| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621894
Identifier: 116621894
GI number: 116621894
Start: 3521875
End: 3523377
Strand: Direct
Name: 116621894
Synonym: Acid_2779
Alternate gene names: NA
Gene position: 3521875-3523377 (Clockwise)
Preceding gene: 116621893
Following gene: 116621896
Centisome position: 35.34
GC content: 62.87
Gene sequence:
>1503_bases ATGAGGCTGCTGTGCGCCTTGGCCCTCATCTCCGCGGCGCTGCGCGCGCAGACGATCGAGGGCACAGCCACGGACGCGCT TACCGGCTTGCCAGTACCGGGCGCCGCGATCCAACTCTATAAGACCGGCGGGATGCCTGCTCGCGAGGCTGTCACTGATA GCCGGGGACATTTCCGCATCGAGGGCCTCACGGAAGGCGGCTACTTCGCGCTGATCCGCAAGGAGGGCTACAGCAACGAC GACGCCAATAAGACCGCGGGCCAGCACTTCCATTTGTCGAAGGACGAGACGGTTCGCCTTGAAGCGAGTATGGCGCCCCT CGGCAAGGTATCCGGCCGCGTGCTGGGAACGAACGAGTTCCCCATTTCCGGCGCCCGCGTGCTGCTAAGGGGAGTAGACA AGTGGAACTCTTCCTCCGCCACCACCGACCGGAGCGGTGCTTTCATTTTGAAGGACGTGGAACCGGGAATGTACGTTCTC ATCGCTCAGACCTCCACAGAGCCGCCCGACGAGCACTTGGCCTACGTCACCACCTACTATCCATCGGTTTATTTTCGGGA AGGAGGCGCAACGATCATCGTCGGCGCAGGAGCGGAGCTTGTGGGCGAAGACATCCGCCTGCGCACAGCTCCTGCGTGGC GCCTGCGTGGCCGGCTGGTCGCACCGTCCGGGGATCCGGCGTCCGGAGCGGCCACCGTGAATGCCACGTCGGACACTGAG AGCTCGTTGGAACCCGAGATCGTGGCAGCGCGCGCTCTCTCCGATGGCAGGTTCGAATTCCCCCGCCTGCACCGCGGCCG ATGGTCTGTGACCGCTGTCGCACCGCCCGCCGGCGCAGCCTTTCGCCAGGTCGAAGTCGTGGACAGGGACATCGACGAAT GGGAAATCCGTCTCGCCGAGCCTTTCACCCTGAACGTGAAAATCGTCCGCGATCCGCCACCGGCCAATCCGCAGTCAAAG ACCCAGATGCGGGTTTTTCTGATCGGCGGGGGCAACCGCGATATGAGGGAAGGCAGCATCGACGCGAAGGGTGAATTCCC AGTGACTCGTGTGATGGAGGGTCAATACCGCATCGTGCCGCTACTGGGTGATACATCTTCGATGCTTTCCTACTACCTCG CTTCGATCCGCGTGATGGAGCGGGAAGTGCTTGGCGAAACCGTGGAGTTGACCGCGGGCTCGCGCCTCGTTACGATTCTC TACAAAGCCGATGGCGGGGGCGTCCGCGGCACGGTGCAAGACTGCGGTTCCGCGCACGTGATTCTGGTGCCGCAAGAGCG CACTCTGCGGAGCTTGAGTGATTTGGTCAGGCAAGCAACCTGCGATGCCGTCGGCCACTTCGAGATCGCCAATATGCGAC CCGGCGAATACTACGCATACGCATTCGGCCAGCAAACACCAATTAAGGATGTGGCCGAACTGCCGGTTAATCAAGCCGTC CCCGTCACCGTGCGCTCGGGGGAATTCTCCGGCGCCGCGCTCCGCGTTACGCCGATACGCTAG
Upstream 100 bases:
>100_bases TCGAGCGGAATGCCCGCGATGGACATAGGCTGCGCGAGAGACCTGCTGTGGGCAGGCGGCGAAACGTTACAACATCAGCT GAGAGCTATAATCGATCTCG
Downstream 100 bases:
>100_bases GATTCGTAAACGCTGCGCCGTTAGCTGGAGGCGATCGGGTCAACTTGCGAAAGTGGAACGTGGGCCGGGTCCGTTCGCTT CACCTCGAACCGGATCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MRLLCALALISAALRAQTIEGTATDALTGLPVPGAAIQLYKTGGMPAREAVTDSRGHFRIEGLTEGGYFALIRKEGYSND DANKTAGQHFHLSKDETVRLEASMAPLGKVSGRVLGTNEFPISGARVLLRGVDKWNSSSATTDRSGAFILKDVEPGMYVL IAQTSTEPPDEHLAYVTTYYPSVYFREGGATIIVGAGAELVGEDIRLRTAPAWRLRGRLVAPSGDPASGAATVNATSDTE SSLEPEIVAARALSDGRFEFPRLHRGRWSVTAVAPPAGAAFRQVEVVDRDIDEWEIRLAEPFTLNVKIVRDPPPANPQSK TQMRVFLIGGGNRDMREGSIDAKGEFPVTRVMEGQYRIVPLLGDTSSMLSYYLASIRVMEREVLGETVELTAGSRLVTIL YKADGGGVRGTVQDCGSAHVILVPQERTLRSLSDLVRQATCDAVGHFEIANMRPGEYYAYAFGQQTPIKDVAELPVNQAV PVTVRSGEFSGAALRVTPIR
Sequences:
>Translated_500_residues MRLLCALALISAALRAQTIEGTATDALTGLPVPGAAIQLYKTGGMPAREAVTDSRGHFRIEGLTEGGYFALIRKEGYSND DANKTAGQHFHLSKDETVRLEASMAPLGKVSGRVLGTNEFPISGARVLLRGVDKWNSSSATTDRSGAFILKDVEPGMYVL IAQTSTEPPDEHLAYVTTYYPSVYFREGGATIIVGAGAELVGEDIRLRTAPAWRLRGRLVAPSGDPASGAATVNATSDTE SSLEPEIVAARALSDGRFEFPRLHRGRWSVTAVAPPAGAAFRQVEVVDRDIDEWEIRLAEPFTLNVKIVRDPPPANPQSK TQMRVFLIGGGNRDMREGSIDAKGEFPVTRVMEGQYRIVPLLGDTSSMLSYYLASIRVMEREVLGETVELTAGSRLVTIL YKADGGGVRGTVQDCGSAHVILVPQERTLRSLSDLVRQATCDAVGHFEIANMRPGEYYAYAFGQQTPIKDVAELPVNQAV PVTVRSGEFSGAALRVTPIR >Mature_500_residues MRLLCALALISAALRAQTIEGTATDALTGLPVPGAAIQLYKTGGMPAREAVTDSRGHFRIEGLTEGGYFALIRKEGYSND DANKTAGQHFHLSKDETVRLEASMAPLGKVSGRVLGTNEFPISGARVLLRGVDKWNSSSATTDRSGAFILKDVEPGMYVL IAQTSTEPPDEHLAYVTTYYPSVYFREGGATIIVGAGAELVGEDIRLRTAPAWRLRGRLVAPSGDPASGAATVNATSDTE SSLEPEIVAARALSDGRFEFPRLHRGRWSVTAVAPPAGAAFRQVEVVDRDIDEWEIRLAEPFTLNVKIVRDPPPANPQSK TQMRVFLIGGGNRDMREGSIDAKGEFPVTRVMEGQYRIVPLLGDTSSMLSYYLASIRVMEREVLGETVELTAGSRLVTIL YKADGGGVRGTVQDCGSAHVILVPQERTLRSLSDLVRQATCDAVGHFEIANMRPGEYYAYAFGQQTPIKDVAELPVNQAV PVTVRSGEFSGAALRVTPIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53934; Mature: 53934
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLCALALISAALRAQTIEGTATDALTGLPVPGAAIQLYKTGGMPAREAVTDSRGHFRI CHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEE EGLTEGGYFALIRKEGYSNDDANKTAGQHFHLSKDETVRLEASMAPLGKVSGRVLGTNEF EEECCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCEEEECCCC PISGARVLLRGVDKWNSSSATTDRSGAFILKDVEPGMYVLIAQTSTEPPDEHLAYVTTYY CCCCHHEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHEEEEEEEC PSVYFREGGATIIVGAGAELVGEDIRLRTAPAWRLRGRLVAPSGDPASGAATVNATSDTE CEEEEECCCCEEEEECCHHHCCCCEEEECCCCEEECCEEECCCCCCCCCEEEEEECCCCC SSLEPEIVAARALSDGRFEFPRLHRGRWSVTAVAPPAGAAFRQVEVVDRDIDEWEIRLAE CCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHEEEEECCCCCCCEEEEEEC PFTLNVKIVRDPPPANPQSKTQMRVFLIGGGNRDMREGSIDAKGEFPVTRVMEGQYRIVP CEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEE LLGDTSSMLSYYLASIRVMEREVLGETVELTAGSRLVTILYKADGGGVRGTVQDCGSAHV EECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCEEEEHHHCCCEEE ILVPQERTLRSLSDLVRQATCDAVGHFEIANMRPGEYYAYAFGQQTPIKDVAELPVNQAV EEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCE PVTVRSGEFSGAALRVTPIR EEEEECCCCCCEEEEEEECC >Mature Secondary Structure MRLLCALALISAALRAQTIEGTATDALTGLPVPGAAIQLYKTGGMPAREAVTDSRGHFRI CHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEEE EGLTEGGYFALIRKEGYSNDDANKTAGQHFHLSKDETVRLEASMAPLGKVSGRVLGTNEF EEECCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCEEEECCCC PISGARVLLRGVDKWNSSSATTDRSGAFILKDVEPGMYVLIAQTSTEPPDEHLAYVTTYY CCCCHHEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHEEEEEEEC PSVYFREGGATIIVGAGAELVGEDIRLRTAPAWRLRGRLVAPSGDPASGAATVNATSDTE CEEEEECCCCEEEEECCHHHCCCCEEEECCCCEEECCEEECCCCCCCCCEEEEEECCCCC SSLEPEIVAARALSDGRFEFPRLHRGRWSVTAVAPPAGAAFRQVEVVDRDIDEWEIRLAE CCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHEEEEECCCCCCCEEEEEEC PFTLNVKIVRDPPPANPQSKTQMRVFLIGGGNRDMREGSIDAKGEFPVTRVMEGQYRIVP CEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEE LLGDTSSMLSYYLASIRVMEREVLGETVELTAGSRLVTILYKADGGGVRGTVQDCGSAHV EECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCEEEEHHHCCCEEE ILVPQERTLRSLSDLVRQATCDAVGHFEIANMRPGEYYAYAFGQQTPIKDVAELPVNQAV EEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCE PVTVRSGEFSGAALRVTPIR EEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA