| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622357
Identifier: 116622357
GI number: 116622357
Start: 4115049
End: 4115891
Strand: Reverse
Name: 116622357
Synonym: Acid_3251
Alternate gene names: NA
Gene position: 4115891-4115049 (Counterclockwise)
Preceding gene: 116622358
Following gene: 116622352
Centisome position: 41.3
GC content: 60.02
Gene sequence:
>843_bases GTGCGAGATTTTCGAGTTGTTTGGGCGATGATCGCGATGTGCGGCGTTTGCATGGCACAGGCGCCCGGGCGGGGTGCCGC GCCGGTGGCGCCGCCCGCGAATGGGAAGAAGCGGATTCTGGTGATCGGACAGACCAAGGGCTTCCAGCATGATTCGGTGC CGGTCGCGATGGCCAACATCTGGAAATGGGGACACGACACCGGGCTGTGGGAAGCATACCTGCGCACCGATACCGAGTTG ATCACCAGGAAGAAGCTCGAGGCCAATGCGAAGACGCTGCCCAACTTCGACGCAATCGTTTTTGCGAGCAGCACGGGCGA ACTGGACTTGAGCGACGAGCAGAAGGCCGACCTGCTGGCCTTCGTCCACGATGACGGAAAGGGCTACGTCGGCGTCCACG CTTCGAACGACGCCAATTACAAATGGAACGAATGGGCGCTGTTGACCGGCGGCTGGTTCGACCAGCATCCGTGGAATACC TTCGAGGCGCCGATTATCAGCGAGGACTCCGAATTTCCGGCGACGCGGCATTTCCCCAAAGCGTTCATGAAGCGCGATGA AATCTATCAGCTGAAGAATTTTTCGCGCGACAACGTGAACGTACTGTTGCGGCTGGACGAGACCAAGCTGAACTACGACA ACAACCCGCGCGTGCATCGCGAGGACCGCGATTTCGCGGTGGCGTACTCGAAGATGTACGGCAAGGGGCGCGTCTTCTAT TCCACGCTGGGGCACACCAACGAGAGCTGGGACGATCCCGACATTCAGAAGATGTACTTCGAAGCCATCCGCTGGGCGCT CGGCCTGACGGAAGGCAGCACGAAGTCGCACCCGAAGCGGTGA
Upstream 100 bases:
>100_bases CACGTTTTCGCTGGGCGGTAAGGCGGGGACGCAGACGCTGATACTGCCGGTCGGGAACTAGCCGGCGAAAGGGATTACAA TCTTGCTCGAAGGAGAACTC
Downstream 100 bases:
>100_bases CTACAGCGCCTGTTCCAGGTCGGCGATGATGTCCTCGGCCGCTTCGATGCCGGTGGAGAGGCGCACGAGGTTGTCGCGGA TGCCCATCCGCAGGCGGTGC
Product: glycosyl hydrolase
Products: NA
Alternate protein names: Secreted Glycosyl Hydrolase; PKD Domain Containing Protein; Crp/FNR Family Transcriptional Regulator; Sigma-70 Factor; Cytochrome C Class I; LOW QUALITY PROTEIN Sigma-70 Factor; LPXTG-Motif Cell Wall Anchor Domain Protein; Crp/Fnr Family Transcriptional Regulator; Pkd Domain Containing Protein; Glucose/Sorbosone Dehydrogenase; Class I Glutamine Amidotransferase-Like Protein
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MRDFRVVWAMIAMCGVCMAQAPGRGAAPVAPPANGKKRILVIGQTKGFQHDSVPVAMANIWKWGHDTGLWEAYLRTDTEL ITRKKLEANAKTLPNFDAIVFASSTGELDLSDEQKADLLAFVHDDGKGYVGVHASNDANYKWNEWALLTGGWFDQHPWNT FEAPIISEDSEFPATRHFPKAFMKRDEIYQLKNFSRDNVNVLLRLDETKLNYDNNPRVHREDRDFAVAYSKMYGKGRVFY STLGHTNESWDDPDIQKMYFEAIRWALGLTEGSTKSHPKR
Sequences:
>Translated_280_residues MRDFRVVWAMIAMCGVCMAQAPGRGAAPVAPPANGKKRILVIGQTKGFQHDSVPVAMANIWKWGHDTGLWEAYLRTDTEL ITRKKLEANAKTLPNFDAIVFASSTGELDLSDEQKADLLAFVHDDGKGYVGVHASNDANYKWNEWALLTGGWFDQHPWNT FEAPIISEDSEFPATRHFPKAFMKRDEIYQLKNFSRDNVNVLLRLDETKLNYDNNPRVHREDRDFAVAYSKMYGKGRVFY STLGHTNESWDDPDIQKMYFEAIRWALGLTEGSTKSHPKR >Mature_280_residues MRDFRVVWAMIAMCGVCMAQAPGRGAAPVAPPANGKKRILVIGQTKGFQHDSVPVAMANIWKWGHDTGLWEAYLRTDTEL ITRKKLEANAKTLPNFDAIVFASSTGELDLSDEQKADLLAFVHDDGKGYVGVHASNDANYKWNEWALLTGGWFDQHPWNT FEAPIISEDSEFPATRHFPKAFMKRDEIYQLKNFSRDNVNVLLRLDETKLNYDNNPRVHREDRDFAVAYSKMYGKGRVFY STLGHTNESWDDPDIQKMYFEAIRWALGLTEGSTKSHPKR
Specific function: Unknown
COG id: COG3828
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31919; Mature: 31919
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS01164 COPPER_AMINE_OXID_1 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFRVVWAMIAMCGVCMAQAPGRGAAPVAPPANGKKRILVIGQTKGFQHDSVPVAMANI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEHHHH WKWGHDTGLWEAYLRTDTELITRKKLEANAKTLPNFDAIVFASSTGELDLSDEQKADLLA HHCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEE FVHDDGKGYVGVHASNDANYKWNEWALLTGGWFDQHPWNTFEAPIISEDSEFPATRHFPK EEEECCCEEEEEEECCCCCCEECEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHH AFMKRDEIYQLKNFSRDNVNVLLRLDETKLNYDNNPRVHREDRDFAVAYSKMYGKGRVFY HHHHHHHHHHHHCCCCCCEEEEEEEECEECCCCCCCCEECCCCCCEEEEHHHCCCCEEEE STLGHTNESWDDPDIQKMYFEAIRWALGLTEGSTKSHPKR EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRDFRVVWAMIAMCGVCMAQAPGRGAAPVAPPANGKKRILVIGQTKGFQHDSVPVAMANI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEHHHH WKWGHDTGLWEAYLRTDTELITRKKLEANAKTLPNFDAIVFASSTGELDLSDEQKADLLA HHCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEE FVHDDGKGYVGVHASNDANYKWNEWALLTGGWFDQHPWNTFEAPIISEDSEFPATRHFPK EEEECCCEEEEEEECCCCCCEECEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHH AFMKRDEIYQLKNFSRDNVNVLLRLDETKLNYDNNPRVHREDRDFAVAYSKMYGKGRVFY HHHHHHHHHHHHCCCCCCEEEEEEEECEECCCCCCCCEECCCCCCEEEEHHHCCCCEEEE STLGHTNESWDDPDIQKMYFEAIRWALGLTEGSTKSHPKR EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA