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The map label for this gene is 116622367

Identifier: 116622367

GI number: 116622367

Start: 4127850

End: 4128440

Strand: Direct

Name: 116622367

Synonym: Acid_3261

Alternate gene names: NA

Gene position: 4127850-4128440 (Clockwise)

Preceding gene: 116622363

Following gene: 116622368

Centisome position: 41.42

GC content: 62.27

Gene sequence:

>591_bases
ATGACCGGCCAGCGCTCGATAACGCTTCTGCTGCTTGAGTGGAACAACGGCAATCCTGCCGCGCTGGAGGAACTCACGCC
CCATGTGTACCGTGAGTTGCACACGCTCGCCCGGTGGTACCTGAGCCGGGGCGGCCCGAACCGGACGCTACAGCCCACCG
CGCTCATCAATGAGGTGTACCTGCGACTGATCGAGAATCGCCACCCCGTCGAATGGGAGAGCCGTTCTCATTTCATTGGC
ATCGCCGCACGGCTCATGCGCAATGTTCTGGTGGAGTGCTCCCGTTCCCGCGGTGCCGCAAAACGGGGCGGTTCGGCGAT
CGCCGTGACGCTCGACGAGACGGTAGTGCCCTCGTCCGGCCGTGGGCCCGATGTTCTGGAGTTGGACGAAGCGCTGGATC
GTCTCGCTCAGCGGGACGAGCGCAAAGCAAAGGTAATTGAGCTGCATTATTTCGGCGGCATGACGCGTGAAGAGATCGCC
GGCGCAATGAATCTGACGGTTGCGACGGTGAAACGCGACCTGCGCCTGGGTGAGGCATGGTTGCGGTGTCATTTGAGCGG
CGGGGATAGCGGGAGAAATGGGAGCCGATAA

Upstream 100 bases:

>100_bases
AATAGGACATTATCATTTTGCGGCGACACAAAGTTTCCAGCGCTGAGCGCTCACCGTGGCGCTCGGATATAATGATGCGA
CGATTTGGGGGGTGGCCCGA

Downstream 100 bases:

>100_bases
ATGGAGTCGCGTCGAAGACCTGTTCCATCAGGCCGTCGAACTTGCTCCCGCGGACCGGTCAAAGTTCTTGGAGTGCGCCT
GCGGCGGCGATTGCGAACTG

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: Sigma Factor ECF-Like Family Protein; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor; ECF Sigma Factor Family Protein; RNA Polymerase ECF-Type Sigma Factor; Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; Extracytoplasmic Sigma Factor ECF; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma-E Factor; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTGQRSITLLLLEWNNGNPAALEELTPHVYRELHTLARWYLSRGGPNRTLQPTALINEVYLRLIENRHPVEWESRSHFIG
IAARLMRNVLVECSRSRGAAKRGGSAIAVTLDETVVPSSGRGPDVLELDEALDRLAQRDERKAKVIELHYFGGMTREEIA
GAMNLTVATVKRDLRLGEAWLRCHLSGGDSGRNGSR

Sequences:

>Translated_196_residues
MTGQRSITLLLLEWNNGNPAALEELTPHVYRELHTLARWYLSRGGPNRTLQPTALINEVYLRLIENRHPVEWESRSHFIG
IAARLMRNVLVECSRSRGAAKRGGSAIAVTLDETVVPSSGRGPDVLELDEALDRLAQRDERKAKVIELHYFGGMTREEIA
GAMNLTVATVKRDLRLGEAWLRCHLSGGDSGRNGSR
>Mature_195_residues
TGQRSITLLLLEWNNGNPAALEELTPHVYRELHTLARWYLSRGGPNRTLQPTALINEVYLRLIENRHPVEWESRSHFIGI
AARLMRNVLVECSRSRGAAKRGGSAIAVTLDETVVPSSGRGPDVLELDEALDRLAQRDERKAKVIELHYFGGMTREEIAG
AMNLTVATVKRDLRLGEAWLRCHLSGGDSGRNGSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21890; Mature: 21759

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQRSITLLLLEWNNGNPAALEELTPHVYRELHTLARWYLSRGGPNRTLQPTALINEVY
CCCCCEEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LRLIENRHPVEWESRSHFIGIAARLMRNVLVECSRSRGAAKRGGSAIAVTLDETVVPSSG
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCEECCCCC
RGPDVLELDEALDRLAQRDERKAKVIELHYFGGMTREEIAGAMNLTVATVKRDLRLGEAW
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHH
LRCHLSGGDSGRNGSR
HEEECCCCCCCCCCCC
>Mature Secondary Structure 
TGQRSITLLLLEWNNGNPAALEELTPHVYRELHTLARWYLSRGGPNRTLQPTALINEVY
CCCCEEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LRLIENRHPVEWESRSHFIGIAARLMRNVLVECSRSRGAAKRGGSAIAVTLDETVVPSSG
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCEECCCCC
RGPDVLELDEALDRLAQRDERKAKVIELHYFGGMTREEIAGAMNLTVATVKRDLRLGEAW
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHH
LRCHLSGGDSGRNGSR
HEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA