVRAGSANAAELTLEKSRVHI GREVDVYRQGGIHRRNDLAFAEDSEANRSVSREHAHIDHDRKTGEYRLFNDRWYAPGTDCGTRIVRDGVSREVPRDTRGT RLEDGDEIHLGRAVLIFEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29490; Mature: 29359
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTDFLEKWGRTLFEGPLARTGPLESPRELAEIRFAVLEEVRRHSYRAGARMVFPFDLV CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHH RVTMRGVEENRATVFRSAFFRQYLEHEIQGKLRADGVRFPERLQAQVEVGTGLPQANEPW HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHCCCCCCCCCCCE LTVAAGSQEEAAAAKRPARLVVRAGSANAAELTLEKSRVHIGREVDVYRQGGIHRRNDLA EEEECCCCHHHHHHCCCEEEEEECCCCCCEEEEEEHHHHHCCCEEEHHHCCCCCCCCCCC FAEDSEANRSVSREHAHIDHDRKTGEYRLFNDRWYAPGTDCGTRIVRDGVSREVPRDTRG CCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCC TRLEDGDEIHLGRAVLIFEA CCCCCCCEEEECEEEEEEEC >Mature Secondary Structure TVTDFLEKWGRTLFEGPLARTGPLESPRELAEIRFAVLEEVRRHSYRAGARMVFPFDLV CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHH RVTMRGVEENRATVFRSAFFRQYLEHEIQGKLRADGVRFPERLQAQVEVGTGLPQANEPW HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHCCCCCCCCCCCE LTVAAGSQEEAAAAKRPARLVVRAGSANAAELTLEKSRVHIGREVDVYRQGGIHRRNDLA EEEECCCCHHHHHHCCCEEEEEECCCCCCEEEEEEHHHHHCCCEEEHHHCCCCCCCCCCC FAEDSEANRSVSREHAHIDHDRKTGEYRLFNDRWYAPGTDCGTRIVRDGVSREVPRDTRG CCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCC TRLEDGDEIHLGRAVLIFEA CCCCCCCEEEECEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA