Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116621897

Identifier: 116621897

GI number: 116621897

Start: 3526041

End: 3526724

Strand: Direct

Name: 116621897

Synonym: Acid_2782

Alternate gene names: NA

Gene position: 3526041-3526724 (Clockwise)

Preceding gene: 116621896

Following gene: 116621899

Centisome position: 35.38

GC content: 60.09

Gene sequence:

>684_bases
ATGAAAATGAAACAGATAGTCCCAACGGCGCTAGTGCTTGGCTTCCTGGCACAAGCGCAAGGAACGAATGCCCCGTACGC
AAGCATGGCCGCGCTCGACCGATACCTGATTGCGGACCGCGATGCCGAAATAATCCTGGCGAAAAGCGCAGCGCCAAGTG
CTATCTCGGACAACGCCGACGTCATGGTTCTGGAACGGCAAGGGTACAAAACAGCAGCTAAAGGCACGAACGGTTTCGTG
TGCATGGTGGAACGCTCGTGGACGGCGCCGTTCGGGGACCCTGAGTTTTGGAATCCCAAGATTCGCGGACCGATCTGCTT
CAACCCGCCGGCCGCGCGAACGTACCTCCCCATCACGATCTCCAGAACCCAGTTGGCCCTGGCGGGGAAGTCGGAAATCC
AGATGCGTGACGCGATCAACTCCGCTCTGGACAAAAGGGAGTTGCCTGCGCTCGAAGCGGGCGCCATGTGCTACATGCTC
TCGAAGCAGGGCTACCTGGGGGATCGGGCCGGGCATTTCCATCCGCACCTGATGTTCTGGGTGGAGCGAACGAAACTCGA
ATCCTGGGGCGCGGGGATGGCGGGCTCTCCCATCATTGGCGCAGAGGAGATTCCGGGCCGGTTAACGATCTTCATCGTCC
CGGTCGGCAAGTGGTCCGACGGCACGTCGGATTCCCACGACTAA

Upstream 100 bases:

>100_bases
TTTTTTGAGACTTGTCGAATTCTCCATTCCCGAAACGATTACGAGATGAGCAAGCGTATTGGATACGCCTGACGGAGAAC
CTGGGAGGACTGAAAGGAGT

Downstream 100 bases:

>100_bases
GGATGACGTCGATCCGCCTCGCGGGCACATCACGCGCTACTCGGAGATAACCGTCCTCCAGCGCCGCCCAGAACTCGAGA
AGTAATGTGAAAGTGCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKMKQIVPTALVLGFLAQAQGTNAPYASMAALDRYLIADRDAEIILAKSAAPSAISDNADVMVLERQGYKTAAKGTNGFV
CMVERSWTAPFGDPEFWNPKIRGPICFNPPAARTYLPITISRTQLALAGKSEIQMRDAINSALDKRELPALEAGAMCYML
SKQGYLGDRAGHFHPHLMFWVERTKLESWGAGMAGSPIIGAEEIPGRLTIFIVPVGKWSDGTSDSHD

Sequences:

>Translated_227_residues
MKMKQIVPTALVLGFLAQAQGTNAPYASMAALDRYLIADRDAEIILAKSAAPSAISDNADVMVLERQGYKTAAKGTNGFV
CMVERSWTAPFGDPEFWNPKIRGPICFNPPAARTYLPITISRTQLALAGKSEIQMRDAINSALDKRELPALEAGAMCYML
SKQGYLGDRAGHFHPHLMFWVERTKLESWGAGMAGSPIIGAEEIPGRLTIFIVPVGKWSDGTSDSHD
>Mature_227_residues
MKMKQIVPTALVLGFLAQAQGTNAPYASMAALDRYLIADRDAEIILAKSAAPSAISDNADVMVLERQGYKTAAKGTNGFV
CMVERSWTAPFGDPEFWNPKIRGPICFNPPAARTYLPITISRTQLALAGKSEIQMRDAINSALDKRELPALEAGAMCYML
SKQGYLGDRAGHFHPHLMFWVERTKLESWGAGMAGSPIIGAEEIPGRLTIFIVPVGKWSDGTSDSHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24687; Mature: 24687

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKQIVPTALVLGFLAQAQGTNAPYASMAALDRYLIADRDAEIILAKSAAPSAISDNAD
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
VMVLERQGYKTAAKGTNGFVCMVERSWTAPFGDPEFWNPKIRGPICFNPPAARTYLPITI
EEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEE
SRTQLALAGKSEIQMRDAINSALDKRELPALEAGAMCYMLSKQGYLGDRAGHFHPHLMFW
ECEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE
VERTKLESWGAGMAGSPIIGAEEIPGRLTIFIVPVGKWSDGTSDSHD
EEEHHHHHCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKMKQIVPTALVLGFLAQAQGTNAPYASMAALDRYLIADRDAEIILAKSAAPSAISDNAD
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
VMVLERQGYKTAAKGTNGFVCMVERSWTAPFGDPEFWNPKIRGPICFNPPAARTYLPITI
EEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEE
SRTQLALAGKSEIQMRDAINSALDKRELPALEAGAMCYMLSKQGYLGDRAGHFHPHLMFW
ECEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE
VERTKLESWGAGMAGSPIIGAEEIPGRLTIFIVPVGKWSDGTSDSHD
EEEHHHHHCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA