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The map label for this gene is 116621859

Identifier: 116621859

GI number: 116621859

Start: 3480939

End: 3481679

Strand: Direct

Name: 116621859

Synonym: Acid_2742

Alternate gene names: NA

Gene position: 3480939-3481679 (Clockwise)

Preceding gene: 116621858

Following gene: 116621860

Centisome position: 34.93

GC content: 63.02

Gene sequence:

>741_bases
ATGCGCATCACTCTGTTGATGGTGCTGGGTTTAACCGTGGGCTGGGCGCAGTCGGATCCGGGAGAGGTTCTTCGGCAATG
GCTGGAGGAAGGCCGGGCAGCCGTACAGGCCGGCCAGTTCGACGCCGCGATCGCCAGGTTTCAGAAGGCGCTCGAAGCCG
TCGATGCCGATTCGGCGGCCGCCGGCGATCTCTATCTTCGCATCGGCGAGACTCAGCGCCGCAAAGGCGACCTGGATGGC
GCCATCCAATCCCTGGCTCACGCCAACGATCTTCTTCCCGGCAACGCTACCGTGGTCGGGACCCTTGCGCTCGCGCTCGA
TAGCCGCGGCAACCGTTCCGATGCGCAGCGCGCCTACCGCGCCACCATCGAGCTCGACCCGAACAACGCCATCGCCATGA
ATAATCTGGCTTTTCTGCTTGCCGAGGAGGGGACCAGCTTCGACGAAGCCCTCCAGCTCGCCCGCCACGCCATGGCTTTG
ATGCCGGATTCCATGCAGATGACCGATACCGCCGGCTGGGTGCAGCTCAAGCGCGGGGACAACGATGCCGCCATCGCGCT
ATTCTCTGACGCTGTCGCCAAAGAACCGGCCGAAGATAGCTTCCGTGATCACCTGCTCATGGCGCTCGAGCGCAAGGGTG
AGCGCGCCGGTATCTTCGGTGAGACGATCTCCGCACTCAAACAGGCGCCTTCGCCGGAAAACCTGGCGAAAGTGACTTCG
CTGCTCCAAGGATTGAAATAG

Upstream 100 bases:

>100_bases
ATTATTTTGATGATTTCGCAAAAAAGTTTTCCGCCTCAGGGGGGCTTTTCCCCGTCATCGTGATTGTGTATGCTATATCA
GCTCTGAGGGAGGGCGGGAA

Downstream 100 bases:

>100_bases
GAGCCCTAAAAAGATAATGGCCCCGAGCTGGGTACTCGGGGCCTGCACTCAGAGGGTGGCGGTGGGAGGGGACTCACCGC
CTGGGATGCTGTCTGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Domain Protein; TPR Domain-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRITLLMVLGLTVGWAQSDPGEVLRQWLEEGRAAVQAGQFDAAIARFQKALEAVDADSAAAGDLYLRIGETQRRKGDLDG
AIQSLAHANDLLPGNATVVGTLALALDSRGNRSDAQRAYRATIELDPNNAIAMNNLAFLLAEEGTSFDEALQLARHAMAL
MPDSMQMTDTAGWVQLKRGDNDAAIALFSDAVAKEPAEDSFRDHLLMALERKGERAGIFGETISALKQAPSPENLAKVTS
LLQGLK

Sequences:

>Translated_246_residues
MRITLLMVLGLTVGWAQSDPGEVLRQWLEEGRAAVQAGQFDAAIARFQKALEAVDADSAAAGDLYLRIGETQRRKGDLDG
AIQSLAHANDLLPGNATVVGTLALALDSRGNRSDAQRAYRATIELDPNNAIAMNNLAFLLAEEGTSFDEALQLARHAMAL
MPDSMQMTDTAGWVQLKRGDNDAAIALFSDAVAKEPAEDSFRDHLLMALERKGERAGIFGETISALKQAPSPENLAKVTS
LLQGLK
>Mature_246_residues
MRITLLMVLGLTVGWAQSDPGEVLRQWLEEGRAAVQAGQFDAAIARFQKALEAVDADSAAAGDLYLRIGETQRRKGDLDG
AIQSLAHANDLLPGNATVVGTLALALDSRGNRSDAQRAYRATIELDPNNAIAMNNLAFLLAEEGTSFDEALQLARHAMAL
MPDSMQMTDTAGWVQLKRGDNDAAIALFSDAVAKEPAEDSFRDHLLMALERKGERAGIFGETISALKQAPSPENLAKVTS
LLQGLK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26385; Mature: 26385

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLLMVLGLTVGWAQSDPGEVLRQWLEEGRAAVQAGQFDAAIARFQKALEAVDADSAA
CEEEHEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
AGDLYLRIGETQRRKGDLDGAIQSLAHANDLLPGNATVVGTLALALDSRGNRSDAQRAYR
CCCEEEEECCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHE
ATIELDPNNAIAMNNLAFLLAEEGTSFDEALQLARHAMALMPDSMQMTDTAGWVQLKRGD
EEEEECCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
NDAAIALFSDAVAKEPAEDSFRDHLLMALERKGERAGIFGETISALKQAPSPENLAKVTS
CCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
LLQGLK
HHHCCC
>Mature Secondary Structure
MRITLLMVLGLTVGWAQSDPGEVLRQWLEEGRAAVQAGQFDAAIARFQKALEAVDADSAA
CEEEHEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
AGDLYLRIGETQRRKGDLDGAIQSLAHANDLLPGNATVVGTLALALDSRGNRSDAQRAYR
CCCEEEEECCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHE
ATIELDPNNAIAMNNLAFLLAEEGTSFDEALQLARHAMALMPDSMQMTDTAGWVQLKRGD
EEEEECCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
NDAAIALFSDAVAKEPAEDSFRDHLLMALERKGERAGIFGETISALKQAPSPENLAKVTS
CCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
LLQGLK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA