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The map label for this gene is 116621842

Identifier: 116621842

GI number: 116621842

Start: 3453615

End: 3454910

Strand: Reverse

Name: 116621842

Synonym: Acid_2724

Alternate gene names: NA

Gene position: 3454910-3453615 (Counterclockwise)

Preceding gene: 116621843

Following gene: 116621841

Centisome position: 34.67

GC content: 64.97

Gene sequence:

>1296_bases
ATGCGGCATTACATCCTGATGACGGTTATGTTGGCCGCATCCGCCGGCGCTCAATCTACAGGCCAGCGTTGGAATCTCTA
CTGGCAGGCAACCTCCATCGGGCAATACCATCCCGGATTCGACGCTCTCTACTCGGGCGTCAATAGCCTGGCTCCGCACT
CAGAGGCCGAGGCCTCGCTGACCTCCACCCTCTTTCTGGGGCTGCGTTTCTCGCCCAATACGCAGTTCTATTTCGACCCC
GAACTGGCCGGCGGCCGGGGCTTCAGCGGAGTCACCGGCATCGCCGATGCGCCTAATGGCGAACTGCCGCGCGTGGCCTC
CGCCGCGCCCAAACCCTATGTGGCGCGCCTCTTCGTCACGCACGATTTCGGCTTCGGCGCTGACCGTGAAACCGTCGAGG
CCGATGCCAACTCGCTCGGCGGCACTCGCCCCATGACCCGCTACTCGGTCACGGTGGGCCGCTTCACCGTCACCGATTTC
TTCGACAACAACCGCTACTCGCACGATCCCCGCACTCAGTTCATGACTTGGGGCACCATGTACAACGGTGCCTGGGATTA
CCCCGCCGATACCCGCGGCTACACCTGGGGCTGGGTCCACGAATTCCACACGCGCCACTGGTCGGCCCGCTATGCCAGCG
TCGGCATGCCGCGCGTCGCCAACGGCCTGCGCTTCGACCGCCGCATCCTCGTCAATCGCGGCGACGTGGCTGAAATCGAG
TTGCGGCGCGAAACCTCGGGACACCCTGGCGCCGTCCGCACGCTGGCTTACCTGAACCACGCGCGTGCCGGCACTTATCG
CGACGCCCTTCAGATGGCCCTGCCGGACGTCACCGCGTCGCGCCGCGACGGCACCCGAAAATTCGGCTTTGGGATGACCG
CCGACCAGGAGATCACCAAGGACATCGGCGTGTTCGGCCGCCTCGGCTGGAACGACGGCAAGACCGAGAGCTTCTGCTTC
ACCGCCATCGATCGTCTGGCTTCCGCCGGCGTCTCCGTGATCGGCCAACCCTGGAAGCGCCCCCACGATACCTTCGCCAC
TGCCGTCACCGTCGCCGGCCTCTCCGCCGTCCACGCCGAGTACCTCGCGCGCGGCGGCCTGGATTTTCTGATCGGCGATG
GCGCCCTCACCTATGGCAAAGAGATCGTGTCGGAGACGTACTACGCAGCGCAGGTCTTTTCCGGCGGCTTCGTGACGCTG
GATCTGCAACACGTCACCAATCCCGCCTACAACAGGGATCGCGGCCCAGTGTGGATCGGTTCCCTCCGTCTGCATCTGGA
GTGGGGGAAGCGATGA

Upstream 100 bases:

>100_bases
GCGTGTATCTCTCCTCACCCTTCGGGCCTATCTCCTGCTGATGCTGGTCTTAGTGGTCTATCATGTACTGGAACTGGCTG
GCGTGTTCGGACATTGACTA

Downstream 100 bases:

>100_bases
TATCCTCGGTTAGGGGACTGGGATGGATTTTCCGAAGGCAGCGCGTTGGGCGGCATGCGGCGTGTTGTGCCTCGGTGCGG
TCTACGCCTTTCAGCGCCCC

Product: carbohydrate-selective porin OprB

Products: NA

Alternate protein names: OmpA-Like Transmembrane Domain-Containing Protein; Carbohydrate-Selective Porin Oprb; OmpA-Like Transmembrane Domain Protein; OmpA Domain-Containing Protein; Outer Membrane Protein A-Like; Carbohydrate-Selective Porin

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MRHYILMTVMLAASAGAQSTGQRWNLYWQATSIGQYHPGFDALYSGVNSLAPHSEAEASLTSTLFLGLRFSPNTQFYFDP
ELAGGRGFSGVTGIADAPNGELPRVASAAPKPYVARLFVTHDFGFGADRETVEADANSLGGTRPMTRYSVTVGRFTVTDF
FDNNRYSHDPRTQFMTWGTMYNGAWDYPADTRGYTWGWVHEFHTRHWSARYASVGMPRVANGLRFDRRILVNRGDVAEIE
LRRETSGHPGAVRTLAYLNHARAGTYRDALQMALPDVTASRRDGTRKFGFGMTADQEITKDIGVFGRLGWNDGKTESFCF
TAIDRLASAGVSVIGQPWKRPHDTFATAVTVAGLSAVHAEYLARGGLDFLIGDGALTYGKEIVSETYYAAQVFSGGFVTL
DLQHVTNPAYNRDRGPVWIGSLRLHLEWGKR

Sequences:

>Translated_431_residues
MRHYILMTVMLAASAGAQSTGQRWNLYWQATSIGQYHPGFDALYSGVNSLAPHSEAEASLTSTLFLGLRFSPNTQFYFDP
ELAGGRGFSGVTGIADAPNGELPRVASAAPKPYVARLFVTHDFGFGADRETVEADANSLGGTRPMTRYSVTVGRFTVTDF
FDNNRYSHDPRTQFMTWGTMYNGAWDYPADTRGYTWGWVHEFHTRHWSARYASVGMPRVANGLRFDRRILVNRGDVAEIE
LRRETSGHPGAVRTLAYLNHARAGTYRDALQMALPDVTASRRDGTRKFGFGMTADQEITKDIGVFGRLGWNDGKTESFCF
TAIDRLASAGVSVIGQPWKRPHDTFATAVTVAGLSAVHAEYLARGGLDFLIGDGALTYGKEIVSETYYAAQVFSGGFVTL
DLQHVTNPAYNRDRGPVWIGSLRLHLEWGKR
>Mature_431_residues
MRHYILMTVMLAASAGAQSTGQRWNLYWQATSIGQYHPGFDALYSGVNSLAPHSEAEASLTSTLFLGLRFSPNTQFYFDP
ELAGGRGFSGVTGIADAPNGELPRVASAAPKPYVARLFVTHDFGFGADRETVEADANSLGGTRPMTRYSVTVGRFTVTDF
FDNNRYSHDPRTQFMTWGTMYNGAWDYPADTRGYTWGWVHEFHTRHWSARYASVGMPRVANGLRFDRRILVNRGDVAEIE
LRRETSGHPGAVRTLAYLNHARAGTYRDALQMALPDVTASRRDGTRKFGFGMTADQEITKDIGVFGRLGWNDGKTESFCF
TAIDRLASAGVSVIGQPWKRPHDTFATAVTVAGLSAVHAEYLARGGLDFLIGDGALTYGKEIVSETYYAAQVFSGGFVTL
DLQHVTNPAYNRDRGPVWIGSLRLHLEWGKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47644; Mature: 47644

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHYILMTVMLAASAGAQSTGQRWNLYWQATSIGQYHPGFDALYSGVNSLAPHSEAEASL
CCHHHEEHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHH
TSTLFLGLRFSPNTQFYFDPELAGGRGFSGVTGIADAPNGELPRVASAAPKPYVARLFVT
EEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEE
HDFGFGADRETVEADANSLGGTRPMTRYSVTVGRFTVTDFFDNNRYSHDPRTQFMTWGTM
ECCCCCCCCHHHHHCHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCHHEEEEECE
YNGAWDYPADTRGYTWGWVHEFHTRHWSARYASVGMPRVANGLRFDRRILVNRGDVAEIE
ECCEECCCCCCCCCEEHHHHHHHHHHHCCHHHHCCCCHHHCCCCCCEEEEECCCCEEEEE
LRRETSGHPGAVRTLAYLNHARAGTYRDALQMALPDVTASRRDGTRKFGFGMTADQEITK
EEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHH
DIGVFGRLGWNDGKTESFCFTAIDRLASAGVSVIGQPWKRPHDTFATAVTVAGLSAVHAE
HHCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
YLARGGLDFLIGDGALTYGKEIVSETYYAAQVFSGGFVTLDLQHVTNPAYNRDRGPVWIG
HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCCEEEE
SLRLHLEWGKR
EEEEEEEECCC
>Mature Secondary Structure
MRHYILMTVMLAASAGAQSTGQRWNLYWQATSIGQYHPGFDALYSGVNSLAPHSEAEASL
CCHHHEEHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHH
TSTLFLGLRFSPNTQFYFDPELAGGRGFSGVTGIADAPNGELPRVASAAPKPYVARLFVT
EEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEE
HDFGFGADRETVEADANSLGGTRPMTRYSVTVGRFTVTDFFDNNRYSHDPRTQFMTWGTM
ECCCCCCCCHHHHHCHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCHHEEEEECE
YNGAWDYPADTRGYTWGWVHEFHTRHWSARYASVGMPRVANGLRFDRRILVNRGDVAEIE
ECCEECCCCCCCCCEEHHHHHHHHHHHCCHHHHCCCCHHHCCCCCCEEEEECCCCEEEEE
LRRETSGHPGAVRTLAYLNHARAGTYRDALQMALPDVTASRRDGTRKFGFGMTADQEITK
EEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHH
DIGVFGRLGWNDGKTESFCFTAIDRLASAGVSVIGQPWKRPHDTFATAVTVAGLSAVHAE
HHCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
YLARGGLDFLIGDGALTYGKEIVSETYYAAQVFSGGFVTLDLQHVTNPAYNRDRGPVWIG
HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCCEEEE
SLRLHLEWGKR
EEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA