| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621976
Identifier: 116621976
GI number: 116621976
Start: 3622391
End: 3623242
Strand: Direct
Name: 116621976
Synonym: Acid_2861
Alternate gene names: NA
Gene position: 3622391-3623242 (Clockwise)
Preceding gene: 116621972
Following gene: 116621977
Centisome position: 36.35
GC content: 57.75
Gene sequence:
>852_bases GTGAAATCCTGGGTCGTACTCATCTCCGCGTCAGTCATTCTGTCGGCTTCGGGTCCGGATCTCGAACGTGCGCGTAAGCT GTATAACCTCACCGAGTTCGAGCAGTCTCTTCAAGTTCTACATTCAATCCCGGAAAAGGATGGCCAAGTCTGGGAACTGA TCGGCCGCAACTATTACGGCGAAGGCGATTTCAAGAAGGCCACCGAATCGCTCGAAAAAGCCGTTGCCGCCCAGCCTCGC AGCTCCGAAACCTACCTCTGGCTTGGTAGGGCCTATGGACGGCGTGCCGAAACATCAAACCCCATTACCGCTCCCGGCTA CGCTTCCAAAGCGCGCCAGAATTTCGAGCGGGCCACGCAGCTAAACCCCGATAATCTGGATGCTCAGAGCGATTTATTCG AGTATTACCTTGAGGCTCCTGGCTTCCTCGGCGGCGGTCTCGAAAAGGCCCGCGCCACCGCCGATCAAATGTCCCGTATC AATCCCGCTGAGGGACATTGGGCCTTGGCCAAGCTCGCCGAAAAACGTAAAGAATACTCCAGCGCAGAAGACCAGCTCCG CCGCGCCATCGAGGCCGCCCCCCACCAGGTGGGCCGCTTCATTGATCTGGCTCGCCTGTTCACGAAACAGGGACGCTATC AGGAGGCCGACCAGAGCTTGGCGAAGGCCGAACAGATCGCTCCCAATAGCCCCAAGTTGATCTTCGCCAAGGCAGATCTT TACATCAAAAGCAAGCGGAATCTTGGCGTTGCACGCGAACTCCTGAAGAAATACCTGAGCCTCGCTTTGACCCCTGACGA CCCGTCGCGGTCGGAGGCCGAGAAGCTGCTCAAGCAGGTGCAGGGCAGCTAA
Upstream 100 bases:
>100_bases TTTCCACGCGTCTTCGAATAGACGCCCCTGAATCTGAAACTCGCGGGCATCCGTACTCATCTATGTAGTTGAAGTAAAAT GGAAAGTGAGCGTTGCTTTG
Downstream 100 bases:
>100_bases GCCCAGCCCATGTTCCTCGGCGAAGCGGTCCGGTTCAGCGCGCAGGCGTTGCGCGCCAGTCCTGTCCGTTCGCTGCTCAC CGGGCTCGGCATGGCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKSWVVLISASVILSASGPDLERARKLYNLTEFEQSLQVLHSIPEKDGQVWELIGRNYYGEGDFKKATESLEKAVAAQPR SSETYLWLGRAYGRRAETSNPITAPGYASKARQNFERATQLNPDNLDAQSDLFEYYLEAPGFLGGGLEKARATADQMSRI NPAEGHWALAKLAEKRKEYSSAEDQLRRAIEAAPHQVGRFIDLARLFTKQGRYQEADQSLAKAEQIAPNSPKLIFAKADL YIKSKRNLGVARELLKKYLSLALTPDDPSRSEAEKLLKQVQGS
Sequences:
>Translated_283_residues MKSWVVLISASVILSASGPDLERARKLYNLTEFEQSLQVLHSIPEKDGQVWELIGRNYYGEGDFKKATESLEKAVAAQPR SSETYLWLGRAYGRRAETSNPITAPGYASKARQNFERATQLNPDNLDAQSDLFEYYLEAPGFLGGGLEKARATADQMSRI NPAEGHWALAKLAEKRKEYSSAEDQLRRAIEAAPHQVGRFIDLARLFTKQGRYQEADQSLAKAEQIAPNSPKLIFAKADL YIKSKRNLGVARELLKKYLSLALTPDDPSRSEAEKLLKQVQGS >Mature_283_residues MKSWVVLISASVILSASGPDLERARKLYNLTEFEQSLQVLHSIPEKDGQVWELIGRNYYGEGDFKKATESLEKAVAAQPR SSETYLWLGRAYGRRAETSNPITAPGYASKARQNFERATQLNPDNLDAQSDLFEYYLEAPGFLGGGLEKARATADQMSRI NPAEGHWALAKLAEKRKEYSSAEDQLRRAIEAAPHQVGRFIDLARLFTKQGRYQEADQSLAKAEQIAPNSPKLIFAKADL YIKSKRNLGVARELLKKYLSLALTPDDPSRSEAEKLLKQVQGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31635; Mature: 31635
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSWVVLISASVILSASGPDLERARKLYNLTEFEQSLQVLHSIPEKDGQVWELIGRNYYG CCCEEEEEEHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC EGDFKKATESLEKAVAAQPRSSETYLWLGRAYGRRAETSNPITAPGYASKARQNFERATQ CCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC LNPDNLDAQSDLFEYYLEAPGFLGGGLEKARATADQMSRINPAEGHWALAKLAEKRKEYS CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC SAEDQLRRAIEAAPHQVGRFIDLARLFTKQGRYQEADQSLAKAEQIAPNSPKLIFAKADL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCE YIKSKRNLGVARELLKKYLSLALTPDDPSRSEAEKLLKQVQGS EEECCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKSWVVLISASVILSASGPDLERARKLYNLTEFEQSLQVLHSIPEKDGQVWELIGRNYYG CCCEEEEEEHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC EGDFKKATESLEKAVAAQPRSSETYLWLGRAYGRRAETSNPITAPGYASKARQNFERATQ CCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC LNPDNLDAQSDLFEYYLEAPGFLGGGLEKARATADQMSRINPAEGHWALAKLAEKRKEYS CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC SAEDQLRRAIEAAPHQVGRFIDLARLFTKQGRYQEADQSLAKAEQIAPNSPKLIFAKADL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCE YIKSKRNLGVARELLKKYLSLALTPDDPSRSEAEKLLKQVQGS EEECCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA